FFCP PHASE1:Hg19::chr14:89290965..89291047,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=123016 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20087 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TAM2,B3KSL8,G3V2Z9,G3V324,Q86U25 | |||
|association_with_transcript=0bp_to_ENST00000338104,ENST00000345383,ENST00000346301,ENST00000354441,ENST00000380656,ENST00000536576,ENST00000555057,ENST00000556567,ENST00000556651,NM_144596,NM_198309,NM_198310_5end | |||
|description=CAGE_peak_1_at_TTC8_5end | |||
|id=chr14:89290965..89291047,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.41e-13!180;CL:0000057!2.09e-11!75;CL:0002620!2.34e-07!23;CL:0000499!3.12e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.33e-07;23!CL:0000499;2.46e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.35e-11,76;CL:0000499,2.07e-07,28;CL:0002620,2.34e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!5.13e-08!27;DOID:193!9.42e-08!29;DOID:2394!5.11e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:120;5.62e-08;27!DOID:193;1.01e-07;29!DOID:2394;5.57e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:120,5.13e-08,27;DOID:193,9.42e-08,29;DOID:2394,5.11e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!7.51e-18!365;UBERON:0000481!8.27e-11!347;UBERON:0000468!1.48e-10!659;UBERON:0000924!7.91e-10!173;UBERON:0006601!7.91e-10!173;UBERON:0004121!8.22e-10!169;UBERON:0000033!1.73e-09!123;UBERON:0000062!4.37e-09!511;UBERON:0000153!3.77e-08!129;UBERON:0007811!3.77e-08!129;UBERON:0000467!5.94e-08!625;UBERON:0000480!9.10e-08!626;UBERON:0003102!1.40e-07!95;UBERON:0005156!2.96e-07!59;UBERON:0000990!2.96e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.31e-10,171;UBERON:0000924,3.31e-10,171;UBERON:0006601,3.31e-10,171;UBERON:0003102,1.50e-08,99;UBERON:0010314,4.42e-08,132;UBERON:0011216,1.37e-07,223;UBERON:0005156,2.96e-07,59;UBERON:0000990,2.96e-07,59 | |||
|phase1_expression=35.4272839577585,22.6946555324442,43.1320476533672,31.0227224894704,28.6055100433464,52.3403114460221,20.2639902534648,40.4300718993172,14.8875808073908,13.515366507583,7.6758128476967,20.0966062359758,15.5622517154788,40.5953637708953,38.7734929601661,30.9269567367817,29.5320318731749,21.9093027116212,23.9087071407348,24.2548484411272,23.4600794930891,14.7323719094701,23.7575869318777,17.2461775591834,16.9482563452984,0.993374274723366,1.14940825229924,1.18066171970519,5.11373559903575,3.0706351847777,3.40595471295367,25.74379428541,14.457884101356,10.7228662948368,10.1482032760195,17.4868155959528,10.2760153767197,1.10799081706375,1.60435557976113,2.17010870715852,14.1066748771152,17.8141516310439,14.9393829227828,5.08893835728477,4.1566353805769,5.57943340731977,4.41615170120801,3.28934310417461,4.95530193432166,2.3015391385772,3.07392847834921,2.12834006899727,4.48169384957604,4.51839278508678,6.77132432971709,4.89430082810772,4.36649840092553,6.74170453335254,2.75475503133812,3.85114832491312,5.11469700639233,2.30895910130701,2.99195486432448,3.40979800426155,1.7412554317715,2.8369261234557,1.24564449799115,0.502497330513487,1.5644487552606,1.52032191293582,1.81619850790011,2.20966581592539,2.53169909952708,3.16882929467913,5.74031609905618,5.03180749220102,5.16711703273877,3.00353785683013,3.2145117339416,3.42015292489498,6.36533367037088,4.93193215164512,0,1.63841583378639,2.66852776159066,4.26730222566507,4.40435585739614,5.74752439954483,1.32208974556972,0.954053754535364,6.26134266020393,6.45960908308033,6.49864487812889,17.1822727152734,12.8916969485753,17.9101177647052,4.13090517239049,0.786021525498329,1.85041349099558,0.83593247695339,2.60737813306872,0.946895611469467,3.89653456815823,0.779873198196215,0.883817722424512,1.10766947291811,1.35401931882508,0.512365278902701,0.390178042679635,2.13769275984779,1.38175008892924,3.18783394308558,2.37258501059297,4.0131124213457,7.31748666634838,1.24640276967323,3.06576394881537,1.71813722741315,1.77113784413652,1.27426165729639,1.95325036156926,1.90090408889675,3.61380285786655,4.35154477925022,3.74792179657038,1.65744076430812,2.46338399076314,3.02410114837099,2.40696176205157,3.91025890483557,36.5710299470943,31.5229404060709,17.2614458488766,31.8066454098418,32.5869641913328,42.4400300555213,66.8040195522923,36.9842501430003,40.7445061977132,50.5543026214646,37.2419491338854,46.2356136506926,12.0217445136539,17.7976532536526,18.499201438317,18.2836224164231,21.1403157224996,3.10037811596945,1.14398982156026,5.20040501861391,6.75792185046797,12.0432843314857,7.28995053375948,11.8714667804042,13.423981958717,6.60283300656162,8.15080369493561,23.2575083252396,20.6344432358292,14.7277069616455,14.5018554159293,21.2876189601184,13.4234131651493,18.3831540172934,16.2028389576352,19.1994415810771,15.0434679659534,13.4007661775153,6.13266549863533,10.4419222552494,9.89289417224199,2.63560834872127,3.87780264148325,18.3159501899864,24.8485975847659,27.4788210312138,53.3608998677272,49.6227353895448,24.4721183716866,27.473202406973,17.0798393167528,18.2533985828698,33.6107918231748,23.0355249239167,19.615428373615,57.5158225050739,38.0276110156799,15.2308930691968,34.0254483745049,18.8255701109668,26.7513138187724,18.4372162870711,18.6153886023351,17.5563508377811,46.3429968748608,23.829857558483,38.747167940912,47.5201142912821,34.8646370282765,18.2032272387605,15.8095991199572,23.5670559535693,21.1450298583619,47.1008996323111,40.8249187419179,39.5369256580735,24.3385655428687,17.5819883898033,49.1527601787482,50.6131011500005,56.7977495107626,57.9175815442896,69.1482471189925,71.8817106727305,55.2767063304822,32.0675031258406,36.1491289148047,87.3420858884636,74.5604179002625,74.1955400798347,58.5765827652414,40.3008392910561,37.4728909006178,22.4182589669424,21.8196896472668,27.2464365619554,12.3193443190891,11.9276791489337,14.4080489158203,17.2077351325515,13.3730050964083,18.6138453128673,21.9029345261742,38.5944562915731,15.1948413487729,40.8643776668142,30.3189382301226,24.3712008082078,21.0730862597627,24.8241360779986,20.7352668736901,24.6203771824419,26.8115799595539,17.9325639853019,27.2747836524231,19.6221050042659,8.11971000087113,15.426595118379,25.1060146912154,14.7008711385542,24.0834566161479,29.4848165003288,27.767125614026,3.97316789473185,10.822982591794,33.627290818511,25.4620662148011,8.99214026060957,21.2116131788541,22.9619343993153,9.77424915930974,17.6788913497528,25.9796415645492,28.634810028844,32.8744343860301,16.3134085970013,13.4265798647217,13.3177906564219,30.0277671224525,34.3394464837949,10.8335482678455,24.8044521047592,15.7549032026052,33.7441802352397,51.2345491006522,38.9881517416563,31.3454829459969,34.8760726216754,19.5525166374258,7.38994856843915,9.86142460948132,19.6961709763733,21.1856331522933,12.7504857760644,36.3207955351207,24.0652708101715,23.4434894420094,11.9750712215894,20.976808511478,46.5531739658072,38.8723948377586,29.6026062671752,56.6748089483264,28.0885634694239,53.25994689220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| |||
|short_description=p1@TTC8 | |||
}} |
Revision as of 21:24, 11 January 2014
Short description: | p1@TTC8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TTC8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000338104, ENST00000345383, ENST00000346301, ENST00000354441, ENST00000380656, ENST00000536576, ENST00000555057, ENST00000556567, ENST00000556651, NM_144596, NM_198309, NM_198310_5end |
EntrezGene: | TTC8 |
HGNC: | 20087 |
UniProt: | Q8TAM2B3KSL8G3V2Z9G3V324Q86U25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.35e-11 | 76 |
stromal cell | 2.07e-07 | 28 |
skin fibroblast | 2.34e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.31e-10 | 171 |
ectoderm | 3.31e-10 | 171 |
presumptive ectoderm | 3.31e-10 | 171 |
surface structure | 1.50e-08 | 99 |
structure with developmental contribution from neural crest | 4.42e-08 | 132 |
organ system subdivision | 1.37e-07 | 223 |
reproductive structure | 2.96e-07 | 59 |
reproductive system | 2.96e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 5.13e-08 | 27 |
reproductive organ cancer | 9.42e-08 | 29 |
ovarian cancer | 5.11e-07 | 14 |