FFCP PHASE1:Hg19::chr17:48270438..48270450,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-30bp_to_X98708_5end | |||
|coexpression_cluster_id=C763 | |||
|description=CAGE_peak_2_at_X98708_5end | |||
|id=chr17:48270438..48270450,- | |||
|ontology_enrichment_celltype=CL:0000945!3.02e-50!24;CL:0000826!3.02e-50!24;CL:0000838!2.09e-30!52;CL:0000542!8.67e-30!53;CL:0000051!8.67e-30!53;CL:0000785!4.11e-18!2;CL:0000955!4.11e-18!2;CL:0000818!4.11e-18!2;CL:0000954!4.11e-18!2;CL:0000816!4.11e-18!2;CL:0000236!2.19e-15!14;CL:0000080!3.62e-14!6;CL:0000817!2.12e-12!3;CL:0002087!7.80e-12!119;CL:0002031!2.90e-11!124;CL:0000988!5.82e-11!182;CL:0000946!4.85e-10!1;CL:0000786!4.85e-10!1;CL:0000980!4.85e-10!1;CL:0000819!8.24e-10!1;CL:0000738!1.03e-09!140;CL:0002032!6.93e-08!165;CL:0000837!6.93e-08!165;CL:0000037!1.81e-07!172;CL:0000566!1.81e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.79e-23;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.58e-23,24;CL:0000826,4.58e-23,24;CL:0000838,8.96e-11,52;CL:0000542,1.42e-10,53;CL:0000051,1.42e-10,53;CL:0000988,1.04e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.71e-21!10;DOID:0060060!4.44e-10!1;DOID:0060061!4.44e-10!1;DOID:8691!4.44e-10!1;DOID:630!6.33e-10!1;DOID:0050177!6.33e-10!1;DOID:0050427!6.33e-10!1;DOID:0060073!8.24e-10!1;DOID:8675!8.24e-10!1;DOID:2355!1.07e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.10e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.10e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002331!1.06e-08!10;UBERON:0000358!1.06e-08!10;UBERON:0000307!1.06e-08!10;UBERON:0000091!1.06e-08!10;UBERON:0000087!1.06e-08!10;UBERON:0007806!1.06e-08!10;UBERON:0008780!1.06e-08!10;UBERON:0005728!1.06e-08!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.28e-20;10!UBERON:0000178;5.39e-14;15!UBERON:0000179;5.39e-14;15!UBERON:0000463;5.39e-14;15!UBERON:0002390;3.28e-11;32!UBERON:0000478;5.43e-09;24!UBERON:0002106;1.40e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.28e-20,10;UBERON:0000358,1.28e-20,10;UBERON:0000307,1.28e-20,10;UBERON:0000091,1.28e-20,10;UBERON:0000087,1.28e-20,10;UBERON:0007010,1.28e-20,10;UBERON:0007806,1.28e-20,10;UBERON:0008780,1.28e-20,10;UBERON:0005728,1.28e-20,10;UBERON:0000178,5.39e-14,15;UBERON:0000179,5.39e-14,15;UBERON:0000463,5.39e-14,15;UBERON:0000478,5.43e-09,24;UBERON:0002106,1.51e-08,3;UBERON:0004854,1.51e-08,3;UBERON:0009034,1.51e-08,3;UBERON:0002095,1.51e-08,3;UBERON:0004782,1.51e-08,3;UBERON:0003281,1.51e-08,3;UBERON:0009664,1.51e-08,3;UBERON:0002296,1.51e-08,3;UBERON:0005602,1.51e-08,3;UBERON:0001179,1.51e-08,3;UBERON:0006293,1.51e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8272960126742,4.02292888304734,3.38456359648821,0,0,0,0,0,0,0,1.84820002233648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.764546456250458,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63390144493182,2.96553453471607,3.02823653565821,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09935271517422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p2@X98708 | |||
}} |
Revision as of 16:13, 20 January 2014
Short description: | p2@X98708 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_X98708_5end |
Coexpression cluster: | C763_cord_B_splenic_xeroderma_b_hairy_mycosis |
Association with transcript: | -30bp_to_X98708_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.58e-23 | 24 |
pro-B cell | 4.58e-23 | 24 |
lymphoid lineage restricted progenitor cell | 8.96e-11 | 52 |
lymphocyte | 1.42e-10 | 53 |
common lymphoid progenitor | 1.42e-10 | 53 |
hematopoietic cell | 1.04e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.28e-20 | 10 |
blastocyst | 1.28e-20 | 10 |
blastula | 1.28e-20 | 10 |
bilaminar disc | 1.28e-20 | 10 |
inner cell mass | 1.28e-20 | 10 |
cleaving embryo | 1.28e-20 | 10 |
connecting stalk | 1.28e-20 | 10 |
inner cell mass derived epiblast | 1.28e-20 | 10 |
extraembryonic mesoderm | 1.28e-20 | 10 |
blood | 5.39e-14 | 15 |
haemolymphatic fluid | 5.39e-14 | 15 |
organism substance | 5.39e-14 | 15 |
extraembryonic structure | 5.43e-09 | 24 |
spleen | 1.51e-08 | 3 |
gastrointestinal system mesentery | 1.51e-08 | 3 |
stomach region | 1.51e-08 | 3 |
mesentery | 1.51e-08 | 3 |
gastrointestinal system serosa | 1.51e-08 | 3 |
mesentery of stomach | 1.51e-08 | 3 |
gut mesentery | 1.51e-08 | 3 |
dorsal mesentery | 1.51e-08 | 3 |
dorsal mesogastrium | 1.51e-08 | 3 |
peritoneal cavity | 1.51e-08 | 3 |
spleen primordium | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.10e-09 | 10 |