FFCP PHASE1:Hg19::chr12:105724535..105724548,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387882 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35164 | |||
|TSSclassifier=strong | |||
|UniProt=F8VXK5 | |||
|association_with_transcript=47bp_to_ENST00000549893_5end | |||
|coexpression_cluster_id=C3224 | |||
|description=CAGE_peak_3_at_C12orf75_5end | |||
|id=chr12:105724535..105724548,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.43e-15!180;CL:0000144!2.76e-14!625;CL:0000057!1.08e-13!75;CL:0000003!1.41e-13!722;CL:0002371!1.06e-12!591;CL:0002620!3.58e-11!23;CL:0000012!2.49e-10!682;CL:0000548!6.57e-10!679;CL:0000004!6.57e-10!679;CL:0000255!6.57e-10!679;CL:0000192!1.50e-09!42;CL:0000514!1.50e-09!42;CL:0000048!1.58e-09!430;CL:0000723!2.67e-09!436;CL:0000359!4.62e-09!32;CL:0000034!8.69e-09!444;CL:0000183!7.24e-08!59;CL:0000542!8.35e-08!53;CL:0000051!8.35e-08!53;CL:0000838!1.00e-07!52;CL:0000680!1.41e-07!57;CL:0000056!1.41e-07!57;CL:0000355!1.41e-07!57;CL:0000187!3.90e-07!54;CL:1000497!4.01e-07!18;CL:0002518!4.01e-07!18;CL:1000449!5.14e-07!16;CL:0000084!6.37e-07!25;CL:0000827!6.37e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.02e-11;23!CL:0000359;1.84e-09;32!CL:1000497;5.19e-09;17!CL:0002518;5.19e-09;17!CL:1000449;5.91e-09;15!CL:1000507;1.72e-08;10!CL:1000494;1.72e-08;10!CL:0000084;3.11e-07;25!CL:0002681;6.52e-07;12!CL:0002584;6.52e-07;12!CL:0000192;7.85e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.13e-14,76;CL:0000048,1.11e-12,427;CL:0000723,3.85e-12,433;CL:0002620,1.16e-11,23;CL:0000034,1.86e-11,441;CL:0000359,9.28e-10,32;CL:0000192,3.30e-09,43;CL:0000514,3.30e-09,43;CL:1000497,6.79e-09,17;CL:0002518,6.79e-09,17;CL:1000449,7.17e-09,15;CL:1000507,1.83e-08,10;CL:1000494,1.83e-08,10;CL:0000134,2.72e-08,354;CL:0002320,4.09e-08,361;CL:0000542,2.34e-07,53;CL:0000051,2.34e-07,53;CL:0000838,2.86e-07,52;CL:0000680,3.55e-07,58;CL:0000056,3.55e-07,58;CL:0000355,3.55e-07,58;CL:0000084,4.11e-07,25;CL:0000827,4.11e-07,25;CL:0002681,7.81e-07,12;CL:0002584,7.81e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;7.85e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.81e-12!83;UBERON:0002329!4.81e-12!83;UBERON:0003077!4.81e-12!83;UBERON:0003059!4.81e-12!83;UBERON:0007282!4.81e-12!83;UBERON:0009618!4.81e-12!83;UBERON:0007285!4.81e-12!83;UBERON:0004290!1.24e-09!70;UBERON:0005256!7.71e-09!143;UBERON:0000486!1.16e-08!82;UBERON:0002097!3.54e-08!40;UBERON:0002199!6.30e-08!45;UBERON:0002416!6.30e-08!45;UBERON:0004211!5.14e-07!16;UBERON:0001285!5.14e-07!16;UBERON:0007684!5.14e-07!16;UBERON:0003220!5.14e-07!16;UBERON:0004208!5.14e-07!16;UBERON:0001134!6.14e-07!61;UBERON:0002036!6.14e-07!61;UBERON:0003082!6.14e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.91e-09;15!UBERON:0004819;5.91e-09;15!UBERON:0001285;5.91e-09;15!UBERON:0007684;5.91e-09;15!UBERON:0004211;1.72e-08;10!UBERON:0009773;1.72e-08;10!UBERON:0001231;1.72e-08;10!UBERON:0004810;1.72e-08;10!UBERON:0001225;6.52e-07;12!UBERON:0008987;6.52e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.04e-11,78;UBERON:0007524,3.77e-09,73;UBERON:0002329,3.82e-09,71;UBERON:0003059,3.82e-09,71;UBERON:0007282,3.82e-09,71;UBERON:0004290,3.82e-09,71;UBERON:0009618,3.82e-09,71;UBERON:0004211,7.17e-09,15;UBERON:0009773,7.17e-09,15;UBERON:0001231,7.17e-09,15;UBERON:0001285,7.17e-09,15;UBERON:0007684,7.17e-09,15;UBERON:0004208,7.17e-09,15;UBERON:0003077,9.74e-09,72;UBERON:0007285,9.74e-09,72;UBERON:0004810,1.83e-08,10;UBERON:0002384,2.07e-08,371;UBERON:0000486,4.93e-08,83;UBERON:0002097,5.40e-08,41;UBERON:0006555,8.01e-08,16;UBERON:0004819,8.01e-08,16;UBERON:0002199,1.40e-07,46;UBERON:0002416,1.40e-07,46;UBERON:0001225,7.81e-07,12;UBERON:0008987,7.81e-07,12 | |||
|phase1_expression=3.99692434395225,2.78330681058278,1.55049844505568,9.00659685178174,2.23480547213644,4.36169262050184,2.53299878168311,0.631719873426831,0.261185628199839,2.94880723801811,6.28021051175185,8.51921351307672,3.4289707169699,0.37129905888014,1.65698687863958,30.2546315903299,21.6970030088632,29.9427137058823,22.4449087443633,3.81675280038043,9.58803248847989,0.626909442956176,0.572471974262113,4.24310717725941,3.26410862946487,6.72437970581971,7.22485187159523,6.13944094246698,5.50709987588466,15.3531759238885,2.32224184974114,0,0,0,0.852139206383318,1.42169232487422,3.52320527201817,0.553995408531877,1.40381113229099,2.82114131930607,0,0.647787332037959,0.77272670290256,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,1.35426486594342,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,1.13477044938228,0.622822248995575,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,0.889509253863555,0.853460445133014,3.2031678962881,1.72425731986345,1.32208974556972,1.90810750907073,0,2.34894875748376,1.52909291250092,3.96513985737078,5.04457706683382,1.05353633910031,2.360517241366,1.17903228824749,4.72883447698871,7.35620579718984,1.30368906653436,1.4203434172042,3.89653456815823,13.1464339124505,8.83817722424511,9.30442357251209,7.04090045789041,11.6563100950364,14.1764688840267,11.18177751305,11.0540007114339,7.82468331484642,1.03800594213442,0.535081656179426,3.1360657141493,14.2769771798933,5.74830740402882,4.81078423675682,3.79529538029254,6.37130828648194,14.9749194386976,19.9594929334159,6.32415500126646,8.31912972503719,6.24653632761729,6.39298580518846,8.21127996921047,8.0642697289893,16.0464117470104,7.38604459802275,0,0,0.383587685530591,3.2529523714611,4.51204119572301,1.73815822752988,0.795285947051099,0.973269740605272,1.89069634328136,7.76052891118974,2.81071314218003,1.17881167947941,0.728590576585084,0.370784442784429,0,0,0.132957960518865,62.2460529436943,82.9392620631185,84.3208528018112,0.39752481473341,0,0,0,0.838998872419812,1.92582629358047,1.67195973229448,0.258416759169329,0.71153252537342,0.33472061276467,0,0.760272105718513,0.976248230192678,1.10298924103761,1.62028389576352,0.535798369704479,0.44905874525234,0.563057402416611,0,1.89853131913626,0.916008719652036,3.9534125230819,7.75560528296651,0.436094052142534,5.4666914686485,14.8157698647558,2.64818361626438,0.573673241497627,3.90135220418193,2.80338800071154,2.1349799145941,3.94668077467456,0.311211035399766,1.0776853765575,2.7788523529288,0.605429710579726,1.72852777344,7.26396438684769,4.37024107562449,4.56377457235559,9.56471555531527,9.51219439014496,46.1337891449175,37.9217178096071,2.85815839756851,4.42203542322365,1.44656093646072,7.12801714369232,4.45080472701402,2.73048408581408,6.46756327634615,8.75347792561144,15.1393409045077,9.14311581097804,14.4862614890677,14.4049264025539,2.70428506031874,2.04177929688038,15.7862879406199,14.308345050844,10.5965950579781,15.6047369963889,24.6295544879869,6.1833729610951,30.1509307257176,14.1772119082664,41.703038208993,13.126556260694,30.5605663492434,7.11242650002772,33.3709016965617,121.507030462534,41.8814663006904,3.09217365061275,6.81865301477087,2.86804595389004,0.121973706129595,0,0.232387885739037,0.414644220061482,0.756962552626885,0,7.8224766164908,9.00537313470039,6.90674606762403,2.78620756819187,7.21879481669586,0.473227200159376,0,0.241011029883482,0.220587945464788,0.217879444092406,0.71181185733329,0,0.392442930250692,0.38474715694639,0,9.81692416624121,0.8231480226628,0,0,0,0,5.73902029239046,1.35287282397425,4.80389868835872,3.18275827685014,1.1240175325762,1.10581869652794,0.370353780634118,7.16778271682714,4.15973914111831,5.77325368101093,1.85488647960123,2.23076519048061,0.577465791044295,0,0.570762456703795,0,0,0,0,0,11.2480600784132,5.71139235876122,5.38745369521069,1.16426079513703,0.290633938513962,3.06706143332169,0.985326475791887,0.616339038092582,0.414656231081544,0.144119953416961,0.12624243342638,0.190493682876507,0.763976851116555,0,0,0.616964956219941,0.300343057843917,0.285826432630578,5.94294747030412,3.05172048183296,5.1336800074665,4.78305348303778,7.15312891703765,3.381211010224,14.8925345287527,22.8816361205005,3.34369586540785,12.766421882095,3.72991050622539,0.285955987316295,0.542621605391443,2.46972101034231,3.58309802723109,0.710783897485092,2.37585561880029,1.50719688529793,8.71533458600294,1.29964888536674,0,0,0,27.7964832370236,19.5265290917994,4.27910715122155,7.38384664004654,1.64381058040307,5.55088986043676,11.5447698313333,11.0337225713079,13.3689096412901,10.9091580837786,1.01637849688985,0,2.31986643833309,0.167516265334349,2.55175500661265,0.749007023947182,0,0.828831026872071,1.10422342547226,2.00068208423871,1.08506009479894,15.8057854763413,24.4447714652112,9.77754973210395,3.39710103478868,1.50473049863859,4.5481500811197,2.0694614258501,5.97803038681893,3.87175253937577,13.4669602425528,0.587403472388222,5.14715135716284,4.13536052245775,2.37285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| |||
|short_description=p3@C12orf75 | |||
}} |
Revision as of 15:38, 11 January 2014
Short description: | p3@C12orf75 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C12orf75_5end |
Coexpression cluster: | C3224_Fibroblast_Dendritic_basal_chronic_leiomyoma_Renal_Aortic |
Association with transcript: | 47bp_to_ENST00000549893_5end |
EntrezGene: | C12orf75 |
HGNC: | 35164 |
UniProt: | F8VXK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.13e-14 | 76 |
multi fate stem cell | 1.11e-12 | 427 |
somatic stem cell | 3.85e-12 | 433 |
skin fibroblast | 1.16e-11 | 23 |
stem cell | 1.86e-11 | 441 |
vascular associated smooth muscle cell | 9.28e-10 | 32 |
smooth muscle cell | 3.30e-09 | 43 |
smooth muscle myoblast | 3.30e-09 | 43 |
kidney cell | 6.79e-09 | 17 |
kidney epithelial cell | 6.79e-09 | 17 |
epithelial cell of nephron | 7.17e-09 | 15 |
kidney tubule cell | 1.83e-08 | 10 |
nephron tubule epithelial cell | 1.83e-08 | 10 |
mesenchymal cell | 2.72e-08 | 354 |
connective tissue cell | 4.09e-08 | 361 |
lymphocyte | 2.34e-07 | 53 |
common lymphoid progenitor | 2.34e-07 | 53 |
lymphoid lineage restricted progenitor cell | 2.86e-07 | 52 |
muscle precursor cell | 3.55e-07 | 58 |
myoblast | 3.55e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.55e-07 | 58 |
T cell | 4.11e-07 | 25 |
pro-T cell | 4.11e-07 | 25 |
kidney cortical cell | 7.81e-07 | 12 |
renal cortical epithelial cell | 7.81e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 6.04e-11 | 78 |
dense mesenchyme tissue | 3.77e-09 | 73 |
somite | 3.82e-09 | 71 |
presomitic mesoderm | 3.82e-09 | 71 |
presumptive segmental plate | 3.82e-09 | 71 |
dermomyotome | 3.82e-09 | 71 |
trunk paraxial mesoderm | 3.82e-09 | 71 |
nephron epithelium | 7.17e-09 | 15 |
renal tubule | 7.17e-09 | 15 |
nephron tubule | 7.17e-09 | 15 |
nephron | 7.17e-09 | 15 |
uriniferous tubule | 7.17e-09 | 15 |
nephrogenic mesenchyme | 7.17e-09 | 15 |
paraxial mesoderm | 9.74e-09 | 72 |
presumptive paraxial mesoderm | 9.74e-09 | 72 |
nephron tubule epithelium | 1.83e-08 | 10 |
connective tissue | 2.07e-08 | 371 |
multilaminar epithelium | 4.93e-08 | 83 |
skin of body | 5.40e-08 | 41 |
excretory tube | 8.01e-08 | 16 |
kidney epithelium | 8.01e-08 | 16 |
integument | 1.40e-07 | 46 |
integumental system | 1.40e-07 | 46 |
cortex of kidney | 7.81e-07 | 12 |
renal parenchyma | 7.81e-07 | 12 |