FFCP PHASE1:Hg19::chr19:54377502..54377530,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C482 | |||
|description=CAGE_peak_at_chr19:54377502..54377530,+ | |||
|id=chr19:54377502..54377530,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.70e-16!42;CL:0000048!1.64e-14!430;CL:0000860!5.60e-14!45;CL:0000723!2.27e-13!436;CL:0000144!3.73e-13!625;CL:0000034!2.82e-12!444;CL:0002371!1.14e-11!591;CL:0000766!4.71e-11!76;CL:0000134!1.08e-10!358;CL:0002320!1.29e-10!365;CL:0000557!3.55e-10!71;CL:0000548!6.38e-10!679;CL:0000004!6.38e-10!679;CL:0000255!6.38e-10!679;CL:0000012!1.93e-09!682;CL:0000839!3.81e-09!70;CL:0002009!4.64e-09!65;CL:0002194!1.29e-08!63;CL:0000576!1.29e-08!63;CL:0000040!1.29e-08!63;CL:0000559!1.29e-08!63;CL:0000057!3.97e-08!75;CL:0000219!1.00e-07!390;CL:0000003!9.09e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.98e-20;33!CL:0002057;2.98e-20;33!CL:0000473;2.72e-14;39!CL:0000234;2.72e-14;39!CL:0000576;1.36e-09;48!CL:0000766;1.83e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.98e-20,427;CL:0000723,2.84e-19,433;CL:0000860,4.05e-18,42;CL:0002057,4.05e-18,42;CL:0000034,7.14e-18,441;CL:0000473,1.08e-15,48;CL:0000234,1.08e-15,48;CL:0000134,1.19e-15,354;CL:0002320,3.04e-15,361;CL:0000766,1.64e-13,72;CL:0000557,2.85e-12,67;CL:0000839,2.95e-11,66;CL:0000219,6.09e-11,386;CL:0002009,9.21e-11,61;CL:0002194,3.01e-10,59;CL:0000576,3.01e-10,59;CL:0000040,3.01e-10,59;CL:0000559,3.01e-10,59;CL:0000057,2.56e-08,76;CL:0000763,3.73e-08,108;CL:0000049,3.73e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.51e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.10e-15!448;UBERON:0004120!4.10e-15!448;UBERON:0006603!4.10e-15!448;UBERON:0003081!7.94e-15!216;UBERON:0002204!7.50e-12!167;UBERON:0002384!1.04e-09!375;UBERON:0002371!1.95e-08!80;UBERON:0002390!3.88e-08!102;UBERON:0003061!3.88e-08!102;UBERON:0001474!1.26e-07!86;UBERON:0002193!1.29e-07!112;UBERON:0003914!2.35e-07!118;UBERON:0004765!7.02e-07!101;UBERON:0001434!7.02e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,4.89e-22,315;UBERON:0004120,4.89e-22,315;UBERON:0006603,4.89e-22,315;UBERON:0003081,5.49e-16,203;UBERON:0002384,2.47e-14,371;UBERON:0002204,1.91e-12,167;UBERON:0002371,5.98e-10,76;UBERON:0002390,2.61e-09,98;UBERON:0003061,2.61e-09,98;UBERON:0001474,6.30e-09,82;UBERON:0002193,4.31e-08,108;UBERON:0003914,1.15e-07,117;UBERON:0001434,1.98e-07,100;UBERON:0004765,2.87e-07,90 | |||
|phase1_expression=4.1786027232228,14.3447351006959,4.36958652697511,8.00586386825043,2.68176656656373,2.61701557230111,2.53299878168311,1.26343974685366,0.261185628199839,7.86348596804828,8.37361401566913,1.52908960491121,1.58260186937072,0.618831764800233,0,5.3786011716142,7.23233433628772,5.11217063271161,4.87932798790507,1.60057375499824,2.24400760368678,0.940364164434263,0.572471974262113,0.547497700291537,0.87879847716362,0,0,0,3.54027849164014,1.15148819429164,3.8704030829019,0.919421224478927,0.30120591877825,1.47901604066715,0.0774672005803016,0,0.293600439334847,1.10799081706375,2.60707781711184,3.03815219002193,0,0.32389366601898,0,24.5723023537464,14.3592858601748,8.49044214157357,22.5456165798514,8.63452564845834,15.7950249156503,15.5353891853961,5.63553554364021,6.62150243688039,9.3081333798887,5.16387746867061,5.41705946377367,25.9774428568794,9.27880910196676,4.71919317334678,35.5057315150247,10.9115869205872,17.9014395223732,8.90598510504134,8.7764009353518,8.09827026012119,32.2132254877728,9.07816359505824,14.3249117268982,10.3011952755265,12.5155900420848,5.86409880703815,24.2159801053348,8.83866326370155,5.69632297393592,1.90129757680748,1.91343869968539,0.209658645508376,1.90958672949042,3.45406853535464,2.73233497385036,0.855038231223746,0,0.365328307529268,0,0,0,0,0,0,0,0,2.27685187643779,2.34894875748376,0.764546456250458,0,0,1.31692042387539,1.37696839079683,2.35806457649499,1.85041349099558,0.167186495390678,0.32592226663359,0,0,1.22551502573691,0.589211814949674,0,0.270803863765016,0.512365278902701,0.390178042679635,0.822189523018381,1.10540007114339,0.869409257205157,1.18629250529648,0.267540828089713,0,0.453237370790265,0.766440987203842,0.34362744548263,1.26509846009751,0,0,0,0,0.127986611154418,1.24930726552346,0.710331756132051,0,1.81446068902259,1.87208137048455,1.59306844271079,0,1.34140171940727,2.04580098949649,5.06014813338393,0,3.18662341713812,0,0.486634870302636,0.567208902984407,2.88248216701333,2.19586964232815,0.589405839739707,1.09288586487763,0.370784442784429,0.324547393654683,0.348259474598534,0.531831842075461,0.476981248610684,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,2.09749718104953,4.67700671298115,0.835979866147242,0.775250277507987,1.42306505074684,0.33472061276467,2.81980521976403,2.28081631715554,5.6134273236079,0.735326160691737,6.48113558305408,0.535798369704479,0.673588117878509,0.112611480483322,0,0.949265659568129,1.09921046358244,0,0,1.3082821564276,2.98183171017191,4.17880688493113,2.78059279707759,5.16305917347865,6.73869926176878,0.560677600142307,4.2699598291882,4.68668341992604,0,1.48181739276657,1.30769522490767,0.756787138224657,0.576175924479999,0.468642863667593,0.936480230490962,0.570471821544449,2.54062756938062,0.704606991862589,0.485618833104395,0.280901613404497,1.02077085627447,0.737005903870608,1.54988671763648,2.37600571456411,4.45080472701402,2.73048408581408,8.62341770179486,0.673344455816265,1.00094815897571,0.554128230968366,1.75591048352335,3.0648779579902,2.10333282469236,2.04177929688038,4.66413052791041,2.77624605464138,5.08636562782948,4.80145753735044,2.67936576019941,1.8034837803194,3.53622027030021,9.11392194102838,3.80004320128675,2.27190396819703,3.12969655383818,2.90962902273861,8.87523981291536,3.02256294682921,2.88253006927829,0.386521706326594,0.545492241181669,0.573609190778008,0.243947412259191,0.662648841607426,0.929551542956147,0.310983165046111,1.00928340350251,1.45990943630332,0,5.14592750554308,1.38134921352481,3.71494342425583,0,0.473227200159376,0.842923450390509,0.723033089650446,1.21323370005633,1.30727666455444,0.71181185733329,1.75280700608214,0.98110732562673,1.15424147083917,2.95262181849859,5.60967095213783,4.115740113314,7.3504355692771,2.53510069643662,0.982827216677626,0,0,0.860919069801795,0.857839051492628,1.42675371031213,0,0.301586917234893,0.555530670951178,1.95484983186195,4.15973914111831,5.77325368101093,0.695582429850461,1.17408694235822,0.288732895522148,0.925971025153221,1.14152491340759,0,0.858486162094873,0.738651018262192,1.17002132569619,0.891786973732369,0,1.51183915378974,0.850650583454319,0,0.581267877027924,0.766765358330422,1.97065295158377,3.60998579454227,13.4763275101502,7.06187771743111,6.69084897159814,0.317489471460845,0.763976851116555,1.17217447210047,0,0.308482478109971,1.20137223137567,1.42913216315289,0.560655421726804,1.30788020649984,0.80672114403045,1.55126058909333,3.57656445851882,2.535908257668,5.58470044828228,10.4007436911366,0.514414748524284,2.83698264046557,1.3321108950805,2.14466990487221,1.62786481617433,0,0.977208552881205,2.48774364119782,0,2.71295439353627,5.22920075160176,5.89840647974137,2.43247561282381,0,2.10833939483032,2.15662369942424,4.59447743336456,0,1.88215698667853,1.02738161275192,0.537182889719687,0.112085143993527,1.18218456121156,3.01878604803324,1.02674429023799,0.254094624222463,0,0,0,0,20.2231896465739,47.865833472644,9.53155680902882,0.858840442033979,2.50085260529839,0.813795071099207,6.03115498439341,5.35286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| |||
|short_description=p@chr19:54377502..54377530,+ | |||
}} |
Revision as of 00:59, 21 January 2014
Short description: | p@chr19:54377502..54377530, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54377502..54377530, + |
Coexpression cluster: | C482_CD14_Mast_Fibroblast_Smooth_Neutrophils_Basophils_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.98e-20 | 427 |
somatic stem cell | 2.84e-19 | 433 |
classical monocyte | 4.05e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.05e-18 | 42 |
stem cell | 7.14e-18 | 441 |
defensive cell | 1.08e-15 | 48 |
phagocyte | 1.08e-15 | 48 |
mesenchymal cell | 1.19e-15 | 354 |
connective tissue cell | 3.04e-15 | 361 |
myeloid leukocyte | 1.64e-13 | 72 |
granulocyte monocyte progenitor cell | 2.85e-12 | 67 |
myeloid lineage restricted progenitor cell | 2.95e-11 | 66 |
motile cell | 6.09e-11 | 386 |
macrophage dendritic cell progenitor | 9.21e-11 | 61 |
monopoietic cell | 3.01e-10 | 59 |
monocyte | 3.01e-10 | 59 |
monoblast | 3.01e-10 | 59 |
promonocyte | 3.01e-10 | 59 |
fibroblast | 2.56e-08 | 76 |
myeloid cell | 3.73e-08 | 108 |
common myeloid progenitor | 3.73e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 4.89e-22 | 315 |
mesoderm-derived structure | 4.89e-22 | 315 |
presumptive mesoderm | 4.89e-22 | 315 |
lateral plate mesoderm | 5.49e-16 | 203 |
connective tissue | 2.47e-14 | 371 |
musculoskeletal system | 1.91e-12 | 167 |
bone marrow | 5.98e-10 | 76 |
hematopoietic system | 2.61e-09 | 98 |
blood island | 2.61e-09 | 98 |
bone element | 6.30e-09 | 82 |
hemolymphoid system | 4.31e-08 | 108 |
epithelial tube | 1.15e-07 | 117 |
skeletal system | 1.98e-07 | 100 |
skeletal element | 2.87e-07 | 90 |