FFCP PHASE1:Hg19::chr19:49469548..49469569,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C587 | |||
|description=CAGE_peak_at_chr19:49469548..49469569,+ | |||
|id=chr19:49469548..49469569,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.53e-23!65;CL:0002194!2.27e-23!63;CL:0000576!2.27e-23!63;CL:0000040!2.27e-23!63;CL:0000559!2.27e-23!63;CL:0002057!2.00e-22!42;CL:0000839!3.02e-21!70;CL:0000557!3.66e-21!71;CL:0000860!6.03e-21!45;CL:0000766!1.77e-19!76;CL:0000048!8.17e-17!430;CL:0000723!4.73e-16!436;CL:0000034!1.89e-15!444;CL:0002320!3.75e-14!365;CL:0000763!3.54e-13!112;CL:0000049!3.54e-13!112;CL:0000134!1.10e-12!358;CL:0002371!1.49e-10!591;CL:0000219!4.86e-09!390;CL:0000144!9.58e-09!625;CL:0000548!8.61e-07!679;CL:0000004!8.61e-07!679;CL:0000255!8.61e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.28e-20;39!CL:0000234;8.28e-20;39!CL:0000860;1.36e-19;33!CL:0002057;1.36e-19;33!CL:0000576;6.91e-16;48!CL:0000766;1.56e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.36e-27,48;CL:0000234,1.36e-27,48;CL:0002009,6.60e-26,61;CL:0002194,9.15e-26,59;CL:0000576,9.15e-26,59;CL:0000040,9.15e-26,59;CL:0000559,9.15e-26,59;CL:0000860,1.90e-23,42;CL:0002057,1.90e-23,42;CL:0000557,2.19e-23,67;CL:0000839,3.20e-23,66;CL:0000766,1.80e-21,72;CL:0000048,7.20e-18,427;CL:0000723,4.87e-17,433;CL:0000034,1.69e-16,441;CL:0002320,4.38e-15,361;CL:0000763,1.62e-14,108;CL:0000049,1.62e-14,108;CL:0000134,1.58e-13,354;CL:0000219,6.45e-10,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.48e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.21e-20!80;UBERON:0002405!6.49e-20!115;UBERON:0001474!4.26e-17!86;UBERON:0002204!1.45e-16!167;UBERON:0002390!3.04e-16!102;UBERON:0003061!3.04e-16!102;UBERON:0002193!3.26e-16!112;UBERON:0004765!3.80e-15!101;UBERON:0001434!3.80e-15!101;UBERON:0003081!2.13e-14!216;UBERON:0002384!3.79e-13!375;UBERON:0000926!2.62e-11!448;UBERON:0004120!2.62e-11!448;UBERON:0006603!2.62e-11!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.96e-22,76;UBERON:0001474,3.09e-19,82;UBERON:0002204,1.29e-18,167;UBERON:0004765,2.02e-18,90;UBERON:0002405,3.73e-18,93;UBERON:0001434,2.04e-17,100;UBERON:0002193,3.02e-17,108;UBERON:0002390,3.42e-17,98;UBERON:0003061,3.42e-17,98;UBERON:0000926,9.12e-17,315;UBERON:0004120,9.12e-17,315;UBERON:0006603,9.12e-17,315;UBERON:0003081,4.80e-15,203;UBERON:0002384,4.21e-14,371 | |||
|phase1_expression=10.1739892391512,25.263861819136,17.1964372997085,27.0197905553452,65.256319786384,20.9361245784089,30.3959853801973,6.31719873426831,7.31319758959548,0.491467873003018,6.28021051175185,0.436882744260345,1.84636884759917,3.7129905888014,17.5640609135795,25.5483555651675,16.8754467846714,10.9546513558106,10.7345215733912,0.984968464614303,5.71201935483908,4.07491137921514,0,1.50561867580173,0.251085279189606,0.305653622991805,0.57470412614962,0.708397031823113,0.786728553697808,0.383829398097213,7.1215416725395,3.67768489791571,2.71085326900425,4.43704812200145,0,0.142169232487422,0.293600439334847,2.21598163412751,3.00816671205213,2.82114131930607,48.5896579100636,53.4424548931316,44.0454220654459,27.044072412999,27.9628198329719,17.7086364667106,35.7940716834754,38.6497814740516,26.6347478969789,37.6877033942017,41.7541951642434,45.8775525983855,20.3399951634605,16.1371170895957,24.3767675869815,33.1306517594984,54.5812300115692,44.9446968890169,37.9544026539919,16.3673803808808,15.344091019177,26.0582527147506,36.5018493447586,15.7703157697097,20.6048559426295,30.6388021333215,20.553134216854,33.9185698096603,30.2460092683717,23.2392063834475,26.0321786132349,25.0428792471544,40.1907232049923,27.2519319342405,21.6856385964344,10.2732736299104,8.19999007369414,9.6113211418564,7.55410257476277,4.56020389985998,22.2786678462981,9.31587184199633,0,0,0.889509253863555,0.426730222566507,0.800791974072025,1.14950487990897,0,1.90810750907073,0,0.587237189370939,1.52909291250092,0,0,0.526768169550154,0.393419540227666,1.96505381374582,1.64481199199607,2.84217042164153,1.62961133316795,0.946895611469467,1.94826728407911,2.67385096524417,0.883817722424512,2.43687284041983,2.16643091012012,2.30564375506215,1.95089021339817,0.986627427622057,1.93445012450094,2.89803085735052,1.63115219478266,1.07016331235885,1.04535523804977,0.679856056185397,0.766440987203842,1.37450978193052,1.26509846009751,0.318565414324097,0.651083453856419,0,0.602300476311091,0.383959833463255,0,0.710331756132051,0.821127996921047,0,1.60464117470104,0.144824403882799,0,5.36560687762909,3.58015173161885,3.97583067623023,3.50936537445123,3.33146993609895,2.3858578411533,2.43317435151318,0.567208902984407,2.21729397462564,1.22968699970376,0.851363990735132,1.82147644146271,1.85392221392215,12.332800958878,13.2338600347443,31.511036642971,0.953962497221368,0.571994910780128,0.74291500265913,0.596287222100115,0.860234595106124,1.73570250803797,1.13061588384802,1.25849830862972,3.85165258716094,1.04497483268405,2.32575083252396,2.49036383880697,1.67360306382335,1.61131726843659,0.760272105718513,2.19655851793353,1.47065232138347,4.86085168729056,0.982297011124877,1.34717623575702,0.337834441449967,0,0.949265659568129,0.549605231791222,0,0,0,1.49091585508596,4.05217637326655,2.64818361626438,0.573673241497627,6.02936249737207,9.53151920241922,0,4.44001587150888,1.55605517699883,9.56445771694785,3.75962377160955,1.96764655938411,3.45705554687999,0.468642863667593,3.74592092196385,0.570471821544449,2.69007624993242,1.64408298101271,1.78060238804945,2.94946694074722,1.42907919878425,2.7023549808589,3.92637968467909,2.37600571456411,14.0942149688777,1.82032272387605,12.9351265526923,1.0100166837244,1.50142223846357,0,1.31693286264251,8.27517048657353,3.90618953157152,2.60894021268048,0.179389635688862,2.98980344345994,2.96704661623387,0,2.57631323096097,0.257640540045629,3.53622027030021,0.168776332241266,2.92311015483596,0,3.31379635112278,8.56724101139703,0.710019185033229,2.01504196455281,2.03472710772585,1.93260853163297,1.90922284413584,0.286804595389004,2.19552671033272,0.795178609928912,2.44007280025989,4.45742536566093,4.54177531576131,1.45990943630332,4.69348596989448,15.4377825166292,1.38134921352481,9.75172648867156,31.0408177117922,4.49565840151407,4.88895601226495,2.89213235860178,6.17646247301406,2.39667388501647,2.13543557199987,4.44943316928543,4.70931516300831,3.07797725557112,6.64339909162183,2.80483547606892,1.6462960453256,7.3504355692771,3.80265104465493,11.7939266001315,5.31710916013264,1.32438929824395,2.95172252503473,2.91665277507493,2.30475599358114,2.24803506515239,1.10581869652794,0.555530670951178,2.93227474779292,15.5990217791937,2.88662684050547,0.695582429850461,0,1.87676382089396,3.24089858803628,2.47330397904978,1.58040879591855,0,28.0687386939633,18.720341211139,47.8592342569705,0,0.839910640994298,0.992425680696705,0,0,0.383382679165211,0.492663237895943,2.81754988842323,1.65862492432618,1.44119953416961,5.17593977048158,0.507983154337352,1.14596527667483,1.17217447210047,1.71072446022705,3.18765227380303,3.00343057843917,2.28661146104463,1.00917975910825,5.66748089483264,1.3200891447771,3.10252117818667,17.8828222925941,2.535908257668,1.86156681609409,10.4007436911366,1.02882949704857,4.25547396069835,1.3321108950805,6.0050757336422,10.3098105024374,4.11620168390384,0.325736184293735,6.39705507736582,4.75171123760058,1.80863626235752,2.61460037580088,2.19940580600526,138.651109930957,123.555244492303,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| |||
|short_description=p@chr19:49469548..49469569,+ | |||
}} |
Revision as of 00:24, 21 January 2014
Short description: | p@chr19:49469548..49469569, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49469548..49469569, + |
Coexpression cluster: | C587_Osteoblast_Monocytederived_CD14_Macrophage_leiomyoma_Adipocyte_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.36e-27 | 48 |
phagocyte | 1.36e-27 | 48 |
macrophage dendritic cell progenitor | 6.60e-26 | 61 |
monopoietic cell | 9.15e-26 | 59 |
monocyte | 9.15e-26 | 59 |
monoblast | 9.15e-26 | 59 |
promonocyte | 9.15e-26 | 59 |
classical monocyte | 1.90e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.90e-23 | 42 |
granulocyte monocyte progenitor cell | 2.19e-23 | 67 |
myeloid lineage restricted progenitor cell | 3.20e-23 | 66 |
myeloid leukocyte | 1.80e-21 | 72 |
multi fate stem cell | 7.20e-18 | 427 |
somatic stem cell | 4.87e-17 | 433 |
stem cell | 1.69e-16 | 441 |
connective tissue cell | 4.38e-15 | 361 |
myeloid cell | 1.62e-14 | 108 |
common myeloid progenitor | 1.62e-14 | 108 |
mesenchymal cell | 1.58e-13 | 354 |
motile cell | 6.45e-10 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.96e-22 | 76 |
bone element | 3.09e-19 | 82 |
musculoskeletal system | 1.29e-18 | 167 |
skeletal element | 2.02e-18 | 90 |
immune system | 3.73e-18 | 93 |
skeletal system | 2.04e-17 | 100 |
hemolymphoid system | 3.02e-17 | 108 |
hematopoietic system | 3.42e-17 | 98 |
blood island | 3.42e-17 | 98 |
mesoderm | 9.12e-17 | 315 |
mesoderm-derived structure | 9.12e-17 | 315 |
presumptive mesoderm | 9.12e-17 | 315 |
lateral plate mesoderm | 4.80e-15 | 203 |
connective tissue | 4.21e-14 | 371 |