FFCP PHASE1:Hg19::chr15:45344875..45344879,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_at_chr15:45344875..45344879,+ | |||
|id=chr15:45344875..45344879,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.79e-37!42;CL:0000860!3.12e-33!45;CL:0000839!5.30e-26!70;CL:0000557!6.79e-26!71;CL:0000766!1.41e-25!76;CL:0002009!2.15e-24!65;CL:0000738!6.68e-24!140;CL:0002194!8.95e-23!63;CL:0000576!8.95e-23!63;CL:0000040!8.95e-23!63;CL:0000559!8.95e-23!63;CL:0002031!1.69e-22!124;CL:0000763!5.95e-22!112;CL:0000049!5.95e-22!112;CL:0002032!3.32e-20!165;CL:0000837!3.32e-20!165;CL:0000037!7.71e-20!172;CL:0000566!7.71e-20!172;CL:0000988!2.10e-17!182;CL:0002087!4.51e-17!119;CL:0000134!2.53e-07!358;CL:0000048!4.53e-07!430;CL:0000034!6.16e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.44e-36;33!CL:0002057;4.44e-36;33!CL:0000473;3.39e-27;39!CL:0000234;3.39e-27;39!CL:0000576;4.85e-22;48!CL:0000766;3.15e-16;69!CL:0000763;2.42e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.83e-42,42;CL:0002057,4.83e-42,42;CL:0000473,1.29e-39,48;CL:0000234,1.29e-39,48;CL:0000839,9.19e-33,66;CL:0000557,1.12e-32,67;CL:0000766,2.25e-32,72;CL:0002009,8.72e-31,61;CL:0002194,8.85e-29,59;CL:0000576,8.85e-29,59;CL:0000040,8.85e-29,59;CL:0000559,8.85e-29,59;CL:0000763,9.30e-26,108;CL:0000049,9.30e-26,108;CL:0000738,2.29e-20,136;CL:0002031,8.66e-20,120;CL:0002032,3.46e-17,161;CL:0000837,3.46e-17,161;CL:0000037,1.85e-16,168;CL:0000988,1.11e-14,177;CL:0002087,2.76e-14,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.91e-30;42!CL:0000049;1.12e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.84e-22!80;UBERON:0001474!1.99e-19!86;UBERON:0004765!9.08e-18!101;UBERON:0001434!9.08e-18!101;UBERON:0002390!1.29e-14!102;UBERON:0003061!1.29e-14!102;UBERON:0002193!3.36e-13!112;UBERON:0002405!1.90e-12!115;UBERON:0001737!6.04e-10!9;UBERON:0002204!6.74e-10!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.43e-11;9!UBERON:0001557;1.43e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.86e-28,76;UBERON:0004765,1.93e-25,90;UBERON:0001474,4.51e-25,82;UBERON:0002405,2.68e-21,93;UBERON:0001434,2.72e-21,100;UBERON:0002390,1.92e-19,98;UBERON:0003061,1.92e-19,98;UBERON:0002193,2.78e-16,108;UBERON:0002204,9.78e-13,167;UBERON:0001737,1.40e-11,9;UBERON:0003081,4.12e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,3.61616716814386,2.92124036154949,4.39139518911456,0,0,0,0,0,0,0,0,0,1.96682138424452,0,6.65709330259127,0,0,0,0,0,0,0,0,0,0,0,0,3.05336301437086,16.2486655786188,15.0402117936446,3.0215774797739,22.2030659531786,31.2803434604055,7.48000220037591,5.63553554364021,21.0469184600841,4.82643953031266,31.6287494956075,12.1883837934908,3.20011977222428,30.019676506363,36.1804809956586,7.03992952453076,5.1348644332175,33.2455305415501,2.30895910130701,3.98927315243264,11.08184351385,6.09439401120026,30.0714169086304,33.0095791967655,2.76373531782418,28.1600775946909,27.5829832775498,6.05399502633369,16.5724936194404,27.5322277073569,6.12640330304631,7.44115049877652,6.28975936525128,0.786300418025466,3.00353785683013,4.8217676009124,1.71007646244749,5.9675003159727,7.12390199682072,1.75996244461323,0.546138611262131,1.77901850772711,0.426730222566507,0.400395987036012,1.14950487990897,0.661044872784862,0.954053754535364,0,0,0,0,3.92355994087075,0.526768169550154,0,0,0,2.34061093546949,0.32592226663359,0.946895611469467,7.79306913631645,3.7879555340959,3.53527088969805,5.53834736459053,7.58250818542044,2.5618263945135,1.69077151827842,2.13769275984779,1.93445012450094,1.15921234294021,3.70716407905151,6.68852070224283,4.18142095219907,3.62589896632212,1.53288197440768,1.37450978193052,10.1207876807801,0.318565414324097,0.651083453856419,0,4.81840381048873,6.01537072425766,0,0.947109008176067,1.64225599384209,0,0.267440195783507,0,0,0,4.73091478821062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,3.71457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,5.27121669744253,3.87780264148325,0,0,0,3.04541115870403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0,0,0,2.19409231913646,0,0,0,12.6083924318673,0,0,0,0,0,0,0,0,0,0,2.77552935963191,4.01475094983413,0,0,0,0,0,2.36613600079688,9.27215795429559,8.67639707580535,2.86764329104224,8.49729831960384,9.49082476444386,2.42696354688296,7.45641567476315,10.3881732375525,0,0,0,0,0,0,0,0,0,5.66173773985134,0,0,0,0,0,0,0,5.68058984377876,1.29149563659404,0,0.925971025153221,0.951270761172991,0,0,0,0,0,2.81201501960331,15.4543557942951,11.9091081683605,0,0,0,0,1.40877494421162,4.56121854189699,3.45887888200707,2.27236380167484,1.58744735730423,0,0,0,0,0.901029173531752,10.861404439962,0,0,0,0,0,5.917119267892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52934218861764,8.43335757932127,0,0,14.2636905040718,0,0,0,0,0,0,0,0.254094624222463,0,0,0,5.74144876487847,0,0,0,0,0,0,2.49565033836969,3.03329280955175,2.83864347061082,1.52283839490527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83654933220156,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,1.5686127061494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59405764980503,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62357900818653,0,0,0,1.43411352204052,5.60019533774791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0,2.27235358192189,0,0,0,0,3.21654377823046,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,3.2454681417118,0,0,0,0,0,0,0,15.2796470232122,2.96964680832639,0,39.7659059106519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1718621730214,0,3.05163472634166,0,0,0,0,0,0,0,0,0.0897576444097721,0,8.93203247249374,5.03786763710243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,4.80336230967832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6759719350419,0,1.76828463311521,1.37539436597234,2.49264202817511,9.44890344516302,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23207390903876,0,0,0,0,0,0,0,0,0,0,1.63205341010842,0,0.919036730290385,1.63936315354902,0,12.4049545195378,5.00307686098049,0,1.72022758707021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77962244319307,0,0,0,0,0,1.34940933649081,0,2.90294345488599,0,3.65221543268214,0.150257608997218,6.85449381903832,0,0,0,4.17630383890644,4.77715066438339,0,3.77735275701072,5.05124233148879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4710597657209,0.930053882193542,4.41626564490779,0,0,0,0,0,0,0,0,3.35710818526667,4.97661808026378,0,0.107824811396682,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,14.1696576325585,0.159633859057151,0,0,0.0691572524642179,0,4.28308260777463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68646859168308,0,0,0,0,0,0,0,4.82131652290458,0,1.21393120847326,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,7.13474687027936,3.82215575590973,0,0,0,1.29485767437579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.29169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:45344875..45344879,+ | |||
}} |
Revision as of 23:18, 11 January 2014
Short description: | p@chr15:45344875..45344879, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:45344875..45344879, + |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.83e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.83e-42 | 42 |
defensive cell | 1.29e-39 | 48 |
phagocyte | 1.29e-39 | 48 |
myeloid lineage restricted progenitor cell | 9.19e-33 | 66 |
granulocyte monocyte progenitor cell | 1.12e-32 | 67 |
myeloid leukocyte | 2.25e-32 | 72 |
macrophage dendritic cell progenitor | 8.72e-31 | 61 |
monopoietic cell | 8.85e-29 | 59 |
monocyte | 8.85e-29 | 59 |
monoblast | 8.85e-29 | 59 |
promonocyte | 8.85e-29 | 59 |
myeloid cell | 9.30e-26 | 108 |
common myeloid progenitor | 9.30e-26 | 108 |
leukocyte | 2.29e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 8.66e-20 | 120 |
hematopoietic oligopotent progenitor cell | 3.46e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.46e-17 | 161 |
hematopoietic stem cell | 1.85e-16 | 168 |
hematopoietic cell | 1.11e-14 | 177 |
nongranular leukocyte | 2.76e-14 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.86e-28 | 76 |
skeletal element | 1.93e-25 | 90 |
bone element | 4.51e-25 | 82 |
immune system | 2.68e-21 | 93 |
skeletal system | 2.72e-21 | 100 |
hematopoietic system | 1.92e-19 | 98 |
blood island | 1.92e-19 | 98 |
hemolymphoid system | 2.78e-16 | 108 |
musculoskeletal system | 9.78e-13 | 167 |
larynx | 1.40e-11 | 9 |
lateral plate mesoderm | 4.12e-07 | 203 |