FFCP PHASE1:Hg19::chr12:111887748..111887752,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=10019 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29605 | |||
|TSSclassifier=strong | |||
|UniProt=Q96BA5 | |||
|association_with_transcript=64bp_to_BC015786_5end | |||
|description=CAGE_peak_4_at_SH2B3_5end | |||
|id=chr12:111887748..111887752,+ | |||
|ontology_enrichment_celltype=CL:0000763!2.94e-17!112;CL:0000049!2.94e-17!112;CL:0000839!4.36e-17!70;CL:0002057!1.21e-16!42;CL:0000557!2.35e-16!71;CL:0000766!2.37e-16!76;CL:0002194!2.29e-15!63;CL:0000576!2.29e-15!63;CL:0000040!2.29e-15!63;CL:0000559!2.29e-15!63;CL:0000048!3.17e-15!430;CL:0002009!3.49e-15!65;CL:0000988!2.12e-14!182;CL:0000723!2.53e-14!436;CL:0000860!3.86e-14!45;CL:0000034!1.43e-13!444;CL:0000037!4.60e-13!172;CL:0000566!4.60e-13!172;CL:0002371!5.74e-13!591;CL:0002032!1.96e-12!165;CL:0000837!1.96e-12!165;CL:0002320!2.14e-12!365;CL:0000134!1.23e-11!358;CL:0000738!2.25e-11!140;CL:0000144!2.54e-10!625;CL:0002031!3.51e-10!124;CL:0000219!4.07e-10!390;CL:0002087!1.62e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.13e-19;33!CL:0002057;9.13e-19;33!CL:0000473;2.02e-15;39!CL:0000234;2.02e-15;39!CL:0000576;1.30e-14;48!CL:0000766;4.49e-10;69!CL:0002393;3.89e-09;6!CL:0002397;3.89e-09;6!CL:0000784;3.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.09e-27,42;CL:0002057,2.09e-27,42;CL:0000473,2.20e-27,48;CL:0000234,2.20e-27,48;CL:0000557,5.62e-25,67;CL:0002009,1.66e-24,61;CL:0000766,3.09e-24,72;CL:0002194,5.96e-24,59;CL:0000576,5.96e-24,59;CL:0000040,5.96e-24,59;CL:0000559,5.96e-24,59;CL:0000839,6.78e-24,66;CL:0000763,3.59e-17,108;CL:0000049,3.59e-17,108;CL:0000738,6.43e-15,136;CL:0002031,3.50e-13,120;CL:0000037,2.79e-12,168;CL:0002087,2.97e-12,115;CL:0000988,7.29e-12,177;CL:0002032,7.45e-11,161;CL:0000837,7.45e-11,161;CL:0000048,2.20e-10,427;CL:0002320,3.17e-10,361;CL:0000134,3.60e-10,354;CL:0000723,5.65e-10,433;CL:0000034,1.90e-09,441;CL:0000219,8.04e-09,386;CL:0002393,2.69e-08,9;CL:0002397,2.69e-08,9;CL:0000784,3.23e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.47e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.04e-15!80;UBERON:0002193!4.29e-14!112;UBERON:0001474!1.22e-13!86;UBERON:0002390!5.68e-13!102;UBERON:0003061!5.68e-13!102;UBERON:0002384!5.87e-13!375;UBERON:0002405!6.52e-13!115;UBERON:0002204!7.38e-12!167;UBERON:0004765!1.86e-11!101;UBERON:0001434!1.86e-11!101;UBERON:0003081!8.22e-11!216;UBERON:0000926!3.59e-07!448;UBERON:0004120!3.59e-07!448;UBERON:0006603!3.59e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.92e-22,76;UBERON:0002405,1.14e-21,93;UBERON:0001474,1.65e-21,82;UBERON:0004765,4.68e-20,90;UBERON:0002193,1.43e-19,108;UBERON:0001434,2.81e-18,100;UBERON:0002390,1.91e-17,98;UBERON:0003061,1.91e-17,98;UBERON:0003081,1.85e-12,203;UBERON:0002204,2.54e-12,167;UBERON:0002384,1.41e-10,371;UBERON:0000926,2.99e-10,315;UBERON:0004120,2.99e-10,315;UBERON:0006603,2.99e-10,315 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0,0,0.491467873003018,0,0,0,0.37129905888014,0.662794751455832,0.672325146451775,0,0,0.975865597581014,0,1.02000345622126,0.313454721478088,0,0.136874425072884,0.251085279189606,0.0764134057479513,0.164201178899891,0.236132343941038,0.786728553697808,1.15148819429164,1.54816123316076,0.919421224478927,0.30120591877825,0.739508020333575,0.309868802321207,0.142169232487422,0,6.09394949385065,5.81578897663411,7.59538047505481,0.671746422719773,0.32389366601898,0.257575567634187,1.30858414901608,0,1.21292030593908,1.85943229524548,0.822335776043652,1.23882548358041,2.58923153089935,1.5369642391746,1.18241114944293,1.03423704220986,1.29096936716765,0,1.88242339542605,1.09162460023138,1.12361742222542,1.53041946185451,0.641858054152187,3.83602275479425,0.659702600373432,0.797854630486527,0,3.19230162491442,1.70215567407342,1.86846674698672,2.00998932205395,1.0429658368404,0.65156653411535,1.81619850790011,1.10483290796269,0.316462387440884,0.422510572623884,1.27562579979026,1.25795187305026,0.673971786878971,0.901061357049038,0.32145117339416,2.28010194992999,0.99458338599545,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,1.1384259382189,1.17447437874188,1.14681968437569,0,0,0.263384084775077,0.590129310341499,0.786021525498329,0.411202997999018,0,0,0.946895611469467,0,0.111410456885174,0.294605907474837,0,0,0.384273959177026,0,0.328875809207352,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.150575119077773,0.383959833463255,0,0.473554504088034,0.821127996921047,0.80642697289893,0.267440195783507,0.434473211648397,0,0.670700859703636,0,0.722878304769133,0,0.579386075843295,0,0,0.283604451492204,0,0.351339142772504,0.196468613246569,0,0,0.97364218096405,0,0.797747763113191,3.33886874027479,2.28797964312051,1.48583000531826,0.596287222100115,1.72046919021225,0.694281003215189,1.13061588384802,0.419499436209906,0.825354125820202,0.208994966536811,2.58416759169329,0.35576626268671,0,0,0,0.976248230192678,0.367663080345869,2.43042584364528,0.357198913136319,2.69435247151404,0.788280363383256,0,0.949265659568129,0.549605231791222,0,0,0,1.49091585508596,0.25326102332916,0,0,0,0,0,0,0.311211035399766,0.942974704487816,0.980771418680752,0.302714855289863,0,0,0.624320153660641,1.71141546463335,1.19558944441441,0.587172493218824,0.161872944368132,1.12360645361799,1.63323337003915,0.491337269247072,0.413303124703062,0,0.494533858557114,0,1.43723628363248,0.505008341862199,0.250237039743928,0,0,1.83892677479412,0.150238058906597,0.226864366320042,0,0,0.635795703478686,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0.292311015483596,0,0.276149695926898,0.161646056818812,0,0.302256294682921,0,0,0,0,0.243947412259191,0.132529768321485,0,0.10366105501537,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0.441175890929576,0,0,0,0,0,2.21446636387394,0,0.4115740113314,0,1.26755034821831,0,0,0,0,0.343135620597051,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0,0.433099343283221,1.38895653772983,0.951270761172991,0,0,1.72351904261178,0.468008530278475,0.891786973732369,0,0,0,0.0895585227028483,0.290633938513962,0,3.94130590316755,0.968532774145487,0.207328115540772,1.29707958075265,0.88369703398466,0.317489471460845,0,0,0,0.719792448923265,2.10240140490742,0.285826432630578,0.784917590417525,0,0.7333828582095,0.129271715757778,0,4.22651376278,0.26593811658487,0,0.514414748524284,0,0.799266537048298,0,0.542621605391443,0,1.95441710576241,0,0,0,0,0.099972991182057,0,0.502257091432126,6.32501818449095,0.239624855491583,0,0,0.868687840005475,1.2328579353023,0.179060963239896,0.112085143993527,0.591092280605782,0.431255149719035,1.15508732651774,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,1.62759014219841,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.60818530127658,0.587403472388222,0.343143423810856,0.206768026122887,1.50999940573032,0.320182673410333,0,0,0,0.248107807818777,0.153461973288062,1.12264037773229,0.256278298511402,0,0,0,3.23840356985577,1.77561725313127,0.98552587216571,0,4.06736324609857,0,0.200506470303285,0,0.34444334449382,0.728364672026868,0.262248829918848,0,0.0770153371044148,0,2.92278449306521,0.105551628892876,3.4120015221269,2.04112446331819,0.863663664408557,0,0.541892875087706,2.00675909541941,0,0,0.447749509444357,0.219259876645935,0.261435451024901,0,0,0,0.309123034943167,0.183138929636687,0,0.574265537996172,0.650060246036521,0,0.386682873168488,1.23238893691716,0.460511024178389,1.51620229732984,0.322260734604821,0.290033387828457,0.596586391912706,0.267096106940212,0,0,0.127612712494584,0.2023155617111,0.464845549297286,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.55597265731176,0.286249773483982,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0,0,0.235624804691373,0.202182481573316,0,0.421258456238981,0.48763373908959,1.21856744815642,1.05650146756755,1.09199929126389,0.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| |||
|short_description=p4@SH2B3 | |||
}} |
Revision as of 15:56, 11 January 2014
Short description: | p4@SH2B3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SH2B3_5end |
Coexpression cluster: | NA |
Association with transcript: | 64bp_to_BC015786_5end |
EntrezGene: | SH2B3 |
HGNC: | 29605 |
UniProt: | Q96BA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.92e-22 | 76 |
immune system | 1.14e-21 | 93 |
bone element | 1.65e-21 | 82 |
skeletal element | 4.68e-20 | 90 |
hemolymphoid system | 1.43e-19 | 108 |
skeletal system | 2.81e-18 | 100 |
hematopoietic system | 1.91e-17 | 98 |
blood island | 1.91e-17 | 98 |
lateral plate mesoderm | 1.85e-12 | 203 |
musculoskeletal system | 2.54e-12 | 167 |
connective tissue | 1.41e-10 | 371 |
mesoderm | 2.99e-10 | 315 |
mesoderm-derived structure | 2.99e-10 | 315 |
presumptive mesoderm | 2.99e-10 | 315 |