FFCP PHASE1:Hg19::chr12:6308990..6309014,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=928 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1709 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000543916_5end | |||
|description=CAGE_peak_7_at_CD9_5end | |||
|id=chr12:6308990..6309014,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.92e-46;7!CL:0000586;7.92e-46;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.92e-46,7;CL:0000586,7.92e-46,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.89e-32;10!UBERON:0005564;2.89e-32;10!UBERON:0006603;3.70e-09;65!UBERON:0005795;5.57e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;6.20e-15;22!DOID:2994;6.20e-15;22!DOID:0060084;4.52e-08;3!DOID:127;4.52e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.20e-15,22;DOID:2994,6.20e-15,22;DOID:0060084,4.52e-08,3;DOID:127,4.52e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000468!5.55e-11!659;UBERON:0007023!3.52e-10!115;UBERON:0000467!9.74e-09!625;UBERON:0000480!1.22e-08!626;UBERON:0000922!2.05e-08!612;UBERON:0004121!3.47e-08!169;UBERON:0000924!1.39e-07!173;UBERON:0006601!1.39e-07!173;UBERON:0003076!3.57e-07!15;UBERON:0003057!3.57e-07!15;UBERON:0000073!6.54e-07!94;UBERON:0001016!6.54e-07!94;UBERON:0002050!7.18e-07!605;UBERON:0005423!7.18e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.52e-40;8!UBERON:0003135;2.20e-29;11!UBERON:0003133;3.92e-17;44!UBERON:0000991;1.26e-15;21!UBERON:0003101;6.20e-15;22!UBERON:0000079;6.20e-15;22!UBERON:0000995;3.49e-11;17!UBERON:0003975;1.35e-10;18!UBERON:0005156;2.75e-09;59!UBERON:0000990;2.75e-09;59!UBERON:0004175;3.59e-09;21!UBERON:0000922;1.41e-08;49!UBERON:0002323;3.81e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.52e-40,8;UBERON:0003135,2.20e-29,11;UBERON:0003133,4.11e-20,48;UBERON:0005156,2.46e-16,59;UBERON:0000990,2.46e-16,59;UBERON:0000991,1.26e-15,21;UBERON:0009196,1.26e-15,21;UBERON:0009117,1.26e-15,21;UBERON:0005564,1.26e-15,21;UBERON:0004176,6.20e-15,22;UBERON:0003101,6.20e-15,22;UBERON:0000079,6.20e-15,22;UBERON:0000995,3.64e-09,21;UBERON:0005795,8.94e-09,22;UBERON:0003975,8.94e-09,22;UBERON:0004175,8.61e-08,25;UBERON:0002323,2.57e-07,46;UBERON:0004458,6.94e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0.37129905888014,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.43917392846563,0.72038491523742,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0.71153252537342,0,0,0.760272105718513,0.24406205754817,0.735326160691737,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0.936480230490962,0,1.04614076386261,0,0,0,0.61246251376468,0.368502951935304,0.723280468230358,0,0,0,0,0.168336113954066,0.125118519871964,0.554128230968366,0,0,0,0,0,0.427114777637135,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0.276149695926898,0.161646056818812,0,0,0,0.386521706326594,0.272746120590835,0,0.853815942907168,0.265059536642971,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.439001141634502,0,0.301586917234893,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0,0.570762456703795,0,0,0,0.234004265139238,0,0,0,0.708875486211932,0.0895585227028483,0.290633938513962,0,0.492663237895943,0.088048434013226,0.414656231081544,0.144119953416961,0,0,0,0,0,0.205654985406647,0.300343057843917,0,0.336393253036082,0.43596006883328,0.4400297149257,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,0,0,0.207970861530807,0.535286966391485,0.630809660135739,0.468565659970853,0,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0.511707249066704,0.64341568457443,0,0.308419387605311,0.355123450626254,0.164254312027618,0,0.116210378459959,0,0,0,0.68888668898764,0.182091168006717,0,0,0,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.495854746082934,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0.75894634753143,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.721346064882224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552896299656123,0.295547618953547,0.219385397153973,0,0,1.07730361905316,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.404406797884062,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.695052375913368,0,0,0,0,0,0,0,0,2.77695581336209,0,0,0.17472666824203,0,0,0,0,0.872901148395775,0,0.225980740780532,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.837847203816763,0,0,0.399358000997982,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.482259445395058,0.962776056180637,0.415440338029185,0.2249738915515,0,0.182248669974074,0,0.472834243795189,0.577000469484979,0.422401346077626,0,0,0,0,0.25426853765475,0.542999601753713,6.91377192961014,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.887432412294818,0.434674820589684,0.276697269872462,0,0,0,0,0,0.434763085832475,0,0.467426619694449,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0,0.761610424337591,0.406870733204662,0,0.214821114084977,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0.862598491173454,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.484426936895553,0,0,0.11796972334774,0,0,0,0,0.596748666348824,0.0752103283492573,0,0.781514011233092,0,0.655087670040387,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0,0,0.39246546425257,0,0.280272163313789,0,0,0,0.500335809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| |||
|short_description=p7@CD9 | |||
}} |
Revision as of 11:37, 11 January 2014
Short description: | p7@CD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CD9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000543916_5end |
EntrezGene: | CD9 |
HGNC: | 1709 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.92e-46 | 7 |
germ cell | 7.92e-46 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.52e-40 | 8 |
male reproductive organ | 2.20e-29 | 11 |
reproductive organ | 4.11e-20 | 48 |
reproductive structure | 2.46e-16 | 59 |
reproductive system | 2.46e-16 | 59 |
gonad | 1.26e-15 | 21 |
indifferent external genitalia | 1.26e-15 | 21 |
indifferent gonad | 1.26e-15 | 21 |
gonad primordium | 1.26e-15 | 21 |
external genitalia | 6.20e-15 | 22 |
male organism | 6.20e-15 | 22 |
male reproductive system | 6.20e-15 | 22 |
uterus | 3.64e-09 | 21 |
embryonic uterus | 8.94e-09 | 22 |
internal female genitalia | 8.94e-09 | 22 |
internal genitalia | 8.61e-08 | 25 |
body cavity | 2.57e-07 | 46 |
body cavity or lining | 6.94e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.20e-15 | 22 |
germ cell cancer | 6.20e-15 | 22 |
cell type benign neoplasm | 4.52e-08 | 3 |
leiomyoma | 4.52e-08 | 3 |