FFCP PHASE1:Hg19::chr12:58087901..58087947,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10956 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16994 | |||
|TSSclassifier=strong | |||
|UniProt=G3XA88,Q13438,E9PEY5,A6NLB2,B4E321,E7ENT8,E7EW91,F8W1V2,F8VZI7,F8VWQ2,F8VUH2,F8W0R2,F8W1N0 | |||
|association_with_transcript=0bp_to_ENST00000257966,ENST00000315970,ENST00000389142,ENST00000389146,ENST00000413095,ENST00000435406,ENST00000439210,ENST00000547079,ENST00000550372,ENST00000550793,ENST00000550848,ENST00000551035,ENST00000551285,ENST00000552423,ENST00000552787,ENST00000553208_5end | |||
|description=CAGE_peak_1_at_OS9_5end | |||
|id=chr12:58087901..58087947,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.41e-25!76;CL:0002009!6.04e-21!65;CL:0000557!2.03e-20!71;CL:0002194!2.04e-20!63;CL:0000576!2.04e-20!63;CL:0000040!2.04e-20!63;CL:0000559!2.04e-20!63;CL:0000839!3.41e-19!70;CL:0002057!4.33e-18!42;CL:0000860!4.84e-16!45;CL:0002320!5.84e-12!365;CL:0000134!5.22e-11!358;CL:0000048!1.90e-08!430;CL:0000763!2.81e-08!112;CL:0000049!2.81e-08!112;CL:0000723!1.23e-07!436;CL:0000219!1.68e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.81e-15;33!CL:0002057;1.81e-15;33!CL:0000473;2.08e-15;39!CL:0000234;2.08e-15;39!CL:0000576;2.40e-12;48!CL:0000766;6.65e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.80e-26,72;CL:0002009,2.59e-22,61;CL:0002194,8.59e-22,59;CL:0000576,8.59e-22,59;CL:0000040,8.59e-22,59;CL:0000559,8.59e-22,59;CL:0000557,1.23e-21,67;CL:0000473,5.82e-21,48;CL:0000234,5.82e-21,48;CL:0000839,2.35e-20,66;CL:0000860,4.33e-18,42;CL:0002057,4.33e-18,42;CL:0002320,1.43e-12,361;CL:0000134,1.35e-11,354;CL:0000048,4.36e-09,427;CL:0000763,1.36e-08,108;CL:0000049,1.36e-08,108;CL:0000723,3.09e-08,433;CL:0000219,5.94e-08,386;CL:0000034,5.65e-07,441;CL:0000738,6.47e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;2.01e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.59e-22!115;UBERON:0002371!1.67e-19!80;UBERON:0001474!1.09e-18!86;UBERON:0004765!1.66e-17!101;UBERON:0001434!1.66e-17!101;UBERON:0002193!1.93e-14!112;UBERON:0002390!7.68e-14!102;UBERON:0003061!7.68e-14!102;UBERON:0002384!1.11e-11!375;UBERON:0002204!8.65e-11!167;UBERON:0000062!5.68e-10!511;UBERON:0003081!3.96e-09!216;UBERON:0000468!2.19e-08!659;UBERON:0000926!5.77e-08!448;UBERON:0004120!5.77e-08!448;UBERON:0006603!5.77e-08!448;UBERON:0000480!4.13e-07!626;UBERON:0000467!5.97e-07!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.56e-20,76;UBERON:0001474,1.32e-19,82;UBERON:0004765,3.40e-19,90;UBERON:0002405,8.55e-19,93;UBERON:0001434,2.61e-18,100;UBERON:0002193,5.52e-15,108;UBERON:0002390,2.05e-14,98;UBERON:0003061,2.05e-14,98;UBERON:0002384,2.82e-12,371;UBERON:0002204,1.89e-11,167;UBERON:0003081,1.02e-10,203;UBERON:0000926,2.10e-09,315;UBERON:0004120,2.10e-09,315;UBERON:0006603,2.10e-09,315 | |||
|phase1_expression=74.6698138801988,75.3633844096261,88.6603201763659,48.0351832095026,52.74140914242,33.148863915814,83.5889597955425,68.8574662035246,100.034095600538,34.8942189832143,16.0494268633658,66.1877357554422,72.7996859910532,80.6956621299504,56.6689512494736,59.836938034208,78.952983171141,70.8400787675752,58.5519358548608,44.3235809076436,43.8601486175144,78.9905898124781,47.2289378766244,29.564875815743,33.6454274114071,30.4125354876846,28.0784015918814,26.6042440840236,126.269932868498,72.159926842276,128.032933982395,12.871897142705,18.3735610454733,21.4457325896737,28.8952658164525,24.7374464528113,54.0224808376119,85.869288322441,74.2014455639524,74.8687503969689,98.9706396140466,97.1680998056939,108.439313973993,105.704519592744,80.1097000620276,80.2953242531672,87.8581759503488,89.2234317007362,93.2216176394262,117.378496067437,105.538211089989,110.200719128081,107.905398070562,84.5584935494812,93.4442757500958,115.016069460531,96.6087771204774,96.8558217958315,112.638872392492,100.129856447741,88.2285233602677,92.0285127520938,100.529683441302,75.4417808442869,125.950809564805,85.107783703671,99.0287375902964,104.268196081548,106.903998276141,113.155388091366,90.8099253950053,104.222570984481,98.7362648815559,83.2345828069051,66.9703544889887,82.3958476847917,87.8409895565592,86.0513595981831,89.0419750301824,49.5922174109772,56.8901696789398,62.6538047412694,54.55883578301,57.3445541825238,38.2488979161329,55.0481987110794,46.0455385091414,52.8772244758125,43.6289616038009,42.9324189540914,38.137268930333,28.774622279176,38.9918692687733,44.9382517168688,25.7833938971507,55.5740418875413,29.1130459768473,33.7989255964282,30.6346233509269,46.4778457186085,29.9848485302903,30.3006595670229,15.5861382726329,62.8354976832379,35.6473148044553,35.2238892387958,45.7658529762876,40.0925830741363,42.2692879569604,30.2565744470764,32.6093020987301,31.0089301736506,31.881611079843,32.1048993707656,19.8617495229456,39.2050325733579,36.0227263985806,37.111764112124,40.4831507231205,41.4135038621326,34.5074230543902,25.6622052001061,32.8253759589545,35.1963180674651,36.2299107001803,49.7232229292435,44.3409118337365,35.0795733211034,33.9649048645054,39.5370622600041,58.5136479153508,56.3388722151054,86.6908169299136,39.7583067623023,71.6913212209322,87.3424509333767,81.9144525462632,125.065161667777,44.9985729700963,40.1330209407241,46.9916103458224,65.0311109846143,59.0158367033918,44.864917576916,87.9523436804192,87.2389983869329,84.1623890084416,108.990215307541,120.690926174607,92.1214603297321,44.1252544354085,43.0117297553062,55.1953397556075,39.0062479927567,66.700410357375,43.4686506265307,43.2619580731198,65.8962735881789,65.4609923343547,94.7259334124017,70.8979598112099,23.5684352772739,114.70916704764,23.1627740617897,57.5200782996049,44.1140657723354,35.0265821296825,33.55822118403,39.8623257411296,23.7316414892032,43.4188133115065,130.462613261703,143.47869773488,45.3537814228236,70.5700171407352,57.2369912723901,132.938817536472,193.901555626198,58.1656146805306,54.9464048139461,32.0246987189115,78.1936128482397,71.2673271065465,41.895019013673,31.3846853977841,71.2893484207627,78.3599257292799,60.6892508449533,45.5753712172268,23.3893446833224,42.2939765961597,17.8500437938523,15.5398026593406,15.1686871238428,55.3257804100761,36.7274608762186,64.1653101101503,93.8522257252822,82.3398874497594,30.0353249439549,39.5239977998931,42.5890368303787,32.0303410872228,39.343104398754,46.9706054342497,59.4586323850098,81.1285518095623,46.8474916450887,76.4199848034552,114.253203017934,80.5341224406335,108.933067878638,46.1675330988206,72.6546322928674,74.4467425326359,205.063243673138,46.9646364876977,58.8170693988787,69.8658730695052,63.5269003297931,126.383414935915,43.12189804143,51.0377382854568,35.3667361288833,49.6397939475319,36.7109882097925,20.0036878052536,18.024048491722,26.3760250313807,26.6408911389502,30.2785021050754,10.5843434131991,48.4993550222429,88.1240085324253,17.9575397758225,83.5862270457562,95.2880915803853,28.3936320095625,26.8049657224182,29.4033456457848,28.8970208558872,27.0170510674584,25.8624974831095,29.7977191033963,32.3765417456821,27.3170481431937,38.3840836404817,67.316051425654,88.488412436251,80.8547912620481,126.755034821831,73.712041250822,119.930351056325,16.7755977777567,60.633300201755,69.9996666017984,31.1690810560497,37.0925785750145,22.8200767374402,41.2944465407042,60.2745364824101,42.6373261964627,31.7528952455601,84.0495436069307,114.238659491454,74.7818199402362,62.5030441978424,55.9347207569719,62.4261474387827,58.3770590224513,101.687623514095,110.918021675999,95.2725750270748,37.4935335947108,62.4893516899757,39.8388023251106,28.2109346513972,26.7383223432845,28.7537009373908,45.8176811243227,64.6275505657079,74.6381215946779,58.9450609475372,61.9850348123526,60.0690080003919,38.580830981386,35.1652341630141,30.7930402840869,38.2518272856363,39.3449405775532,56.0219807955933,28.0327710863402,39.2364061949952,25.3017086082278,71.487258814051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| |||
|short_description=p1@OS9 | |||
}} |
Revision as of 14:14, 11 January 2014
Short description: | p1@OS9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OS9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000257966, ENST00000315970, ENST00000389142, ENST00000389146, ENST00000413095, ENST00000435406, ENST00000439210, ENST00000547079, ENST00000550372, ENST00000550793, ENST00000550848, ENST00000551035, ENST00000551285, ENST00000552423, ENST00000552787, ENST00000553208_5end |
EntrezGene: | OS9 |
HGNC: | 16994 |
UniProt: | G3XA88Q13438E9PEY5A6NLB2B4E321E7ENT8E7EW91F8W1V2F8VZI7F8VWQ2F8VUH2F8W0R2F8W1N0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.80e-26 | 72 |
macrophage dendritic cell progenitor | 2.59e-22 | 61 |
monopoietic cell | 8.59e-22 | 59 |
monocyte | 8.59e-22 | 59 |
monoblast | 8.59e-22 | 59 |
promonocyte | 8.59e-22 | 59 |
granulocyte monocyte progenitor cell | 1.23e-21 | 67 |
defensive cell | 5.82e-21 | 48 |
phagocyte | 5.82e-21 | 48 |
myeloid lineage restricted progenitor cell | 2.35e-20 | 66 |
classical monocyte | 4.33e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.33e-18 | 42 |
connective tissue cell | 1.43e-12 | 361 |
mesenchymal cell | 1.35e-11 | 354 |
multi fate stem cell | 4.36e-09 | 427 |
myeloid cell | 1.36e-08 | 108 |
common myeloid progenitor | 1.36e-08 | 108 |
somatic stem cell | 3.09e-08 | 433 |
motile cell | 5.94e-08 | 386 |
stem cell | 5.65e-07 | 441 |
leukocyte | 6.47e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.56e-20 | 76 |
bone element | 1.32e-19 | 82 |
skeletal element | 3.40e-19 | 90 |
immune system | 8.55e-19 | 93 |
skeletal system | 2.61e-18 | 100 |
hemolymphoid system | 5.52e-15 | 108 |
hematopoietic system | 2.05e-14 | 98 |
blood island | 2.05e-14 | 98 |
connective tissue | 2.82e-12 | 371 |
musculoskeletal system | 1.89e-11 | 167 |
lateral plate mesoderm | 1.02e-10 | 203 |
mesoderm | 2.10e-09 | 315 |
mesoderm-derived structure | 2.10e-09 | 315 |
presumptive mesoderm | 2.10e-09 | 315 |