FFCP PHASE1:Hg19::chr12:48592134..48592150,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643162 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK125945_5end | |||
|coexpression_cluster_id=C451 | |||
|description=CAGE_peak_1_at_DKFZP779L1853_5end | |||
|id=chr12:48592134..48592150,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.18e-41!140;CL:0000037!3.69e-40!172;CL:0000566!3.69e-40!172;CL:0000988!3.27e-38!182;CL:0002032!1.00e-37!165;CL:0000837!1.00e-37!165;CL:0002031!1.64e-36!124;CL:0002087!1.34e-33!119;CL:0000766!7.38e-25!76;CL:0000763!4.32e-24!112;CL:0000049!4.32e-24!112;CL:0000557!1.61e-22!71;CL:0000839!4.19e-22!70;CL:0002057!8.06e-22!42;CL:0002009!7.17e-21!65;CL:0002194!5.20e-20!63;CL:0000576!5.20e-20!63;CL:0000040!5.20e-20!63;CL:0000559!5.20e-20!63;CL:0000860!1.02e-19!45;CL:0000838!4.40e-13!52;CL:0000542!2.72e-12!53;CL:0000051!2.72e-12!53;CL:0000791!2.37e-10!18;CL:0000789!2.37e-10!18;CL:0002420!2.37e-10!18;CL:0002419!2.37e-10!18;CL:0000790!2.37e-10!18;CL:0000084!2.86e-09!25;CL:0000827!2.86e-09!25;CL:0000625!4.20e-07!11;CL:0000134!7.53e-07!358;CL:0002393!8.02e-07!9;CL:0002397!8.02e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.86e-17;33!CL:0002057;6.86e-17;33!CL:0000576;1.15e-16;48!CL:0000473;1.33e-15;39!CL:0000234;1.33e-15;39!CL:0000766;3.03e-13;69!CL:0002087;4.51e-12;104!CL:0000791;1.16e-11;18!CL:0000789;1.16e-11;18!CL:0002419;1.16e-11;18!CL:0000084;6.76e-11;25!CL:0000738;1.72e-10;136!CL:0000542;5.38e-09;53!CL:0000763;3.59e-08;100!CL:0000988;6.11e-08;177!CL:0000625;7.65e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.97e-49,136;CL:0000037,1.14e-45,168;CL:0002031,1.11e-43,120;CL:0000988,2.43e-43,177;CL:0002032,6.85e-43,161;CL:0000837,6.85e-43,161;CL:0002087,1.37e-40,115;CL:0000766,1.79e-30,72;CL:0000557,9.55e-28,67;CL:0000839,2.91e-27,66;CL:0000763,5.18e-27,108;CL:0000049,5.18e-27,108;CL:0002009,6.89e-26,61;CL:0000473,1.34e-25,48;CL:0000234,1.34e-25,48;CL:0002194,6.92e-25,59;CL:0000576,6.92e-25,59;CL:0000040,6.92e-25,59;CL:0000559,6.92e-25,59;CL:0000860,1.06e-24,42;CL:0002057,1.06e-24,42;CL:0000838,8.16e-15,52;CL:0000542,3.70e-14,53;CL:0000051,3.70e-14,53;CL:0000791,1.34e-11,18;CL:0000789,1.34e-11,18;CL:0002420,1.34e-11,18;CL:0002419,1.34e-11,18;CL:0000790,1.34e-11,18;CL:0000084,1.14e-10,25;CL:0000827,1.14e-10,25;CL:0000625,6.80e-08,11;CL:0002393,1.42e-07,9;CL:0002397,1.42e-07,9;CL:0000134,4.26e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;6.31e-18;42!CL:0000790;1.16e-11;18!CL:0000051;5.38e-09;53!CL:0000049;2.12e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.48e-29!102;UBERON:0003061!4.48e-29!102;UBERON:0002193!1.16e-24!112;UBERON:0002371!8.80e-21!80;UBERON:0001474!6.69e-17!86;UBERON:0007023!4.11e-16!115;UBERON:0002405!2.30e-13!115;UBERON:0004765!5.07e-12!101;UBERON:0001434!5.07e-12!101;UBERON:0001049!1.33e-07!57;UBERON:0005068!1.33e-07!57;UBERON:0006241!1.33e-07!57;UBERON:0007135!1.33e-07!57;UBERON:0000178!6.90e-07!15;UBERON:0000179!6.90e-07!15;UBERON:0000463!6.90e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.61e-07;15!UBERON:0000179;1.61e-07;15!UBERON:0000463;1.61e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.17e-34,98;UBERON:0003061,1.17e-34,98;UBERON:0002193,1.39e-29,108;UBERON:0002371,4.63e-25,76;UBERON:0002405,4.69e-23,93;UBERON:0001474,6.55e-21,82;UBERON:0007023,1.06e-16,114;UBERON:0004765,2.08e-16,90;UBERON:0001434,1.34e-13,100;UBERON:0003081,4.41e-09,203;UBERON:0001049,5.23e-08,56;UBERON:0005068,5.23e-08,56;UBERON:0006241,5.23e-08,56;UBERON:0007135,5.23e-08,56;UBERON:0000178,1.20e-07,15;UBERON:0000179,1.20e-07,15;UBERON:0000463,1.20e-07,15;UBERON:0000073,1.31e-07,53;UBERON:0002616,1.31e-07,53 | |||
|phase1_expression=0.54503513781167,1.92690471501885,0.845726424575827,0,1.78784437770915,0.872338524100369,2.53299878168311,1.26343974685366,1.56711376919903,0.245733936501509,0.697801167972428,2.40285509343189,1.31883489114227,0.123766352960047,0.331397375727916,1.34465029290355,0,0,0.487932798790507,1.60057375499824,1.22400414746552,0.940364164434263,1.14494394852423,0.547497700291537,0.87879847716362,3.36218985290986,1.88831355734875,2.59745578335141,3.93364276848904,3.83829398097213,4.18003532953405,0,1.8072355126695,1.84877005083394,1.62681121218633,0,4.40400659002271,8.86392653651004,5.41470008169383,9.76548918221333,10.9718582377563,11.0123846446453,14.6818073551486,3.92575244704825,2.26725566213286,6.30718559088322,3.48643555358527,2.87817521615278,8.981484755958,18.9876978932619,29.7146419573757,39.7290146212823,5.86067657252252,4.51839278508678,8.12558919566051,3.01187743268168,1.91034305040492,5.16864014223695,4.59125838556354,3.20929027076094,8.31138263538754,18.4716728104561,23.1377842841093,25.5734850319616,5.5139755339431,5.10646702222026,10.5879782329248,16.8336605722018,25.0311800841697,32.5783267057675,4.84319602106695,6.2607198117886,7.59509729858123,8.23895616616573,14.669696697588,14.6761051855863,6.73971786878971,2.55300717830561,5.6253955343978,15.3906881620274,9.54800050555633,13.1518190710536,1.75996244461323,6.55366333514558,2.66852776159066,5.9742231159311,4.40435585739614,6.8970292794538,3.96626923670917,7.63243003628291,12.5226853204079,5.28513470433845,3.44045905312706,6.60856642895129,6.72610275577843,2.37045676297569,7.86839080455332,8.25322601773246,16.4481199199607,4.68122187093899,13.6887351986108,16.5706732007157,9.74133642039557,4.2335973616366,10.900418576569,8.86135578334484,11.1029584143656,3.71464827204458,4.29195846947598,2.46656856905514,2.76350017785848,2.60822777161547,11.4180653634787,12.5744189202165,10.4535523804977,2.71942422474159,13.4127172760672,13.4014703738226,13.4100436770337,12.7426165729639,7.81300144627702,4.75226022224187,6.47473012034423,8.95906278080929,3.74792179657038,7.10331756132051,5.74789597844733,11.6931911070345,7.2208852861547,11.4411279067411,0,0,0.255725123687061,1.0843174571537,0.50133791063589,1.01392563272577,0,0.973269740605272,1.22895262313288,0.665188192387692,0.527008714158756,3.07800827419625,0.364295288292542,1.48313777113772,5.8418530857843,2.61194605948901,1.46253756570752,1.19245312152671,3.43196946468077,1.11437250398869,0.596287222100115,0,0.347140501607594,0,0.419499436209906,0,0.626984899610432,0.258416759169329,0,0.33472061276467,0.402829317109147,1.52054421143703,0.488124115096339,0,0,0.714397826272638,0.22452937262617,0.788280363383256,0,1.89853131913626,0.549605231791222,10.5424333948851,7.75560528296651,0.436094052142534,0,0.12663051166458,2.91300197789081,1.14734648299525,0,2.24271040056923,0,0.24666754841716,1.24484414159907,0.808264032418128,0.326923806226917,0.605429710579726,0,0.937285727335186,0,0,0,1.17434498643765,0.971237666208789,0.140450806702248,0.816616685019573,0.245668634623536,0.929932030581889,0,0,0.910161361938026,0,1.17835279767846,1.87677779807946,0.831192346452549,0,0.919463387397059,0.751190294532984,0,1.4351170855109,1.2813443329114,0.423863802319124,2.10063767259082,0.824420233907511,1.28820270022815,0.558350568994769,1.68776332241266,0.68205903612839,1.7670364197088,1.01254888506529,1.13152239773168,1.42003837006646,0.806016785821122,0.67824236924195,0.57978255948989,0,1.14721838155602,1.21973706129595,0.927708378250397,1.85910308591229,1.7622379352613,1.26160425437814,0,1.56449532329816,0.643240938192885,2.76269842704961,0.928735856063958,1.44375896333917,0.591534000199219,0.505754070234305,0.723033089650446,0.55146986366197,0.435758888184812,0,0,0,0,2.21446636387394,0,1.6462960453256,5.88034845542168,0,0,0.590789906681404,3.5317047953172,4.42758378755209,0,0.329250856225877,3.37205259772859,0.201057944823262,0.277765335475589,1.3032332212413,1.03993478527958,0,1.04337364477569,0.352226082707465,0.144366447761074,0,0.190254152234598,1.58040879591855,1.71697232418975,3.69325509131096,4.91408956792399,4.60756603095058,0,0,0.567100388969546,0.0895585227028483,0.290633938513962,1.15014803749563,1.47798971368783,2.20121085033065,7.67114027500857,14.5561152951131,9.84690980725764,0.952468414382536,1.90994212779139,5.86087236050235,1.71072446022705,1.33675740514321,1.50171528921959,0.857479297891735,0.336393253036082,0.43596006883328,0.1466765716419,0.258543431515556,3.57656445851882,0,0,0,1.54324424557285,2.83698264046557,1.0656887160644,0.285955987316295,3.25572963234866,1.64648067356154,0,0.710783897485092,0.791951872933429,1.50719688529793,0,1.29964888536674,3.64871341923571,3.01354254859276,0,0.239624855491583,0,0,0.144781306667579,0,0.537182889719687,1.2329365839288,13.595122453933,10.5657511681163,17.0696238252065,0.508189248444927,0,0,0.502548796003046,0,5.24304916763028,2.99161459204025,2.07207756718018,0.36807447515742,0.500170521059677,0,0,0.713715955188647,0.473107245101804,0.23428282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| |||
|short_description=p1@DKFZP779L1853 | |||
}} |
Revision as of 13:14, 11 January 2014
Short description: | p1@DKFZP779L1853 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DKFZP779L1853_5end |
Coexpression cluster: | C451_CD14_CD4_Eosinophils_Neutrophils_adult_Natural_CD8 |
Association with transcript: | 0bp_to_AK125945_5end |
EntrezGene: | DKFZP779L1853 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.17e-34 | 98 |
blood island | 1.17e-34 | 98 |
hemolymphoid system | 1.39e-29 | 108 |
bone marrow | 4.63e-25 | 76 |
immune system | 4.69e-23 | 93 |
bone element | 6.55e-21 | 82 |
adult organism | 1.06e-16 | 114 |
skeletal element | 2.08e-16 | 90 |
skeletal system | 1.34e-13 | 100 |
lateral plate mesoderm | 4.41e-09 | 203 |
neural tube | 5.23e-08 | 56 |
neural rod | 5.23e-08 | 56 |
future spinal cord | 5.23e-08 | 56 |
neural keel | 5.23e-08 | 56 |
blood | 1.20e-07 | 15 |
haemolymphatic fluid | 1.20e-07 | 15 |
organism substance | 1.20e-07 | 15 |
regional part of nervous system | 1.31e-07 | 53 |
regional part of brain | 1.31e-07 | 53 |