FFCP PHASE1:Hg19::chr19:42011981..42012002,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_at_chr19:42011981..42012002,+ | |||
|id=chr19:42011981..42012002,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.78e-24!42;CL:0000860!2.55e-22!45;CL:0000557!2.60e-20!71;CL:0000839!1.08e-19!70;CL:0000763!4.97e-19!112;CL:0000049!4.97e-19!112;CL:0000766!9.01e-19!76;CL:0002009!2.07e-18!65;CL:0002194!2.59e-17!63;CL:0000576!2.59e-17!63;CL:0000040!2.59e-17!63;CL:0000559!2.59e-17!63;CL:0000738!2.83e-17!140;CL:0000037!5.10e-17!172;CL:0000566!5.10e-17!172;CL:0002032!9.93e-17!165;CL:0000837!9.93e-17!165;CL:0002031!1.43e-16!124;CL:0000988!9.26e-16!182;CL:0002087!6.39e-13!119;CL:0000034!1.14e-09!444;CL:0000048!3.11e-09!430;CL:0000003!3.15e-09!722;CL:0000723!8.73e-09!436;CL:0000219!6.28e-08!390;CL:0000134!7.12e-08!358;CL:0002371!1.76e-07!591;CL:0002320!2.20e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.07e-34;33!CL:0002057;1.07e-34;33!CL:0000473;4.86e-28;39!CL:0000234;4.86e-28;39!CL:0000576;3.20e-21;48!CL:0000766;1.29e-16;69!CL:0000763;1.19e-09;100!CL:0000453;2.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.06e-40,42;CL:0002057,1.06e-40,42;CL:0000473,1.99e-40,48;CL:0000234,1.99e-40,48;CL:0000557,1.04e-34,67;CL:0000839,1.28e-33,66;CL:0000766,3.63e-32,72;CL:0000763,2.78e-31,108;CL:0000049,2.78e-31,108;CL:0002009,6.71e-31,61;CL:0002194,5.66e-29,59;CL:0000576,5.66e-29,59;CL:0000040,5.66e-29,59;CL:0000559,5.66e-29,59;CL:0000738,1.65e-25,136;CL:0000037,1.41e-24,168;CL:0002032,2.51e-24,161;CL:0000837,2.51e-24,161;CL:0002031,5.42e-24,120;CL:0000988,5.09e-22,177;CL:0002087,1.67e-17,115;CL:0000034,1.61e-08,441;CL:0000048,2.64e-08,427;CL:0000134,4.21e-08,354;CL:0000723,8.48e-08,433;CL:0002320,1.77e-07,361;CL:0000453,2.02e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.42e-29;42!CL:0000049;2.07e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.46e-18!80;UBERON:0001474!1.17e-15!86;UBERON:0004765!5.70e-14!101;UBERON:0001434!5.70e-14!101;UBERON:0002390!2.51e-12!102;UBERON:0003061!2.51e-12!102;UBERON:0002405!2.85e-12!115;UBERON:0002193!3.26e-11!112;UBERON:0002204!6.37e-11!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.91e-10;9!UBERON:0001557;4.91e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.05e-31,76;UBERON:0001474,2.53e-27,82;UBERON:0004765,5.42e-27,90;UBERON:0002405,3.45e-25,93;UBERON:0001434,2.14e-22,100;UBERON:0002390,8.52e-21,98;UBERON:0003061,8.52e-21,98;UBERON:0002193,4.03e-19,108;UBERON:0002204,8.89e-14,167;UBERON:0001737,5.56e-10,9;UBERON:0003081,3.73e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,24.2037052722639,17.4781413126953,18.9880623500717,9.27072317701963,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0.125542639594803,0.0764134057479513,0.0821005894499457,0,10.6208354749204,4.22212337906934,21.2098088943024,0,0,0.369754010166788,0.0774672005803016,0,4.11040615068786,0,0,0.434021741431704,0,0,0,12.2134520574834,23.806184452395,22.8029017516547,15.3403164357752,25.903576945375,26.944454267874,18.1246207162955,13.8326781525714,31.2156543452932,16.5477926753577,27.1103567105207,24.3767675869815,17.6947799170048,24.5615535052061,33.0343522134274,19.2832852193669,37.2277671408269,30.0488449125549,13.5239033076554,14.9597743216224,17.9014395223732,21.4754836585152,39.1495805036886,39.8606239357168,15.3261685806613,26.5956288394303,31.0580047928317,13.9241885605675,40.1422623226445,36.3931745557017,25.561889643745,26.7881417955955,33.5453832813401,11.0082058523565,20.4240574264449,32.145117339416,5.13022938734247,37.595251990628,34.7061892152804,3.51992488922645,2.18455444504853,0.889509253863555,1.70692089026603,2.00197993518006,0.574752439954483,0.661044872784862,2.86216126360609,0,0,0,1.32171328579026,3.36305137788922,11.0621315605532,0.196709770113833,0,0.205601498999509,17.5545820160212,0.977766799900771,4.2610302516126,1.94826728407911,18.8283672135943,15.3195071886915,17.7227115666897,13.5401931882508,7.30120522436348,6.24284868287415,6.08420247033602,2.76350017785848,12.7513357723423,6.22803565280654,8.56130649887082,6.27213142829861,17.4496387754252,2.68254345521345,1.37450978193052,18.2174178254042,2.86708872891687,3.25541726928209,2.85135613334512,4.36667845325541,6.78329039118417,1.24930726552346,2.60454977248419,4.10563998460523,0,0.534880391567015,0,0,0,17.9007586580942,0,0.50133791063589,0,0.795285947051099,0,0.283604451492204,0.221729397462564,0,0,0,0,0.324547393654683,0,0,0.238490624305342,4.57595928624102,4.08603251462521,0.79504962946682,0,0.694281003215189,0.56530794192401,0,0.275118041940067,0,0.775250277507987,0,0,0.805658634218294,0,0,0,0,0.17859945656816,0.44905874525234,0.225222960966644,0,0,0,6.58902087180316,0,0,0,0.12663051166458,9.00382429529888,0,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0.485618833104395,0.421352420106746,0.408308342509787,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0.831192346452549,0,0.30648779579902,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,11.4767905924061,0.292311015483596,0,0.0920498986422993,13.5782687727802,0,0.302256294682921,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0.243947412259191,0,0.232387885739037,0.10366105501537,8.83122978064699,8.39447925874409,0,0,0,0,0,13.1320548044227,17.1956383879664,16.3887500320768,11.0293972732394,16.5588377510229,20.1680026244432,9.57302287937167,14.1279454890249,19.6221050042659,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0.122988438543114,13.2107213929865,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,9.97001482785661,17.0242606641941,0.144366447761074,11.1116523018387,10.8444866773721,0,0,0.492434012174795,0.234004265139238,0.148631162288728,1.87467667973554,20.6618017684597,24.1017665312057,0.0895585227028483,0,0,0,17.1694446325791,19.4888428608326,15.8531948758658,17.1689709459877,14.668013581491,0,0,0,0.102827492703324,9.91132090884928,8.00314011365619,0.224262168690721,0.43596006883328,0.2933531432838,0.517086863031111,0,6.762422020448,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,4.35766729300147,0.099972991182057,20.6760427090024,21.5970549315814,27.4084121327941,0,0,22.8219048065149,0.289562613335158,0,0.179060963239896,0.112085143993527,0.197030760201927,0.646882724578552,0.128343036279748,0,0,0,0,5.10351001322531,0,0,0.828831026872071,0.12269149171914,0,0.271265023699736,5.19927153827018,6.24501460790066,3.6271555457805,5.73992933464295,0,0,1.03473071292505,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0,0.215714200818617,0.213455115606889,0,0,0,0,7.98002261097925,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.348631135379878,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0.451199612907412,0,0,0,0.105551628892876,1.13733384070897,0.510281115829547,0.215915916102139,0,0.541892875087706,0,0.254876273045038,0,0,11.4015135855886,9.67311168792132,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.460511024178389,0.137836572484531,0.429680979473094,0.145016693914229,0.170453254832202,0,0,0.192190067365106,9.57095343709381,0.10115778085555,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0.855877976067841,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0.48763373908959,0.243713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| |||
|short_description=p@chr19:42011981..42012002,+ | |||
}} |
Revision as of 23:29, 20 January 2014
Short description: | p@chr19:42011981..42012002, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:42011981..42012002, + |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.06e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-40 | 42 |
defensive cell | 1.99e-40 | 48 |
phagocyte | 1.99e-40 | 48 |
granulocyte monocyte progenitor cell | 1.04e-34 | 67 |
myeloid lineage restricted progenitor cell | 1.28e-33 | 66 |
myeloid leukocyte | 3.63e-32 | 72 |
myeloid cell | 2.78e-31 | 108 |
common myeloid progenitor | 2.78e-31 | 108 |
macrophage dendritic cell progenitor | 6.71e-31 | 61 |
monopoietic cell | 5.66e-29 | 59 |
monocyte | 5.66e-29 | 59 |
monoblast | 5.66e-29 | 59 |
promonocyte | 5.66e-29 | 59 |
leukocyte | 1.65e-25 | 136 |
hematopoietic stem cell | 1.41e-24 | 168 |
hematopoietic oligopotent progenitor cell | 2.51e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.51e-24 | 161 |
hematopoietic lineage restricted progenitor cell | 5.42e-24 | 120 |
hematopoietic cell | 5.09e-22 | 177 |
nongranular leukocyte | 1.67e-17 | 115 |
stem cell | 1.61e-08 | 441 |
multi fate stem cell | 2.64e-08 | 427 |
mesenchymal cell | 4.21e-08 | 354 |
somatic stem cell | 8.48e-08 | 433 |
connective tissue cell | 1.77e-07 | 361 |
Langerhans cell | 2.02e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.05e-31 | 76 |
bone element | 2.53e-27 | 82 |
skeletal element | 5.42e-27 | 90 |
immune system | 3.45e-25 | 93 |
skeletal system | 2.14e-22 | 100 |
hematopoietic system | 8.52e-21 | 98 |
blood island | 8.52e-21 | 98 |
hemolymphoid system | 4.03e-19 | 108 |
musculoskeletal system | 8.89e-14 | 167 |
larynx | 5.56e-10 | 9 |
lateral plate mesoderm | 3.73e-08 | 203 |