FFCP PHASE1:Hg19::chr12:122238579..122238612,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1010 | |||
|description=CAGE_peak_at_chr12:122238579..122238612,+ | |||
|id=chr12:122238579..122238612,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.33e-43!140;CL:0002031!2.48e-35!124;CL:0002087!7.27e-34!119;CL:0000766!1.33e-30!76;CL:0000037!1.79e-30!172;CL:0000566!1.79e-30!172;CL:0000988!2.40e-30!182;CL:0002032!3.46e-28!165;CL:0000837!3.46e-28!165;CL:0000557!9.20e-28!71;CL:0002057!1.23e-27!42;CL:0000860!1.87e-27!45;CL:0000839!3.57e-25!70;CL:0002009!4.45e-25!65;CL:0002194!5.45e-24!63;CL:0000576!5.45e-24!63;CL:0000040!5.45e-24!63;CL:0000559!5.45e-24!63;CL:0000763!3.34e-18!112;CL:0000049!3.34e-18!112;CL:0000838!1.23e-09!52;CL:0000542!1.95e-09!53;CL:0000051!1.95e-09!53;CL:0000134!1.52e-08!358;CL:0002320!9.58e-08!365;CL:0000791!1.17e-07!18;CL:0000789!1.17e-07!18;CL:0002420!1.17e-07!18;CL:0002419!1.17e-07!18;CL:0000790!1.17e-07!18;CL:0000219!2.27e-07!390;CL:0002393!5.59e-07!9;CL:0002397!5.59e-07!9;CL:0000236!7.55e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.65e-41;33!CL:0002057;5.65e-41;33!CL:0000576;1.29e-33;48!CL:0000473;1.95e-27;39!CL:0000234;1.95e-27;39!CL:0000766;5.88e-25;69!CL:0002087;9.63e-17;104!CL:0000738;1.35e-14;136!CL:0000236;1.03e-12;13!CL:0000791;5.10e-11;18!CL:0000789;5.10e-11;18!CL:0002419;5.10e-11;18!CL:0000094;1.22e-10;8!CL:0000763;1.22e-10;100!CL:0000625;1.67e-10;11!CL:0002393;4.38e-09;6!CL:0002397;4.38e-09;6!CL:0000988;7.40e-09;177!CL:0000219;1.22e-08;193!CL:0000542;6.56e-08;53!CL:0000081;3.06e-07;11!CL:0000084;6.14e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.42e-68,136;CL:0000860,6.09e-57,42;CL:0002057,6.09e-57,42;CL:0000766,4.76e-53,72;CL:0000037,1.98e-52,168;CL:0002031,1.98e-52,120;CL:0002087,1.37e-50,115;CL:0000988,2.12e-49,177;CL:0000473,8.53e-48,48;CL:0000234,8.53e-48,48;CL:0000557,3.34e-47,67;CL:0002032,3.47e-47,161;CL:0000837,3.47e-47,161;CL:0002009,4.92e-43,61;CL:0000839,6.50e-42,66;CL:0002194,8.62e-41,59;CL:0000576,8.62e-41,59;CL:0000040,8.62e-41,59;CL:0000559,8.62e-41,59;CL:0000763,1.07e-35,108;CL:0000049,1.07e-35,108;CL:0000134,8.41e-17,354;CL:0002320,6.42e-16,361;CL:0000219,4.99e-14,386;CL:0002393,5.01e-13,9;CL:0002397,5.01e-13,9;CL:0000236,1.27e-11,14;CL:0000838,9.65e-11,52;CL:0000791,1.10e-10,18;CL:0000789,1.10e-10,18;CL:0002420,1.10e-10,18;CL:0002419,1.10e-10,18;CL:0000790,1.10e-10,18;CL:0000094,1.20e-10,8;CL:0000542,2.12e-10,53;CL:0000051,2.12e-10,53;CL:0000034,2.53e-10,441;CL:0000048,3.40e-10,427;CL:0000625,3.91e-10,11;CL:0000723,1.10e-09,433;CL:0000081,3.01e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;6.87e-41;42!CL:0000790;5.10e-11;18!CL:0000049;4.82e-10;108!CL:0000051;6.56e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.77e-26!102;UBERON:0003061!1.77e-26!102;UBERON:0002371!3.95e-24!80;UBERON:0002193!1.89e-21!112;UBERON:0001474!2.01e-21!86;UBERON:0004765!3.46e-16!101;UBERON:0001434!3.46e-16!101;UBERON:0002405!5.16e-14!115;UBERON:0003081!1.25e-09!216;UBERON:0002384!6.30e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.73e-45,98;UBERON:0003061,5.73e-45,98;UBERON:0002371,5.77e-43,76;UBERON:0002193,8.32e-39,108;UBERON:0001474,1.82e-38,82;UBERON:0004765,2.04e-33,90;UBERON:0002405,2.99e-33,93;UBERON:0001434,2.86e-28,100;UBERON:0003081,2.90e-17,203;UBERON:0002384,3.17e-15,371;UBERON:0002204,1.13e-11,167;UBERON:0000926,9.47e-07,315;UBERON:0004120,9.47e-07,315;UBERON:0006603,9.47e-07,315 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.281908808191942,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0.410623275218653,0.125542639594803,0.61130724598361,0.246301768349837,0.472264687882075,3.54027849164014,1.15148819429164,2.63187409637329,0.919421224478927,0,0,0,0.142169232487422,2.93600439334847,3.32397245119126,3.20871115952227,4.55722828503289,1.34349284543955,0,1.80302897343931,4.36194716338694,4.53451132426571,3.15359279544161,7.20530014407622,7.81218987241469,4.33588919253145,6.32923263108731,6.91633907628572,6.3850202069918,7.58440497620561,9.03678557017357,5.41705946377367,3.76484679085209,6.5497476013883,6.96642801779762,4.59125838556354,6.09765151444578,8.95071976118658,2.30895910130701,4.3882004676759,3.83602275479425,6.96502172708602,10.2129340444405,7.4738669879469,5.7787193009051,7.30076085788282,5.86409880703815,7.87019353423379,4.41933163185078,7.59509729858123,5.0701268714866,5.52771179909113,6.28975936525128,3.59451619668784,4.05477610672067,2.73233497385036,7.41033133727246,5.37075028437543,6.02791707423292,10.5597746676794,8.7382177801941,14.2321480618169,2.56038133539904,11.6114836240444,12.0698012390441,10.5767179645578,13.3567525634951,3.41527781465669,1.17447437874188,1.91136614062614,2.64342657158052,1.12101712596307,1.58030450865046,0.786839080455332,0.393010762749165,1.02800749499755,1.00311897234407,1.30368906653436,3.78758244587787,1.94826728407911,1.22551502573691,1.76763544484902,1.55073726208535,1.89562704635511,0.512365278902701,1.43065282315866,1.97325485524411,1.10540007114339,1.15921234294021,1.18629250529648,1.60524496853828,4.18142095219907,0.906474741580529,3.06576394881537,1.71813722741315,2.78321661221453,2.22995790026868,4.55758417699493,4.75226022224187,0.903450714466637,2.17577238962511,1.24930726552346,2.8413270245282,6.56902397536837,2.21767417547206,1.06976078313403,1.01377082717959,4.87613732627923,0,0.255725123687061,0,0,0.289693037921647,0.795285947051099,0.973269740605272,0.472674085820339,0,0.263504357079378,1.30979075497713,0.364295288292542,1.11235332835329,0.649094787309367,0.522389211897802,0.930705723632056,4.76981248610684,5.14795419702115,2.60020250930695,0.39752481473341,0,0.347140501607594,0,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0.112611480483322,1.53316637465883,0.949265659568129,0.183201743930407,2.63560834872127,11.6334079244498,0,0,0.25326102332916,0.529636723252875,0,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0,0,1.1409436430889,0.149448680551801,0.117434498643765,0,0,0,0.368502951935304,0,0,0.741800787835671,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.600952235626387,0,0.538168907066586,0.213557388818567,0.423863802319124,0,0.206105058476878,0,0,0,0.194874010322397,0.252433774244115,0.460249493211497,0.323292113637624,0,0,0.169560592310488,0.193260853163297,0,0,0.365921118388786,0,0.232387885739037,0,0.504641701751257,0.36497735907583,1.56449532329816,0,1.38134921352481,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.441175890929576,0.435758888184812,0.474541238222193,1.21348177344148,0.98110732562673,1.15424147083917,0,0,0,0,2.53510069643662,0.982827216677626,0.590789906681404,0,0.491953754172454,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0.352226082707465,0,0,0.190254152234598,3.1608175918371,4.29243081047436,0.984868024349589,0,0.891786973732369,0,0,0.425325291727159,0,0,0,1.47798971368783,0.616339038092582,2.48793738648926,2.88239906833923,1.38866676769018,0.126995788584338,0.381988425558278,3.51652341630141,3.4214489204541,0.205654985406647,0.600686115687835,0.285826432630578,0,0,0,0,3.57656445851882,0,0,0,0.257207374262142,0,0.532844358032199,0,1.08524321078289,1.64648067356154,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0.985153801009636,0.862510299438069,0.641715181398742,0.254094624222463,0,0,0,0.637938751653163,5.99205619157746,2.99161459204025,5.38740167466846,0,0,0,0.415941723061614,0.178428988797162,0.630809660135739,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0.260650843404249,0,0.686286847621712,1.24060815673732,3.01999881146064,1.81436848265855,1.5156378572313,1.66435439510497,0.30239029332968,0,0.460385919864187,0,0.384417447767103,0,0.482561763430822,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0.116210378459959,0.604297247958111,0,0.184161977871793,0.114814448164607,0,0,0.451199612907412,0,0.784349769176855,0,0.527758144464379,0,0.170093705276516,0,0,0.812839312631559,1.00337954770971,0.254876273045038,0.831076008928724,0,0.438519753291869,0,0,0.328014645699706,0,0.824328093181778,0.183138929636687,0.330037999682352,0,0,0,0.290012154876366,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.681813019328807,0.178064071293475,0.165284915360978,0,0.255225424989168,0.6069466851333,0,0,0,0.308033580176089,0,0.869932992075073,0.37064843820784,0,0,0,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0.353437207037059,0,0,0.421258456238981,0.48763373908959,0,0,0,0.282810863907425,0,1.65409603063837,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0.354761064070598,0.422215270595328,0,0.379473173765715,0,0.288666338176536,0.670302275535787,2.17781969722645,1.12972560932135,0,0,0,0,1.01489521846434,0,2.27858874869665,1.90585420366231,1.23408681925858,1.29694662238543,1.08006287447623,4.75875105776562,0,0,0.490080431962063,0.185803175125719,0,0,0,0,0.191505370132367,0,0.324621940274555,0,0,0.47003968731907,0,0.169291777801603,0,0.605399121573143,0.851692475380653,0,0.307240764308458,0.671028323677248,0.500547425135725,0.19538809540204,0,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0.445773537109913,0,0.71623345421307,0.296964680832639,0.307160702099232,0,0.281338832821026,0,0.329607748453519,0,0.398495976502139,0.552567831062295,0,0,0.246169610922139,0.311039587661807,0.0898683511473268,0.179021174675609,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0.508507300585533,0.472775363535873,0,0,0.173624994933292,0,0.120596438625408,0,0.774054819518572,0.295547618953547,0.219385397153973,0.21787692703798,0.278847488557207,0.538651809526579,0,0.46112780877612,0.179515288819544,0,1.27600463892768,0.183195186803725,0,0,0,0,0,0,0.167821586975843,0.37950746544837,0,0,0.326465616318295,0.141353071433941,0.432777279484182,0,0.353830258013357,0,0.889563386041866,0.370691816839509,0.313265848516366,0.337005664903385,0,0,0.364909578431332,0.782658475728359,0,0,0,0,0.31593289814244,0.751617097072463,0.311064574191741,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0.34945333648406,0,0.387025325156341,0.511625219603299,0.492692742319255,0.193978032976839,0,0,0,0.19871461170299,0.316553979779393,0.586654148204409,0.160317640503067,0.213452994739353,0.19980960958213,0.144090417154106,0.114536596165916,0.343189995723929,0.14405479798815,0.248505071130865,0,0,0,0.101998217636322,0,0,0.273810757783986,3.83239764200917,0,0.262887354279314,0.279282401272254,0.458320848023367,2.87149209830726,0.399358000997982,0.858452096273142,0.446342914883745,0.134366944973453,0,0,0.315132729228895,0,0.404421263125109,0.0984274815147488,0.0846733320657845,0,0.544813624446302,0.160753148465019,0.137539436597234,0.415440338029185,1.349843349309,7.7380195455795,0.121499113316049,0.335434687599266,0.472834243795189,0.629455057619977,0.105600336519406,0.35857467866569,0,0.714695326373367,0.662091970365432,0.25426853765475,0,0,0,0,0.082092520749339,1.02232813071253,0.226624183040251,0.732761168390412,0,0.517131825446202,0.66116300871345,0,0,0.213574825135389,0,0.414239055347196,0,0.592834895693833,0.243585196761792,0.638341257770182,0.544017803369474,1.7548292581589,1.22538230705385,0.655745261419609,0.314108192500469,0,0.122026264901963,0.250381861413,0,0.554645257684261,0.310482014706917,0.691743174681154,0.37494122388632,0.303298235083296,0,0,0,0.28984205722165,0.447764408660622,0.233713309847224,0,0,0,0,0.686520205190771,0.604923695052956,0.15543720058278,0.295710299979268,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0.107410557042488,0,0.398095888698616,0.400027764663154,0,0.336749488765919,1.26184898228651,0,0,0.260994291965212,0.453411851024545,0.231522474323834,0.489473409012935,0.179088841081487,0.308801447160972,1.09642024789354,0,0.192914038270915,0.168942440653073,0,0.345430341731199,0,1.24432592536558,0.779441235357554,1.99297260470045,1.30852315404675,0,0.245772908753719,0,0.19998739585493,0.213383459388282,1.37771983728653,0.567515953566836,0.736423801007363,0.139879507719444,1.24415452006595,0.127894371303652,0.107824811396682,0.471797825567689,0.436838552768056,0,0.425149840203366,0,0,0,0.94634094001504,1.60114149657094,0.352675943690684,0,0.192687675289379,0,0.957803154342908,0.41023272848151,0.252071696221718,0.484100767249525,0,0,0.196295437002051,0,0.366857197043358,0.346576998451015,0.381382095467167,0,0,0.0752103283492573,0,0,0.261906694481422,0.163771917510097,0.147856086217045,0.270150338473579,0,0.206686796501184,0.253663240775627,0,0,0,0.175871244359621,0.383287282918786,1.07140367175657,2.35398605553177,0,0.455324382702595,0.354809480650555,0.460935950223117,0.342976018874837,0.0679697329768317,0.460409414939944,0.590969204419841,0,0.470958557103084,0,0.280272163313789,0,0.215927591218621,0.9555033757741,0.214429632529969,0,0.23248285073625,0,0,0.414432328326074,0,0.691259661814092,0.430227358820278,0,0,0,0.4582137370881,0.31020638566432,0,0.111855431797792,0.098150233615243,0,0.647428837187895,0,0,0.485710993059139,0.233939463462106,0.397901550322736,0,0.67767649223376,0.219881033490858,0.754814217833368,0.540219106755613,0,0,0,0.235676547101626,0.196308467114945,0.594092800654172,0,0,0.751871343838829,0.386747327841463,0,0.535661815816973,0,0.240724100067505,0,0.458729283404541,1.29005624836306,0,0.271965960763659,0,0.5290268405154,0,0,0.432626562123789,0.126166424835079,0.109265571963696,0.633492505057185,0.101988829741982,0.26721740526556,0.643264296743914,0,2.27336094654718,2.94760543171796,0,0.310298987585686,0,0,0.258355639344024,0.248298857183432,0,0.318235791390825,0,0,0,0.336760265072938,0.358611026963382,0,0.325613074443898,0.106727345877715,0,0.269475606319761,0,0.366724332548599,0.813792356631477,2.66302709674205,0,0.320568492303233 | |||
|short_description=p@chr12:122238579..122238612,+ | |||
}} |
Revision as of 16:23, 11 January 2014
Short description: | p@chr12:122238579..122238612, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122238579..122238612, + |
Coexpression cluster: | C1010_CD19_Neutrophils_Eosinophils_CD14_Mast_CD8_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.73e-45 | 98 |
blood island | 5.73e-45 | 98 |
bone marrow | 5.77e-43 | 76 |
hemolymphoid system | 8.32e-39 | 108 |
bone element | 1.82e-38 | 82 |
skeletal element | 2.04e-33 | 90 |
immune system | 2.99e-33 | 93 |
skeletal system | 2.86e-28 | 100 |
lateral plate mesoderm | 2.90e-17 | 203 |
connective tissue | 3.17e-15 | 371 |
musculoskeletal system | 1.13e-11 | 167 |
mesoderm | 9.47e-07 | 315 |
mesoderm-derived structure | 9.47e-07 | 315 |
presumptive mesoderm | 9.47e-07 | 315 |