FFCP PHASE1:Hg19::chr17:42875115..42875157,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr17:42875115..42875157,- | |||
|id=chr17:42875115..42875157,- | |||
|ontology_enrichment_celltype=CL:0002594!8.09e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002594;4.36e-15;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,3.38e-15,4 | |||
|ontology_enrichment_development_v019=UBERON:0006603;5.09e-11;65!UBERON:0005795;1.82e-09;10!UBERON:0005062;5.67e-09;4!UBERON:0007284;5.67e-09;4!UBERON:0007297;9.43e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.26e-12;3!DOID:127;5.26e-12;3!DOID:0060072;4.13e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.59e-12,3;DOID:127,6.59e-12,3;DOID:0060072,4.88e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.09e-27!115;UBERON:0000481!4.76e-09!347;UBERON:0005156!5.12e-09!59;UBERON:0000990!5.12e-09!59;UBERON:0000468!5.15e-09!659;UBERON:0003133!1.23e-08!48;UBERON:0000922!1.11e-07!612;UBERON:0000062!1.56e-07!511;UBERON:0000059!1.61e-07!11;UBERON:0000467!3.19e-07!625;UBERON:0001155!3.37e-07!9;UBERON:0000480!3.71e-07!626;UBERON:0001310!8.09e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004175;2.07e-16;21!UBERON:0001310;4.36e-15;4!UBERON:0006947;1.75e-12;3!UBERON:0004054;1.75e-12;3!UBERON:0003978;8.07e-12;3!UBERON:0000946;8.07e-12;3!UBERON:0000160;1.14e-11;17!UBERON:0000059;1.52e-11;11!UBERON:0005409;3.22e-11;22!UBERON:0003133;4.77e-11;44!UBERON:0001155;6.52e-10;9!UBERON:0003975;1.76e-09;18!UBERON:0005904;1.83e-09;4!UBERON:0003135;1.38e-08;11!UBERON:0004921;1.48e-08;33!UBERON:0002081;2.20e-08;2!UBERON:0002133;2.86e-08;2!UBERON:0003134;1.28e-07;33!UBERON:0000995;1.72e-07;17!UBERON:0005156;2.93e-07;59!UBERON:0000990;2.93e-07;59!UBERON:0000966;4.49e-07;5!UBERON:0005388;4.49e-07;5!UBERON:0001802;4.49e-07;5!UBERON:0010260;9.87e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.08e-16,114;UBERON:0001310,3.38e-15,4;UBERON:0003133,4.85e-14,48;UBERON:0004175,1.73e-13,25;UBERON:0006947,1.51e-12,3;UBERON:0004054,1.51e-12,3;UBERON:0005156,1.59e-12,59;UBERON:0000990,1.59e-12,59;UBERON:0003978,8.87e-12,3;UBERON:0009751,8.87e-12,3;UBERON:0000946,8.87e-12,3;UBERON:0002523,8.87e-12,3;UBERON:0005983,8.87e-12,3;UBERON:0002165,8.87e-12,3;UBERON:0002062,8.87e-12,3;UBERON:0007280,8.87e-12,3;UBERON:0000160,9.70e-12,17;UBERON:0000059,1.19e-11,11;UBERON:0001155,4.97e-10,9;UBERON:0005409,8.40e-10,25;UBERON:0005904,1.64e-09,4;UBERON:0003135,1.43e-08,11;UBERON:0002081,2.42e-08,2;UBERON:0010227,2.42e-08,2;UBERON:0002133,3.03e-08,2;UBERON:0003134,4.35e-08,37;UBERON:0000474,4.35e-08,37;UBERON:0005795,1.33e-07,22;UBERON:0003975,1.40e-07,22;UBERON:0003100,4.07e-07,41;UBERON:0010260,8.86e-07,9 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0.175669571386252,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0.515281080091258,0.18611685633159,0,0,0,0,0,0,0.201504196455281,0.169560592310488,0,0,0,0.243947412259191,0,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.514703430895577,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68053230485111,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.447749509444357,0,0,2.56450125116389,2.95213181129735,0.650756789328606,0.515205058238611,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.429374660225974,0.372158369359667,2.21465597303108,0.571890581771475,0.255897791311334,0,0,0,1.43897966066652,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.545999645631943,0,0,0,0,0.438450885253763,0,0,3.24656603140326,3.717881977197,1.69017361519345,0.717056761020258,0.196498082026242,2.49669736036875,1.77380532035299,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,9.56390343605135,1.93398740871803,0,0,0,0,0,0,0,59.481973599071,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,1.09692698576986,0,0,26.0861376327872,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,1.99052386215701,3.09601475761687,5.49927130440263,0,0,0,0.202203398942031,1.60515529459758,0,0,0,0,21.7021421567165,3.62972148145992,0,0.379119477770928,0,0,0,0,0,0,0,0.277349346026277,0,0,0,2.97035336011451,0,0,0,0,4.84945082442097,0,1.35588444468319,0,0,0.316553979779393,0,0,3.41524791582964,0,0,0,0,0,0,0,0,0.104602846312333,0,0.577901179803038,0,0,0,0,0,3.6306712165393,4.12488763221031,1.43574604915363,0,0,0.223171457441873,0.940568614814168,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485996453264197,0,0.394028536495991,0.0524545881349981,0,0,0,5.71756261098694,0,0,2.17199840701485,7.77799342081141,2.28611152076586,0,0,0,0,0,0,0,0,0,0,0.213574825135389,1.57204305099666,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0.983617892129413,0,0,0,0,0,0.221858103073705,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,1.5652351854352,0,0,0.406870733204662,1.45478927362048,0,0,1.59238355479446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0537709353984,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.6124909547064,0.0642292250964595,0,0,0,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,2.288292572803,0,0,1.27857558193737,0,0,0,0,0,0.202612753855184,0,0,0.317079050969534,0,0,22.8257142059075,0,0,0,0,0,0,0.975726071789027,0,0,0.0679697329768317,0.131545547125698,0,0,40.5809290037157,0,0,9.13158720509496,0,0,1.21510125100316,0,0,0,0,0,0,0,0,0,0,18.2056431582099,0,0,0,0,0,0,0,0.615976841137482,0,0.485710993059139,0,0,0,0,0,0,1.92935395269862,0,0,80.1635012135271,0,0,0,0.4226557275834,0,0.281951753939561,0.0644578879735772,0,0,0,0,2.92134555298607,0.458729283404541,0.286679166302903,0,0.135982980381829,0,1.0580536810308,0,0,0.432626562123789,0,0,0,0.305966489225945,0,0,0,1.28823786971007,0.267964130156178,0,0.103432995861895,0.213233981900981,0,0,0,0.112131862580613,0.12729431655633,0.606351566874658,1.30630048738177,0.684466602170562,0.336760265072938,0.573777643141411,0.665320713092027,0,0,0,0,28.1569130884145,9.90155697881218,8.13792356631477,4.66029741929859,0.805095174364105,0 | |||
|short_description=p@chr17:42875115..42875157,- | |||
}} |
Revision as of 15:42, 20 January 2014
Short description: | p@chr17:42875115..42875157, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:42875115..42875157, - |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 3.38e-15 | 4 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.08e-16 | 114 |
umbilical artery | 3.38e-15 | 4 |
reproductive organ | 4.85e-14 | 48 |
internal genitalia | 1.73e-13 | 25 |
male genital duct | 1.51e-12 | 3 |
internal male genitalia | 1.51e-12 | 3 |
reproductive structure | 1.59e-12 | 59 |
reproductive system | 1.59e-12 | 59 |
valve | 8.87e-12 | 3 |
cardiac mesenchyme | 8.87e-12 | 3 |
cardial valve | 8.87e-12 | 3 |
tunica intima | 8.87e-12 | 3 |
heart layer | 8.87e-12 | 3 |
endocardium | 8.87e-12 | 3 |
endocardial cushion | 8.87e-12 | 3 |
presumptive endocardium | 8.87e-12 | 3 |
intestine | 9.70e-12 | 17 |
large intestine | 1.19e-11 | 11 |
colon | 4.97e-10 | 9 |
gastrointestinal system | 8.40e-10 | 25 |
duct of male reproductive system | 1.64e-09 | 4 |
male reproductive organ | 1.43e-08 | 11 |
cardiac atrium | 2.42e-08 | 2 |
future cardiac atrium | 2.42e-08 | 2 |
atrioventricular valve | 3.03e-08 | 2 |
female reproductive organ | 4.35e-08 | 37 |
female reproductive system | 4.35e-08 | 37 |
embryonic uterus | 1.33e-07 | 22 |
internal female genitalia | 1.40e-07 | 22 |
female organism | 4.07e-07 | 41 |
umbilical blood vessel | 8.86e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.59e-12 | 3 |
leiomyoma | 6.59e-12 | 3 |
benign neoplasm | 4.88e-09 | 4 |