FFCP PHASE1:Hg19::chr19:54371114..54371180,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91663 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7544 | |||
|TSSclassifier=strong | |||
|UniProt=Q96S97,B4DG42,C9JC07,C9JZL8 | |||
|association_with_transcript=0bp_to_ENST00000391770,ENST00000391771,ENST00000415619,ENST00000439000,ENST00000448420,NM_001020819,NM_138373,uc002qcm.2,uc002qcn.2_5end | |||
|coexpression_cluster_id=C482 | |||
|description=CAGE_peak_1_at_MYADM_5end | |||
|id=chr19:54371114..54371180,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.57e-19!42;CL:0000860!2.45e-15!45;CL:0000048!1.13e-14!430;CL:0000144!1.22e-14!625;CL:0002371!2.31e-14!591;CL:0000723!9.46e-14!436;CL:0000766!2.07e-13!76;CL:0000034!4.72e-13!444;CL:0000192!7.11e-11!42;CL:0000514!7.11e-11!42;CL:0000183!8.62e-11!59;CL:0000557!1.77e-10!71;CL:0000359!2.73e-10!32;CL:0000222!2.79e-10!119;CL:0000055!4.86e-10!180;CL:0000187!8.10e-10!54;CL:0000057!2.06e-09!75;CL:0000680!2.39e-09!57;CL:0000056!2.39e-09!57;CL:0000355!2.39e-09!57;CL:0000839!1.29e-08!70;CL:0002009!1.69e-08!65;CL:0000134!6.27e-08!358;CL:0002320!6.99e-08!365;CL:0002194!8.00e-08!63;CL:0000576!8.00e-08!63;CL:0000040!8.00e-08!63;CL:0000559!8.00e-08!63;CL:0000012!1.05e-07!682;CL:0000548!1.63e-07!679;CL:0000004!1.63e-07!679;CL:0000255!1.63e-07!679;CL:0000393!3.41e-07!60;CL:0000211!3.41e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.10e-19;33!CL:0002057;2.10e-19;33!CL:0000473;4.10e-14;39!CL:0000234;4.10e-14;39!CL:0000359;1.12e-09;32!CL:0000766;6.92e-09;69!CL:0000576;1.62e-08;48!CL:0000192;3.44e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.56e-19,42;CL:0002057,5.56e-19,42;CL:0000473,7.38e-17,48;CL:0000234,7.38e-17,48;CL:0000048,1.08e-15,427;CL:0000766,3.12e-15,72;CL:0000723,9.84e-15,433;CL:0000034,5.27e-14,441;CL:0000557,4.49e-12,67;CL:0000192,6.94e-11,43;CL:0000514,6.94e-11,43;CL:0000222,1.74e-10,121;CL:0000359,2.73e-10,32;CL:0000839,5.22e-10,66;CL:0002009,5.97e-10,61;CL:0000187,7.38e-10,55;CL:0000057,8.05e-10,76;CL:0000680,2.14e-09,58;CL:0000056,2.14e-09,58;CL:0000355,2.14e-09,58;CL:0002194,3.22e-09,59;CL:0000576,3.22e-09,59;CL:0000040,3.22e-09,59;CL:0000559,3.22e-09,59;CL:0000134,1.33e-08,354;CL:0002320,1.50e-08,361;CL:0000393,2.99e-07,61;CL:0000211,2.99e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;3.31e-14;42!CL:0000514;3.44e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!8.43e-29!216;UBERON:0000926!2.37e-21!448;UBERON:0004120!2.37e-21!448;UBERON:0006603!2.37e-21!448;UBERON:0001009!6.98e-17!113;UBERON:0004535!8.76e-17!110;UBERON:0002204!9.67e-17!167;UBERON:0003914!1.46e-14!118;UBERON:0004872!1.98e-13!84;UBERON:0001981!3.50e-13!60;UBERON:0007500!3.50e-13!60;UBERON:0004537!3.50e-13!60;UBERON:0006965!3.50e-13!60;UBERON:0000055!1.45e-12!69;UBERON:0001637!1.53e-12!42;UBERON:0003509!1.53e-12!42;UBERON:0004572!1.53e-12!42;UBERON:0002049!2.13e-12!79;UBERON:0007798!2.13e-12!79;UBERON:0004573!1.16e-10!33;UBERON:0004571!1.16e-10!33;UBERON:0005256!1.90e-10!143;UBERON:0002193!8.31e-10!112;UBERON:0002390!1.00e-09!102;UBERON:0003061!1.00e-09!102;UBERON:0002371!1.62e-09!80;UBERON:0002385!2.20e-09!63;UBERON:0001015!2.20e-09!63;UBERON:0000383!2.20e-09!63;UBERON:0001134!2.91e-09!61;UBERON:0002036!2.91e-09!61;UBERON:0003082!2.91e-09!61;UBERON:0004290!3.80e-09!70;UBERON:0000914!1.38e-08!83;UBERON:0002329!1.38e-08!83;UBERON:0003077!1.38e-08!83;UBERON:0003059!1.38e-08!83;UBERON:0007282!1.38e-08!83;UBERON:0009618!1.38e-08!83;UBERON:0007285!1.38e-08!83;UBERON:0001474!1.38e-08!86;UBERON:0000486!2.44e-08!82;UBERON:0000467!3.85e-08!625;UBERON:0004765!5.74e-08!101;UBERON:0001434!5.74e-08!101;UBERON:0002384!6.04e-08!375;UBERON:0000480!6.98e-08!626;UBERON:0000468!1.10e-07!659;UBERON:0002100!4.58e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.03e-09;33!UBERON:0004571;1.03e-09;33!UBERON:0001637;3.37e-09;42!UBERON:0003509;3.37e-09;42!UBERON:0004572;3.37e-09;42!UBERON:0007500;4.72e-07;56!UBERON:0001981;4.72e-07;56!UBERON:0004537;4.72e-07;56!UBERON:0003914;6.82e-07;74 | |||
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|short_description=p1@MYADM | |||
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Revision as of 00:58, 21 January 2014
Short description: | p1@MYADM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYADM_5end |
Coexpression cluster: | C482_CD14_Mast_Fibroblast_Smooth_Neutrophils_Basophils_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000391770, ENST00000391771, ENST00000415619, ENST00000439000, ENST00000448420, NM_001020819, NM_138373, uc002qcm.2, uc002qcn.2_5end |
EntrezGene: | MYADM |
HGNC: | 7544 |
UniProt: | Q96S97B4DG42C9JC07C9JZL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.56e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.56e-19 | 42 |
defensive cell | 7.38e-17 | 48 |
phagocyte | 7.38e-17 | 48 |
multi fate stem cell | 1.08e-15 | 427 |
myeloid leukocyte | 3.12e-15 | 72 |
somatic stem cell | 9.84e-15 | 433 |
stem cell | 5.27e-14 | 441 |
granulocyte monocyte progenitor cell | 4.49e-12 | 67 |
smooth muscle cell | 6.94e-11 | 43 |
smooth muscle myoblast | 6.94e-11 | 43 |
mesodermal cell | 1.74e-10 | 121 |
vascular associated smooth muscle cell | 2.73e-10 | 32 |
myeloid lineage restricted progenitor cell | 5.22e-10 | 66 |
macrophage dendritic cell progenitor | 5.97e-10 | 61 |
muscle cell | 7.38e-10 | 55 |
fibroblast | 8.05e-10 | 76 |
muscle precursor cell | 2.14e-09 | 58 |
myoblast | 2.14e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.14e-09 | 58 |
monopoietic cell | 3.22e-09 | 59 |
monocyte | 3.22e-09 | 59 |
monoblast | 3.22e-09 | 59 |
promonocyte | 3.22e-09 | 59 |
mesenchymal cell | 1.33e-08 | 354 |
connective tissue cell | 1.50e-08 | 361 |
electrically responsive cell | 2.99e-07 | 61 |
electrically active cell | 2.99e-07 | 61 |