FFCP PHASE1:Hg19::chr17:32598164..32598178,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6354 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10634 | |||
|TSSclassifier=weak | |||
|UniProt=P80098 | |||
|association_with_transcript=2bp_to_AF043338_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_CCL7_5end | |||
|id=chr17:32598164..32598178,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.19e-100!42;CL:0000860!1.42e-93!45;CL:0002194!5.15e-69!63;CL:0000576!5.15e-69!63;CL:0000040!5.15e-69!63;CL:0000559!5.15e-69!63;CL:0002009!9.45e-67!65;CL:0000839!1.19e-61!70;CL:0000557!1.03e-60!71;CL:0000766!2.11e-56!76;CL:0000763!1.34e-36!112;CL:0000049!1.34e-36!112;CL:0002087!3.97e-34!119;CL:0002031!1.57e-32!124;CL:0000738!3.54e-28!140;CL:0002032!4.72e-23!165;CL:0000837!4.72e-23!165;CL:0000037!6.98e-22!172;CL:0000566!6.98e-22!172;CL:0000988!2.30e-20!182;CL:0000134!6.50e-11!358;CL:0002320!1.40e-10!365;CL:0000048!1.11e-09!430;CL:0000723!1.87e-09!436;CL:0000219!2.07e-09!390;CL:0000034!3.63e-09!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.19e-114;33!CL:0002057;2.19e-114;33!CL:0000473;6.20e-86;39!CL:0000234;6.20e-86;39!CL:0000576;4.64e-55;48!CL:0000766;1.75e-30;69!CL:0000763;4.77e-17;100!CL:0002087;3.49e-14;104!CL:0000738;1.33e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.56e-101,42;CL:0002057,2.56e-101,42;CL:0000473,3.77e-96,48;CL:0000234,3.77e-96,48;CL:0002194,2.75e-76,59;CL:0000576,2.75e-76,59;CL:0000040,2.75e-76,59;CL:0000559,2.75e-76,59;CL:0002009,1.01e-73,61;CL:0000839,5.54e-68,66;CL:0000557,6.18e-67,67;CL:0000766,3.95e-62,72;CL:0000763,1.60e-40,108;CL:0000049,1.60e-40,108;CL:0002087,7.10e-38,115;CL:0002031,3.59e-36,120;CL:0000738,1.50e-31,136;CL:0002032,3.76e-26,161;CL:0000837,3.76e-26,161;CL:0000037,6.33e-25,168;CL:0000988,1.73e-23,177;CL:0000134,5.77e-10,354;CL:0002320,1.06e-09,361;CL:0000219,9.21e-09,386;CL:0000048,1.30e-07,427;CL:0000723,1.87e-07,433;CL:0000034,3.01e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;9.53e-75;42!CL:0000049;6.83e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.47e-53!80;UBERON:0001474!2.92e-49!86;UBERON:0004765!3.03e-44!101;UBERON:0001434!3.03e-44!101;UBERON:0002390!1.03e-40!102;UBERON:0003061!1.03e-40!102;UBERON:0002193!1.34e-36!112;UBERON:0002405!1.67e-35!115;UBERON:0002204!1.85e-28!167;UBERON:0003081!3.26e-22!216;UBERON:0002384!3.96e-10!375;UBERON:0000926!6.89e-10!448;UBERON:0004120!6.89e-10!448;UBERON:0006603!6.89e-10!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.83e-59,76;UBERON:0001474,2.98e-54,82;UBERON:0004765,3.40e-49,90;UBERON:0002405,1.61e-47,93;UBERON:0002390,5.95e-45,98;UBERON:0003061,5.95e-45,98;UBERON:0001434,5.37e-44,100;UBERON:0002193,1.60e-40,108;UBERON:0002204,4.29e-25,167;UBERON:0003081,4.77e-20,203;UBERON:0000926,1.17e-11,315;UBERON:0004120,1.17e-11,315;UBERON:0006603,1.17e-11,315;UBERON:0002384,2.45e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581592955118259,0.755751887377619,0,2.09186133215116,2.46700732813095,0.619412741790207,12.0830804775303,5.89169625016932,13.4794871036494,2.41321976515633,0.645484683583826,0,1.69418105588344,1.36453075028923,1.34834090667051,7.34601341690166,1.92557416245656,1.91801137739712,2.96866170168044,2.99195486432448,2.98357325372886,6.96502172708602,0.56738522469114,3.11411124497787,14.0699252543776,11.9941071236646,8.47036494349955,3.63239701580021,1.47311054395026,2.53169909952708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CCL7 | |||
}} |
Revision as of 14:42, 20 January 2014
Short description: | p2@CCL7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCL7_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 2bp_to_AF043338_5end |
EntrezGene: | CCL7 |
HGNC: | 10634 |
UniProt: | P80098 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.56e-101 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.56e-101 | 42 |
defensive cell | 3.77e-96 | 48 |
phagocyte | 3.77e-96 | 48 |
monopoietic cell | 2.75e-76 | 59 |
monocyte | 2.75e-76 | 59 |
monoblast | 2.75e-76 | 59 |
promonocyte | 2.75e-76 | 59 |
macrophage dendritic cell progenitor | 1.01e-73 | 61 |
myeloid lineage restricted progenitor cell | 5.54e-68 | 66 |
granulocyte monocyte progenitor cell | 6.18e-67 | 67 |
myeloid leukocyte | 3.95e-62 | 72 |
myeloid cell | 1.60e-40 | 108 |
common myeloid progenitor | 1.60e-40 | 108 |
nongranular leukocyte | 7.10e-38 | 115 |
hematopoietic lineage restricted progenitor cell | 3.59e-36 | 120 |
leukocyte | 1.50e-31 | 136 |
hematopoietic oligopotent progenitor cell | 3.76e-26 | 161 |
hematopoietic multipotent progenitor cell | 3.76e-26 | 161 |
hematopoietic stem cell | 6.33e-25 | 168 |
hematopoietic cell | 1.73e-23 | 177 |
mesenchymal cell | 5.77e-10 | 354 |
connective tissue cell | 1.06e-09 | 361 |
motile cell | 9.21e-09 | 386 |
multi fate stem cell | 1.30e-07 | 427 |
somatic stem cell | 1.87e-07 | 433 |
stem cell | 3.01e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.83e-59 | 76 |
bone element | 2.98e-54 | 82 |
skeletal element | 3.40e-49 | 90 |
immune system | 1.61e-47 | 93 |
hematopoietic system | 5.95e-45 | 98 |
blood island | 5.95e-45 | 98 |
skeletal system | 5.37e-44 | 100 |
hemolymphoid system | 1.60e-40 | 108 |
musculoskeletal system | 4.29e-25 | 167 |
lateral plate mesoderm | 4.77e-20 | 203 |
mesoderm | 1.17e-11 | 315 |
mesoderm-derived structure | 1.17e-11 | 315 |
presumptive mesoderm | 1.17e-11 | 315 |
connective tissue | 2.45e-09 | 371 |