FFCP PHASE1:Hg19::chr19:14530112..14530140,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10212 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17821 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N5M0 | |||
|association_with_transcript=0bp_to_ENST00000324340_5end | |||
|description=CAGE_peak_2_at_DDX39A_5end | |||
|id=chr19:14530112..14530140,- | |||
|ontology_enrichment_celltype=CL:0000988!5.02e-37!182;CL:0000037!6.50e-35!172;CL:0000566!6.50e-35!172;CL:0000003!1.78e-34!722;CL:0002032!8.50e-33!165;CL:0000837!8.50e-33!165;CL:0000012!2.22e-32!682;CL:0000548!1.94e-30!679;CL:0000004!1.94e-30!679;CL:0000255!1.94e-30!679;CL:0000063!2.06e-27!578;CL:0000219!3.42e-26!390;CL:0000144!5.62e-26!625;CL:0000738!8.92e-24!140;CL:0002031!1.29e-23!124;CL:0002371!1.35e-23!591;CL:0002087!1.76e-22!119;CL:0000134!7.93e-22!358;CL:0000034!1.34e-20!444;CL:0002320!4.52e-20!365;CL:0000723!4.15e-19!436;CL:0000048!1.04e-18!430;CL:0000542!3.84e-17!53;CL:0000051!3.84e-17!53;CL:0000838!1.31e-16!52;CL:0000763!8.55e-16!112;CL:0000049!8.55e-16!112;CL:0000860!3.18e-09!45;CL:0002057!1.04e-08!42;CL:0000084!1.46e-08!25;CL:0000827!1.46e-08!25;CL:0000557!3.27e-08!71;CL:0000839!6.09e-08!70;CL:0000945!1.41e-07!24;CL:0000826!1.41e-07!24;CL:0002009!2.79e-07!65;CL:0000115!3.42e-07!35;CL:0000766!4.83e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.56e-10;53!CL:0000084;1.41e-08;25!CL:0002087;2.44e-08;104!CL:0000945;1.23e-07;24!CL:0000860;1.34e-07;33!CL:0002057;1.34e-07;33!CL:0000988;7.49e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.01e-37,177;CL:0000037,3.95e-35,168;CL:0002032,5.15e-33,161;CL:0000837,5.15e-33,161;CL:0000219,4.30e-25,386;CL:0000738,5.83e-24,136;CL:0002031,7.26e-24,120;CL:0002087,9.88e-23,115;CL:0000134,7.68e-21,354;CL:0000034,2.67e-19,441;CL:0002320,4.00e-19,361;CL:0000723,7.28e-18,433;CL:0000048,1.76e-17,427;CL:0000542,3.84e-17,53;CL:0000051,3.84e-17,53;CL:0000838,1.31e-16,52;CL:0000763,6.15e-16,108;CL:0000049,6.15e-16,108;CL:0000860,1.04e-08,42;CL:0002057,1.04e-08,42;CL:0000084,1.46e-08,25;CL:0000827,1.46e-08,25;CL:0000557,2.61e-08,67;CL:0000839,4.92e-08,66;CL:0000473,9.22e-08,48;CL:0000234,9.22e-08,48;CL:0000945,1.41e-07,24;CL:0000826,1.41e-07,24;CL:0000115,1.68e-07,36;CL:0002009,2.28e-07,61;CL:0000766,4.35e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000051;1.56e-10;53!CL:0002057;4.69e-07;42 | |||
|ontology_enrichment_disease=DOID:2531!4.32e-17!51;DOID:0060083!4.32e-17!51;DOID:1240!1.02e-14!39;DOID:8692!2.53e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.11e-11;39!DOID:2531;1.30e-10;51!DOID:0060083;1.30e-10;51!DOID:8692;5.07e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.32e-17,51;DOID:0060083,4.32e-17,51;DOID:1240,1.02e-14,39;DOID:8692,2.53e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!5.74e-19!375;UBERON:0002193!3.03e-10!112;UBERON:0002390!1.65e-09!102;UBERON:0003061!1.65e-09!102;UBERON:0001474!4.76e-08!86;UBERON:0002371!5.46e-08!80;UBERON:0002405!4.22e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.82e-18,371;UBERON:0002193,2.74e-10,108;UBERON:0002405,3.25e-10,93;UBERON:0002390,1.47e-09,98;UBERON:0003061,1.47e-09,98;UBERON:0001474,4.27e-08,82;UBERON:0002371,4.74e-08,76 | |||
|phase1_expression=6.90377841228115,8.77812147953031,6.48390258841467,6.00439790118782,3.12872766099101,5.23403114460221,10.1319951267324,12.6343974685366,4.96252693579693,20.8873846026283,35.5878595665938,10.4851858622483,4.22027165165526,4.08428964768154,3.64537113300707,2.6893005858071,1.20538905604795,2.19093027116212,2.92759679274304,25.1166958476647,17.9520608294943,15.3592813524263,10.304495536718,16.1511821586003,13.8096903554283,20.8608597691907,23.8091709404843,20.858357048125,24.781949441481,49.8978217526376,30.653592416583,20.2272669385364,18.6747669642515,2.9580320813343,45.0859107377355,20.898877175651,18.7904281174302,23.2678071583389,25.469144828708,27.5603805809132,8.95661896959697,6.15397965436061,6.43938919085466,13.6674344452791,21.5389287902621,16.0105480383959,23.7077617643798,30.4264237136151,30.3512243477202,12.3707728698525,15.8819638048042,20.3374717704183,14.1345729102014,25.819387343353,29.7938270507552,21.2713843683143,24.834459655264,27.1915416178552,16.2224462956578,27.5998963285441,18.5407766481722,12.8642007072819,14.5608470063791,15.344091019177,18.5733912722294,16.4541715160431,19.3074897188628,14.0699252543776,17.2089363078666,23.0220175387424,12.1079900526674,27.9891003350549,22.1523671208619,9.29523259772544,12.5436536979376,12.5795187305026,6.73971786878971,5.55654503513573,4.17886525412408,8.83539505597871,7.75775041076451,12.2384983022305,21.1195493353587,17.4764355603882,13.3426388079533,18.3493995703598,11.6114836240444,12.0698012390441,11.8988077101275,13.3567525634951,47.2446764360842,47.566212339046,38.6095960406481,18.5039860010636,54.369330609209,22.6510312906566,27.3426580458228,30.6548394944348,32.4850368419225,12.5389871543009,11.4072793321757,12.7830907548378,15.5861382726329,15.9316953345798,20.3278076157638,14.621237042519,17.060643417196,18.0608760813202,19.1187240913021,22.0346792168926,21.5553013872962,21.4454283443939,8.45233410023744,8.02622484269139,7.31748666634838,21.3021564271424,18.0113631992903,14.0887252647878,14.4221224451117,13.3797474016121,14.9749194386976,19.9594929334159,11.5942841689885,10.1109422811991,8.74515085866421,14.680189626729,8.21127996921047,51.8129330087562,60.7089244428562,43.3024967609569,2.43806866313962,11.4019146149618,5.4980901592718,11.2046137239216,6.51739283826656,5.5041677205113,10.3387173116643,6.32625331393427,12.3840610484929,9.09090529596512,7.64162635530197,9.16853528483989,9.10738220731355,17.4268688108682,4.54366351116557,3.30846500868608,3.72282289452822,17.40981557429,9.72391348326217,11.8866400425461,16.8948046261699,24.9468032580776,19.4398680900253,9.61023501270816,13.0044825225071,14.8563742647636,21.9444714863651,18.3475899010223,10.3172216179146,13.0541038978221,14.5018554159293,23.5684352772739,8.05404789908959,12.5005447317595,16.2028389576352,15.8060519062821,15.2679973385795,15.9908302286318,26.0638283692002,20.8838445104988,19.0529813687624,15.8136500923276,11.6334079244498,10.4662572514208,1.98788780678127,14.3092478180975,11.51959873075,18.6443803486729,16.3147455811244,6.16745360156538,8.5399196583764,10.6067045819379,6.22422070799533,6.60082293141472,14.7115712802113,5.75158225050739,2.88087962239999,7.26396438684769,9.98912245857026,28.5235910772225,7.17353666648645,15.3839193223332,16.5110403255494,18.9608589048035,5.9204709663919,13.3889405869827,4.54633437173368,4.75201142912821,5.19260551484969,20.9337113245746,8.62341770179486,13.4668891163253,11.6360223480927,7.75779523355712,7.46261955497424,9.19463387397059,3.45547535485173,19.7371998698437,19.553470290086,4.69826255400848,5.08636562782948,26.7081075515118,7.21367704669072,9.27505944164265,3.90845398296339,19.2405018755043,9.06164147999147,13.8838575834263,3.40584624976508,2.26304479546337,10.6502877754984,11.7879954926339,15.2604533079439,10.2428252176547,6.81865301477087,5.73609190778008,12.3193443190891,10.3373219290759,11.3870064012128,9.01851178633723,14.3822884999108,6.56959246336494,15.6449532329816,9.00537313470039,29.0083334840209,1.85747171212792,2.88751792667834,24.4895076082477,23.9390259910904,25.5471691676491,23.6029101647323,25.2740155147191,23.7270619111097,29.7977191033963,28.4521124431752,35.3967384390679,15.5012645471176,26.6459370226547,15.6398124305932,7.3504355692771,3.80265104465493,4.91413608338813,5.90789906681404,46.795088537953,8.48620225947483,7.3774158428366,5.5972645558399,16.8602629886429,8.84654957222351,3.98130314181677,9.12263254868909,11.4392826380754,20.2063878835383,7.07175470347969,2.81780866165972,14.8697441193906,17.5934494779112,11.2249949818413,18.9649055510226,22.3206402144667,6.15542515218493,6.31811515875942,8.17471392588005,12.185398418281,6.04735661515894,8.50650583454319,6.00042102109084,9.00965209393282,17.6356032415997,9.85326475791887,13.8236041400765,25.2940300959742,9.07955706526857,23.1023653170275,14.0965325328615,15.6615254478894,19.926966025708,23.9501424431787,15.2184689200919,21.925043222606,6.85983438313388,26.0144115681237,8.7192013766656,19.9480137432984,6.07577064061555,10.7296933755565,22.823174319012,9.83971031364021,10.4007436911366,27.5211890460492,11.3479305618623,24.244418290465,1.85871391755592,8.68194568626309,13.9950857252731,26.3846309277925,1.42156779497018,15.0470855857352,3.31583314765545,6.10073421020206,3.89894665610022,15.8110914833548,6.52934218861764,12.6500363689819,11.9812427745791,5.7430967917057,2.85273810081437,9.26600362672507,8.01357657946495,10.7436577943937,43.8252913014692,56.744858938155,66.8445482064504,53.2623600560956,12.9588258353456,10.4111883086097,20.1055091322201,12.7312361654105,7.01732626818479,1.49801404789436,2.99161459204025,2.07207756718018,1.47229790062968,1.50051156317903,3.52644530809656,2.07970861530807,6.0665856191035,2.68094105557689,2.22568688486155,3.00946099727719,2.27407504055985,8.27784570340039,9.29915837949611,11.4308884495856,8.94901229021253,13.9018821798546,7.89229874764969,15.9211380114623,21.7871342826803,33.0855429190677,30.0096295731797,3.32870879020994,7.55975733324201,4.71404834855676,15.3461973288062,4.49056151092918,3.20347873139252,5.11707249066703,6.11244900345709,4.45254199334973,19.2762117253319,11.5415121453533,16.6718126708033,6.23105315020345,18.9422916889734,8.58102092100518,4.41114234667227,2.02578175658972,13.0888470907652,12.20010825645,3.2781103739856,18.9503837421113,6.62331899097967,26.6678921520131,17.5367069583913,4.53872004239366,43.2186859469407,20.5813383384584,23.7507507712353,26.2186329573492,20.5919292533328,11.0371750248068,17.5864628401076,14.959368160717,17.2383561136077,30.4771228537849,33.4637377311873,14.3612070065178,11.15249795379,5.53143270929315,3.81251743096572,15.3836700894817,21.6999984791146,4.59412430396938,9.75090369054782,1.6068392984416,3.86682873168488,18.177736819528,18.7274483165878,13.6458206759685,7.51941714077915,11.3113021253098,15.5112461897304,5.34192213880424,1.81813406897076,3.0750410778417,13.1441093869422,1.6185244936888,2.78907329578371,6.2962469366128,5.5762981612848,8.00887308457831,14.9045688488766,7.82939692867565,5.00375391580584,4.57999637574372,17.863601729264,9.49138274156178,7.62520775695299,19.960027722284,3.42351190427136,8.59148769400029,10.20433232259,7.3747707609159,8.23611089208164,8.7181177735808,12.5353138575456,6.34041284692033,8.42516912477962,28.2827568671962,3.65570234446927,6.33900880540533,6.6884956589913,2.68670320712054,6.78048699721457,6.06501877900737,5.97095077717098,4.38450885253763,11.5755106853338,4.59126326432643,6.69604243976923,14.2518809125885,15.211562536741,8.89150383665119,4.22470876356421,2.85336841185,15.2547257550357,5.2776908824416,3.62224382255892,22.0094440784115,18.1966054527391,9.52598915982569,16.0872546128589,19.6003772750381,1.97701981631236,5.16606447205476,11.7930032967338,9.75546337780687,2.29723400206959,8.62660935694688,8.41100927856613,6.83576624608995,8.09988036556483,6.58179636937911,7.13320642311989,5.94034580961926,4.75875105776562,9.934638614855,0.962479855263359,13.9672923109188,28.9852953196121,45.0119944486508,32.4406805668768,47.5090292731891,38.5188186865336,26.0447303380019,20.9556846896644,28.5667307441609,16.5670335086941,18.4870090016886,34.1562172785191,15.038068625404,17.4370531135651,33.0811434713621,18.7673727687674,13.6270796060904,14.0837191349864,19.0489273871244,21.6965824655643,19.6881987220052,40.4453357482223,27.2838050417337,9.84699191581699,20.0137202072228,10.3252310079324,12.6888304579065,5.61421621224659,4.68826173670061,7.16027078322129,28.7523931435894,9.37649284461163,3.10367830158997,5.04839957415486,0.921482106297696,0,2.67271891179974,4.89758302100786,19.9412687814379,7.17826387635178,1.79323189425963,12.4327761989016,7.55798243562828,4.49982203009481,13.1700741843344,3.73247505194169,13.1207792675097,6.80280463767315,25.5786185113436,2.56472854656027,0,8.89095921157095,1.93866549219044,2.04089815956073,1.99613798001194,5.72941074387513,8.2212399996424,4.34999745260876,5.12070517284748,1.77977555204936,12.5285471337006,15.8581951691074,21.2871367769776,13.8899995946634,1.77148277162768,2.77371808838438,0,4.20201187738654,3.54657142744257,1.97446857438575,12.0921694506079,9.20196712238782,2.6932590476329,10.2547850262301,2.76676685265672,3.14151755434202,3.36806852958225,6.06102203490647,7.23620987874712,1.06606955203727,84.8204375024613,16.3259466650826,16.4549565081155,18.2732485099916,18.2338156915498,19.9707688501253,26.9450300468343,18.9134528986651,10.3389051618733,11.2630637629812,6.9263005002631,4.11138415509973,3.98104772431402,4.5113357896703,0.611030144933625,42.9955636586902,38.5519489513089,36.9653701249312,4.71807930864739,2.40773294189637,3.27970224015475,39.7751440490152,2.15231080825299,12.8673601153069,0.394584402849391,3.62972148145992,4.89716418608784,5.05492637027904,91.0959921651825,23.6409076385723,1.32930774541437,3.30991955875499,1.56966459203613,1.19472429772959,0.853828638089378,8.5978297268146,10.0664648234376,6.76147542159206,13.4941770199624,2.62090002363045,12.8989524353712,17.5128959633244,12.6444518559101,19.0507860363445,4.65547279144413,3.88326957442601,0.677942222341597,9.31885087597906,9.33958675004052,1.96263467463224,8.99536360580094,2.56508224804908,4.4825128895264,11.5889573557636,8.21315377778404,18.2113187903806,14.413979820405,5.33002752556154,3.47907099583211,3.53541051925193,14.6776542559503,21.4435834940283,6.01789484054299,7.80166592734101,3.60252173225874,3.69644523008381,22.994385852055,7.73577794555923,21.2938756966245,3.35138881526705,3.43740636017525,5.0251111720377,4.99197501247478,5.15071257763885,4.01708623395371,4.97157696401774,0.720599767084807,3.49487848582361,8.58736687148738,9.31299199707181,9.16688196416914,5.11822903876694,18.1200930620779,2.38568906942791,4.08610218334727,10.2882015017612,11.5533126741676,9.13968743664207,35.7708487566886,24.7616625458544,1.88323625639876,4.36065093879046,4.1767024868575,4.19636705079985,1.5840050477911,7.35078091264664,2.30298236783334,2.1440859791201,1.98627591109629,10.6792785814995,3.80099721227599,3.45688596480507,7.51150928251641,15.5649249031234,28.9786598245167,5.28202867534807,7.81853431488867,4.54311924402056,1.32506888912221,2.84422503995411,4.23144325576608,5.47477881229854,1.40963004463334,3.52398461473392,3.30129040709298,2.07119527673598,7.44249032717926,17.3898236070191,23.2623862907511,13.4051664131738,1.08803560673895,3.7603484103405,2.45076461410769,2.62298104567844,3.29813602125492,2.65820453990096,1.58634144372552,3.254964198369,0.573409195690071,5.21366542223206,3.72578417648301,9.4077071756637,12.6230212041728,8.79564881741557,9.42035600698392,3.2937214757744,16.8600566090477,23.3322856063429,16.2687735146693,11.451952182514,17.7537875680836,6.62910518462812,8.0501728560824,4.44905610798268,3.66144109435078,7.56154618816195,14.7665340553641,11.9762671491603,11.787960770114,3.59842489730884,8.22893671444175,8.29412415681711,3.98762571836992,7.82617592717601,6.46107718688039,5.33127297036314,15.8679585949818,10.1835249153433,9.77436069086645,4.64033759878494,3.58286299828754,22.0015270564734,6.86791410365586,7.40848875285022,3.78554694685953,2.11881813448034,10.2931963859964,7.82982875895635,20.8569451471291,6.01958433241968,8.56578465772636,13.610751922193,19.4544911711412,7.89422578483346,19.7891843459387,19.6772319036333,15.3737620994296,10.5059022621058,38.342767932163,12.1543982470953,3.31820246764154,11.1070376038451,9.16767398162205,7.0333119530013,2.94848863961771,4.66968526632067,5.91673945404156,19.3987773979282,25.2859399375114,3.44429959321631,3.40509572140102,28.3523163387835,2.79759015438889,8.70908164046162,8.18523976343371,34.8274140811282,11.7949456391922,21.0774601710587,11.2023469769657,5.31437300254207,12.8893194829362,7.26238393365217,2.54403480522735,33.5951033705339,23.2165517002786,4.58478726797889,4.8999276376512,3.08300280463006,1.41696576325585,3.03304332208587,3.07674546361133,3.52900374710405,3.25039086581824,2.90656162137332,1.42769420259154,12.2684648126282,4.48284948721413,4.58571496304198,5.08312931061488,7.24625981387618,10.3553988909015,21.0851195443251,2.48194083552549,7.66479261073376,3.12605604493237,2.3571602503328,8.02482395799474,6.06209953489886,3.10672889244615,1.56215619722769,3.30698874401895,2.15613754659283,1.09394961803644,3.28954660114309,2.97726707033577,13.89382830441,3.44958554626907,0.535701835878287,0.672567444437648,1.21393120847326,3.64259506162076,2.83847584520444,22.9315635236001,3.42976018874837,3.12660771693426,2.82822926320251,10.1646703160213,16.5734788819183,3.76766845682467,2.67096502857203,4.20408244970683,4.56579360254748,7.55746569265175,5.7330202546446,2.85906176706625,14.0632114442127,8.02065835040064,7.99748052591865,2.40513409419076,3.31545862660859,5.8044282211943,2.76503864725637,1.29068207646083,9.11156405625353,8.52134047591577,1.69354820076372,13.0590915070109,11.1674298839155,21.0218566575035,6.04019331708079,15.9984880792846,13.7767255229964,1.29485767437579,2.05325613712494,2.3196288626764,1.94284397223656,12.8666704904158,12.9318003854889,10.5838880792036,13.7794220087531,13.6326240764332,8.15199355260037,4.09023037972107,5.02686989159102,22.1049129289916,2.69663153929296,5.18488403623577,0.981542335574726,3.86160320425212,2.9585900930838,3.0586880643807,10.902134485663,13.9873616902662,28.9829352182294,2.14264726326789,3.88184358887261,8.66606760243017,2.19100916473955,0.458729283404541,6.59362082496676,15.9349277815116,3.87551494088214,0.872701380680755,3.7031878836078,8.55588541783528,6.47045880083986,5.19151874548547,6.68682051625918,7.75785560942238,6.08152804854898,11.014793612134,9.88704399482574,11.1192828437162,4.76344324655513,11.3668047327359,23.0449151934314,2.48750831837634,3.62015485516633,5.11761556562354,3.09483760902862,19.8287953196539,14.3392590023432,3.92461519032147,2.10035622317944,1.0105859447911,7.18465268059972,4.10679961302337,12.9315941788008,5.80949863680678,2.99394320891412,15.2224112302522,11.633280700671,1.9307228228694,2.33545525477126,4.69281884806909,4.40069199058319,4.06896178315738,3.32878387092756,11.8751538218705,21.1575204920134 | |||
|short_description=p2@DDX39A | |||
}} |
Revision as of 21:48, 20 January 2014
Short description: | p2@DDX39A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DDX39A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000324340_5end |
EntrezGene: | DDX39A |
HGNC: | 17821 |
UniProt: | Q8N5M0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.82e-18 | 371 |
hemolymphoid system | 2.74e-10 | 108 |
immune system | 3.25e-10 | 93 |
hematopoietic system | 1.47e-09 | 98 |
blood island | 1.47e-09 | 98 |
bone element | 4.27e-08 | 82 |
bone marrow | 4.74e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.32e-17 | 51 |
immune system cancer | 4.32e-17 | 51 |
leukemia | 1.02e-14 | 39 |
myeloid leukemia | 2.53e-10 | 31 |