FFCP PHASE1:Hg19::chr16:58004992..58005021,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1258 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2151 | |||
|TSSclassifier=strong | |||
|UniProt=Q14028 | |||
|association_with_transcript=0bp_to_ENST00000251102,ENST00000311183,NM_001135639,NM_001297,uc002emt.2,uc002emu.2,uc010cdh.2_5end | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_1_at_CNGB1_5end | |||
|id=chr16:58004992..58005021,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.37e-44;3 | |||
|ontology_enrichment_disease=DOID:5409!1.86e-17!4;DOID:1325!2.14e-10!7;DOID:3904!2.14e-10!7;DOID:3905!2.75e-08!9 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.63e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.57e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!2.18e-34!2;UBERON:0002757!2.18e-34!2;UBERON:0010134!2.18e-34!2;UBERON:0002784!2.18e-34!2;UBERON:0005408!2.18e-34!2;UBERON:0001899!2.18e-34!2;UBERON:0003296!9.51e-18!4;UBERON:0010133!9.51e-18!4;UBERON:0000966!2.25e-14!5;UBERON:0005388!2.25e-14!5;UBERON:0001802!2.25e-14!5;UBERON:0000970!1.04e-13!20;UBERON:0002104!4.50e-13!21;UBERON:0000020!5.77e-12!23;UBERON:0001032!1.77e-11!24;UBERON:0004456!1.77e-11!24;UBERON:0001894!1.46e-10!7;UBERON:0006222!1.46e-10!7;UBERON:0002148!1.86e-09!2;UBERON:0009662!1.86e-09!2;UBERON:0003127!2.02e-09!2;UBERON:0000019!1.66e-08!19;UBERON:0000047!1.66e-08!19;UBERON:0004088!1.66e-08!19;UBERON:0003072!1.66e-08!19;UBERON:0003071!1.66e-08!19;UBERON:0004128!1.66e-08!19;UBERON:0000063!6.36e-08!97;UBERON:0001456!9.51e-08!21;UBERON:0003056!9.18e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.84e-66;2!UBERON:0002757;2.84e-66;2!UBERON:0010134;2.84e-66;2!UBERON:0005408;2.84e-66;2!UBERON:0001899;2.84e-66;2!UBERON:0003296;8.36e-34;4!UBERON:0010133;8.36e-34;4!UBERON:0002784;8.36e-34;4!UBERON:0000966;2.91e-27;5!UBERON:0005388;2.91e-27;5!UBERON:0001802;2.91e-27;5!UBERON:0001894;7.84e-20;7!UBERON:0000970;1.20e-15;20!UBERON:0002104;6.08e-15;21!UBERON:0000020;1.03e-13;23!UBERON:0001032;3.55e-13;24!UBERON:0004456;3.55e-13;24!UBERON:0000019;6.04e-08;19!UBERON:0000047;6.04e-08;19!UBERON:0004088;6.04e-08;19!UBERON:0010230;6.04e-08;19!UBERON:0001456;2.82e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.84e-66,2;UBERON:0002757,2.84e-66,2;UBERON:0010134,2.84e-66,2;UBERON:0005408,2.84e-66,2;UBERON:0001899,2.84e-66,2;UBERON:0003296,8.36e-34,4;UBERON:0010133,8.36e-34,4;UBERON:0002784,8.36e-34,4;UBERON:0000966,6.78e-23,6;UBERON:0005388,6.78e-23,6;UBERON:0001802,6.78e-23,6;UBERON:0001894,7.84e-20,7;UBERON:0006222,7.84e-20,7;UBERON:0000970,6.23e-15,21;UBERON:0002104,6.23e-15,21;UBERON:0000020,3.63e-13,24;UBERON:0001032,3.63e-13,24;UBERON:0004456,3.63e-13,24;UBERON:0003056,4.43e-09,61;UBERON:0000019,1.38e-07,20;UBERON:0000047,1.38e-07,20;UBERON:0010312,1.38e-07,20;UBERON:0004088,1.38e-07,20;UBERON:0010230,1.38e-07,20;UBERON:0003072,1.38e-07,20;UBERON:0004128,1.38e-07,20;UBERON:0003071,1.38e-07,20;UBERON:0001456,5.57e-07,22;UBERON:0003075,6.64e-07,82;UBERON:0007284,6.64e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,182.140477069109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.4277248397235,93.8231584990519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,113.862134873414,1.10609528212909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97892930141772,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@CNGB1 | |||
}} |
Revision as of 11:42, 20 January 2014
Short description: | p1@CNGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNGB1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000251102, ENST00000311183, NM_001135639, NM_001297, uc002emt.2, uc002emu.2, uc010cdh.2_5end |
EntrezGene: | CNGB1 |
HGNC: | 2151 |
UniProt: | Q14028 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.84e-66 | 2 |
regional part of epithalamus | 2.84e-66 | 2 |
secretory circumventricular organ | 2.84e-66 | 2 |
circumventricular organ | 2.84e-66 | 2 |
epithalamus | 2.84e-66 | 2 |
gland of diencephalon | 8.36e-34 | 4 |
neuroendocrine gland | 8.36e-34 | 4 |
regional part of diencephalon | 8.36e-34 | 4 |
retina | 6.78e-23 | 6 |
photoreceptor array | 6.78e-23 | 6 |
posterior segment of eyeball | 6.78e-23 | 6 |
diencephalon | 7.84e-20 | 7 |
future diencephalon | 7.84e-20 | 7 |
eye | 6.23e-15 | 21 |
visual system | 6.23e-15 | 21 |
sense organ | 3.63e-13 | 24 |
sensory system | 3.63e-13 | 24 |
entire sense organ system | 3.63e-13 | 24 |
pre-chordal neural plate | 4.43e-09 | 61 |
camera-type eye | 1.38e-07 | 20 |
simple eye | 1.38e-07 | 20 |
immature eye | 1.38e-07 | 20 |
ocular region | 1.38e-07 | 20 |
eyeball of camera-type eye | 1.38e-07 | 20 |
optic cup | 1.38e-07 | 20 |
optic vesicle | 1.38e-07 | 20 |
eye primordium | 1.38e-07 | 20 |
face | 5.57e-07 | 22 |
neural plate | 6.64e-07 | 82 |
presumptive neural plate | 6.64e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.57e-09 | 4 |