FFCP PHASE1:Hg19::chr17:6915752..6915776,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440400 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33911 | |||
|TSSclassifier=strong | |||
|UniProt=F8W1G5 | |||
|association_with_transcript=-3bp_to_ENST00000546395_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_RNASEK_5end | |||
|id=chr17:6915752..6915776,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.40e-32!76;CL:0002009!8.58e-31!65;CL:0002194!9.98e-30!63;CL:0000576!9.98e-30!63;CL:0000040!9.98e-30!63;CL:0000559!9.98e-30!63;CL:0000763!3.73e-29!112;CL:0000049!3.73e-29!112;CL:0000557!1.64e-28!71;CL:0000839!1.96e-27!70;CL:0000860!2.67e-27!45;CL:0002057!3.58e-27!42;CL:0000063!4.58e-10!578;CL:0000988!5.71e-08!182;CL:0002371!6.08e-08!591;CL:0002032!7.95e-08!165;CL:0000837!7.95e-08!165;CL:0000037!1.93e-07!172;CL:0000566!1.93e-07!172;CL:0000738!2.85e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.04e-21;33!CL:0002057;3.04e-21;33!CL:0000473;6.47e-21;39!CL:0000234;6.47e-21;39!CL:0000576;3.61e-18;48!CL:0000766;1.87e-14;69!CL:0000763;1.14e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.46e-32,72;CL:0000473,2.94e-31,48;CL:0000234,2.94e-31,48;CL:0002009,1.05e-30,61;CL:0002194,1.26e-29,59;CL:0000576,1.26e-29,59;CL:0000040,1.26e-29,59;CL:0000559,1.26e-29,59;CL:0000763,2.27e-28,108;CL:0000049,2.27e-28,108;CL:0000557,2.77e-28,67;CL:0000860,1.49e-27,42;CL:0002057,1.49e-27,42;CL:0000839,3.48e-27,66;CL:0000988,6.15e-08,177;CL:0002032,6.37e-08,161;CL:0000837,6.37e-08,161;CL:0000738,1.41e-07,136;CL:0000037,1.45e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-20;42!CL:0000049;1.33e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.00e-27!112;UBERON:0003081!6.82e-26!216;UBERON:0002390!1.98e-25!102;UBERON:0003061!1.98e-25!102;UBERON:0002371!6.73e-25!80;UBERON:0002405!3.27e-22!115;UBERON:0001474!5.21e-21!86;UBERON:0004765!7.41e-18!101;UBERON:0001434!7.41e-18!101;UBERON:0002204!2.37e-14!167;UBERON:0000926!5.59e-14!448;UBERON:0004120!5.59e-14!448;UBERON:0006603!5.59e-14!448;UBERON:0000467!5.77e-07!625;UBERON:0000480!9.05e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.76e-27,108;UBERON:0002390,6.50e-25,98;UBERON:0003061,6.50e-25,98;UBERON:0002371,1.96e-24,76;UBERON:0003081,6.01e-24,203;UBERON:0002405,1.51e-23,93;UBERON:0001474,1.91e-20,82;UBERON:0004765,2.98e-18,90;UBERON:0001434,1.97e-15,100;UBERON:0000926,9.93e-13,315;UBERON:0004120,9.93e-13,315;UBERON:0006603,9.93e-13,315;UBERON:0002204,5.28e-12,167 | |||
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| |||
|short_description=p2@RNASEK | |||
}} |
Revision as of 13:23, 20 January 2014
Short description: | p2@RNASEK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNASEK_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -3bp_to_ENST00000546395_5end |
EntrezGene: | RNASEK |
HGNC: | 33911 |
UniProt: | F8W1G5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.46e-32 | 72 |
defensive cell | 2.94e-31 | 48 |
phagocyte | 2.94e-31 | 48 |
macrophage dendritic cell progenitor | 1.05e-30 | 61 |
monopoietic cell | 1.26e-29 | 59 |
monocyte | 1.26e-29 | 59 |
monoblast | 1.26e-29 | 59 |
promonocyte | 1.26e-29 | 59 |
myeloid cell | 2.27e-28 | 108 |
common myeloid progenitor | 2.27e-28 | 108 |
granulocyte monocyte progenitor cell | 2.77e-28 | 67 |
classical monocyte | 1.49e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.49e-27 | 42 |
myeloid lineage restricted progenitor cell | 3.48e-27 | 66 |
hematopoietic cell | 6.15e-08 | 177 |
hematopoietic oligopotent progenitor cell | 6.37e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.37e-08 | 161 |
leukocyte | 1.41e-07 | 136 |
hematopoietic stem cell | 1.45e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.76e-27 | 108 |
hematopoietic system | 6.50e-25 | 98 |
blood island | 6.50e-25 | 98 |
bone marrow | 1.96e-24 | 76 |
lateral plate mesoderm | 6.01e-24 | 203 |
immune system | 1.51e-23 | 93 |
bone element | 1.91e-20 | 82 |
skeletal element | 2.98e-18 | 90 |
skeletal system | 1.97e-15 | 100 |
mesoderm | 9.93e-13 | 315 |
mesoderm-derived structure | 9.93e-13 | 315 |
presumptive mesoderm | 9.93e-13 | 315 |
musculoskeletal system | 5.28e-12 | 167 |