FFCP PHASE1:Hg19::chr12:70133441..70133479,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117177 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16508 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=253bp_to_ENST00000552199_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_RAB3IP_5end | |||
|id=chr12:70133441..70133479,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.04e-14!42;CL:0000860!8.97e-13!45;CL:0000557!1.98e-11!71;CL:0002009!6.93e-10!65;CL:0000738!1.40e-09!140;CL:0000080!1.74e-09!6;CL:0000839!1.97e-09!70;CL:0000766!3.78e-09!76;CL:0002031!4.90e-09!124;CL:0002194!3.40e-08!63;CL:0000576!3.40e-08!63;CL:0000040!3.40e-08!63;CL:0000559!3.40e-08!63;CL:0002087!4.55e-08!119;CL:0002251!2.43e-07!21;CL:0002076!2.87e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.40e-20;33!CL:0002057;2.40e-20;33!CL:0001014;3.17e-20;2!CL:0001016;3.17e-20;2!CL:0000473;9.92e-16;39!CL:0000234;9.92e-16;39!CL:0000576;5.19e-15;48!CL:0002393;5.97e-15;6!CL:0002397;5.97e-15;6!CL:0000766;4.40e-14;69!CL:0000453;1.20e-08;5!CL:0002087;5.24e-08;104!CL:0000840;2.41e-07;5!CL:0000763;6.56e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.58e-31,42;CL:0002057,4.58e-31,42;CL:0002009,3.86e-28,61;CL:0000473,5.87e-27,48;CL:0000234,5.87e-27,48;CL:0000557,1.82e-25,67;CL:0002194,3.36e-21,59;CL:0000576,3.36e-21,59;CL:0000040,3.36e-21,59;CL:0000559,3.36e-21,59;CL:0001014,3.33e-20,2;CL:0001016,3.33e-20,2;CL:0000766,3.97e-20,72;CL:0000839,8.61e-19,66;CL:0000763,2.08e-17,108;CL:0000049,2.08e-17,108;CL:0002031,1.99e-15,120;CL:0000738,2.41e-15,136;CL:0002032,1.40e-12,161;CL:0000837,1.40e-12,161;CL:0000037,5.96e-12,168;CL:0002087,6.97e-12,115;CL:0000988,3.25e-11,177;CL:0002393,3.69e-10,9;CL:0002397,3.69e-10,9;CL:0000453,1.22e-08,5;CL:0000840,2.45e-07,5;CL:0001029,2.45e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.85e-21;42 | |||
|ontology_enrichment_disease=DOID:305!5.46e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.99e-11!102;UBERON:0003061!5.99e-11!102;UBERON:0002193!6.45e-10!112;UBERON:0002371!2.40e-09!80;UBERON:0001474!3.23e-08!86;UBERON:0000344!2.13e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.33e-10;1!UBERON:0003703;1.33e-10;1!UBERON:0001174;1.33e-10;1!UBERON:0004914;1.33e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.11e-22,76;UBERON:0001474,1.82e-20,82;UBERON:0004765,1.80e-18,90;UBERON:0002405,8.22e-18,93;UBERON:0002390,8.47e-17,98;UBERON:0003061,8.47e-17,98;UBERON:0001434,2.02e-16,100;UBERON:0002193,4.74e-15,108;UBERON:0004913,1.21e-10,1;UBERON:0003703,1.21e-10,1;UBERON:0001174,1.21e-10,1;UBERON:0004914,1.21e-10,1;UBERON:0002204,5.85e-09,167;UBERON:0003081,5.75e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,0.656804715599566,0.472264687882075,1.18009283054671,0,0,0,0,0,0,0,0,4.9859586767869,3.00816671205213,3.90619567288533,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0.512321413058201,0.709446689665756,20.3399951634605,18.0735711403471,5.41705946377367,0,0,0,15.9163624032869,28.8836124368484,15.983428144976,0,0,0,1.16083695451434,4.53908179752912,0.622822248995575,0,0,0,0.605399502633369,1.84138817993782,0.632924774881769,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26465616318295,0.141353071433941,0,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0.569219092059585,0,0,0.195984794828755,0.783532859223623,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0.0801588202515337,0,0,0.288180834308212,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,2.32991899054908,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0,0,2.0247650239635,17.7974449548328,0.0607495566580247,0,1.10327990218877,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0.121792598380896,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0.0981477185010256,0.11796972334774,0,0.346576998451015,0,0,0,0,0,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0.40781839786099,0,0.118193840883968,0.111231401892069,0,0,0.280272163313789,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,0,1.8328549483524,0,0,0.335566295393377,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0.754814217833368,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@RAB3IP | |||
}} |
Revision as of 14:37, 11 January 2014
Short description: | p6@RAB3IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RAB3IP_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 253bp_to_ENST00000552199_5end |
EntrezGene: | RAB3IP |
HGNC: | 16508 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.11e-22 | 76 |
bone element | 1.82e-20 | 82 |
skeletal element | 1.80e-18 | 90 |
immune system | 8.22e-18 | 93 |
hematopoietic system | 8.47e-17 | 98 |
blood island | 8.47e-17 | 98 |
skeletal system | 2.02e-16 | 100 |
hemolymphoid system | 4.74e-15 | 108 |
hepatopancreatic ampulla | 1.21e-10 | 1 |
extrahepatic bile duct | 1.21e-10 | 1 |
common bile duct | 1.21e-10 | 1 |
duodenal papilla | 1.21e-10 | 1 |
musculoskeletal system | 5.85e-09 | 167 |
lateral plate mesoderm | 5.75e-07 | 203 |