FFCP PHASE1:Hg19::chr13:49550881..49550897,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22862 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20296 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-41bp_to_ENST00000337156,uc001vcn.2,uc001vco.2_5end | |||
|coexpression_cluster_id=C1708 | |||
|description=CAGE_peak_9_at_FNDC3A_5end | |||
|id=chr13:49550881..49550897,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.68e-21!45;CL:0002057!9.80e-20!42;CL:0000839!2.70e-15!70;CL:0000557!6.68e-15!71;CL:0000766!2.76e-13!76;CL:0002194!6.26e-13!63;CL:0000576!6.26e-13!63;CL:0000040!6.26e-13!63;CL:0000559!6.26e-13!63;CL:0002009!7.08e-13!65;CL:0002031!3.89e-11!124;CL:0002087!1.60e-09!119;CL:0000738!3.88e-09!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.83e-58;33!CL:0002057;1.83e-58;33!CL:0000473;1.61e-38;39!CL:0000234;1.61e-38;39!CL:0000576;5.82e-27;48!CL:0000766;1.56e-17;69!CL:0000763;1.26e-07;100!CL:0002087;3.67e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.29e-51,42;CL:0002057,3.29e-51,42;CL:0000473,9.89e-44,48;CL:0000234,9.89e-44,48;CL:0000839,4.61e-36,66;CL:0000557,2.14e-35,67;CL:0000766,1.18e-34,72;CL:0002194,2.79e-33,59;CL:0000576,2.79e-33,59;CL:0000040,2.79e-33,59;CL:0000559,2.79e-33,59;CL:0002009,6.19e-32,61;CL:0000763,3.91e-20,108;CL:0000049,3.91e-20,108;CL:0002031,2.05e-18,120;CL:0000738,2.23e-16,136;CL:0002087,1.41e-15,115;CL:0002032,1.94e-12,161;CL:0000837,1.94e-12,161;CL:0000037,1.49e-11,168;CL:0000988,1.59e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;9.06e-38;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.26e-13!80;UBERON:0004765!1.03e-12!101;UBERON:0001434!1.03e-12!101;UBERON:0001474!1.31e-12!86;UBERON:0002390!5.56e-10!102;UBERON:0003061!5.56e-10!102;UBERON:0000062!3.74e-09!511;UBERON:0002405!9.35e-09!115;UBERON:0002193!5.56e-08!112;UBERON:0001737!7.35e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.88e-13;9!UBERON:0001557;2.88e-13;9!UBERON:0003296;7.81e-07;4!UBERON:0010133;7.81e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.65e-32,76;UBERON:0001474,2.76e-29,82;UBERON:0004765,1.07e-27,90;UBERON:0002405,9.12e-25,93;UBERON:0001434,5.21e-24,100;UBERON:0002390,4.76e-23,98;UBERON:0003061,4.76e-23,98;UBERON:0002193,4.29e-20,108;UBERON:0002204,1.54e-13,167;UBERON:0001737,2.04e-13,9;UBERON:0003081,1.50e-09,203;UBERON:0003296,7.70e-07,4;UBERON:0010133,7.70e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0,0,0.204000691244253,0.313454721478088,0,0.273748850145768,0,0.382067028739756,0.410502947249729,0.314843125254717,0.393364276848904,1.91914699048606,0,0,0,0,0,0.142169232487422,0.880801318004542,1.10799081706375,0.802177789880567,0.434021741431704,0.223915474239924,0,0,1.01778767145695,2.64513160582167,0,3.0215774797739,4.93401465626191,9.29119112685311,1.1507695692886,1.7931249457037,4.7296445977717,9.65287906062532,5.16387746867061,13.5426486594342,3.57660445130949,7.64137220161968,6.29225756446237,6.42776173978895,9.9487998393589,8.95071976118658,0.989553900560148,1.39624560335142,1.70489900213078,2.61188314765726,6.80862269629368,4.9825779919646,5.02497330513487,5.21482918420201,7.38442071997397,2.42159801053347,3.68277635987565,3.16462387440884,0.422510572623884,0,0,0.673971786878971,0.150176892841506,0.64290234678832,0,0,0.365328307529268,0,0,0,0.853460445133014,0,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,0,1.12101712596307,0.263384084775077,0.393419540227666,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0.443067789167242,0,0.384273959177026,0,0.822189523018381,0.552700035571697,0,0,0,0,0.679856056185397,0,0.34362744548263,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0,0.795285947051099,0,0,0.221729397462564,0.263504357079378,0.261958150995425,0,0,0.324547393654683,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.860509862246441,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0.597794722207204,0,0.161872944368132,0,1.02077085627447,0,1.13658359293342,0,0,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0,0.30648779579902,0.300476117813194,0.113432183160021,0.538168907066586,0,0.635795703478686,1.20036438433761,0.309157587715317,0.515281080091258,0,1.18143432568886,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.403008392910561,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0.643240938192885,0,0,0,1.30137480043828,1.18009283054671,1.44606617930089,1.10293972732394,1.74303555273925,0.474541238222193,1.34831308160164,1.56977172100277,0.769494313892781,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,1.03993478527958,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0.16798212819886,0,0.268675568108545,0,0,28.5744677979647,0.968532774145487,1.86595303986695,1.15295962733569,0.6312121671319,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,1.06375246633948,1.04007436911366,0,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,0,1.74306691720059,0.099972991182057,0,0,0,0,0,0,1.30303176000821,1.02738161275192,0.358121926479791,0.224170287987055,0,0.215627574859517,0.128343036279748,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0.24538298343828,0,1.35632511849868,0,0.356857977594324,0.473107245101804,0.117141414992713,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0.303127571446259,0,0,0.248107807818777,0,0.280660094433074,0,0,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0,0,0.120859449591622,0,0.184161977871793,0.229628896329213,0,0,0,0.231046011313244,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0.438519753291869,0,0,0,0,2.16386124460217,0.0915694648183434,0.165018999841176,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,2.0911118104818,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0.359744915166629,0.823611089208164,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0.35667105148125,0,0.211107635297664,0,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.355709216742071,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0.284136146806413,0,0,0,0,0.422008249231538,0.667852230137435,0,0,0.597743964753209,0,0.503865495708552,0.20453736500431,0.984678443688556,0.622079175323615,0.179736702294654,0.179021174675609,0,0.197286811273867,0,0,0.969332746095218,0.463840490809256,0,0.260427761085233,0,0,0.227586896570999,0.254253650292766,0.472775363535873,0,0.583209226766509,1.21537496453305,0,0.60298219312704,0,0,0.295547618953547,0,1.52513848926586,0,0,0.683652335082007,0,0,0.108647371922008,0.31900115973192,0.183195186803725,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0,0,0,0.326465616318295,0,1.94749775767882,0,0.707660516026713,0,0.29652112868062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| |||
|short_description=p9@FNDC3A | |||
}} |
Revision as of 17:46, 11 January 2014
Short description: | p9@FNDC3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FNDC3A_5end |
Coexpression cluster: | C1708_Mast_placenta_CD14_small_pituitary_non_parotid |
Association with transcript: | -41bp_to_ENST00000337156, uc001vcn.2, uc001vco.2_5end |
EntrezGene: | FNDC3A |
HGNC: | 20296 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.29e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.29e-51 | 42 |
defensive cell | 9.89e-44 | 48 |
phagocyte | 9.89e-44 | 48 |
myeloid lineage restricted progenitor cell | 4.61e-36 | 66 |
granulocyte monocyte progenitor cell | 2.14e-35 | 67 |
myeloid leukocyte | 1.18e-34 | 72 |
monopoietic cell | 2.79e-33 | 59 |
monocyte | 2.79e-33 | 59 |
monoblast | 2.79e-33 | 59 |
promonocyte | 2.79e-33 | 59 |
macrophage dendritic cell progenitor | 6.19e-32 | 61 |
myeloid cell | 3.91e-20 | 108 |
common myeloid progenitor | 3.91e-20 | 108 |
hematopoietic lineage restricted progenitor cell | 2.05e-18 | 120 |
leukocyte | 2.23e-16 | 136 |
nongranular leukocyte | 1.41e-15 | 115 |
hematopoietic oligopotent progenitor cell | 1.94e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.94e-12 | 161 |
hematopoietic stem cell | 1.49e-11 | 168 |
hematopoietic cell | 1.59e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.65e-32 | 76 |
bone element | 2.76e-29 | 82 |
skeletal element | 1.07e-27 | 90 |
immune system | 9.12e-25 | 93 |
skeletal system | 5.21e-24 | 100 |
hematopoietic system | 4.76e-23 | 98 |
blood island | 4.76e-23 | 98 |
hemolymphoid system | 4.29e-20 | 108 |
musculoskeletal system | 1.54e-13 | 167 |
larynx | 2.04e-13 | 9 |
lateral plate mesoderm | 1.50e-09 | 203 |
gland of diencephalon | 7.70e-07 | 4 |
neuroendocrine gland | 7.70e-07 | 4 |