FFCP PHASE1:Hg19::chr2:74776647..74776658,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84695 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13869 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=44bp_to_ENST00000481835_5end | |||
|description=CAGE_peak_9_at_LOXL3_5end | |||
|id=chr2:74776647..74776658,- | |||
|ontology_enrichment_celltype=CL:0000066!7.76e-12!254;CL:0002322!4.23e-10!5;CL:0000039!6.34e-09!7;CL:0000586!6.34e-09!7;CL:0002076!9.14e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000123;5.19e-30;2!CL:0000242;5.19e-30;2!CL:0000312;1.26e-12;5!CL:0000240;1.12e-10;6!CL:0000311;1.12e-10;6!CL:0000079;1.12e-10;6!CL:0000237;1.12e-10;6!CL:0000540;2.29e-10;6!CL:0000404;2.29e-10;6!CL:0002319;8.94e-09;25!CL:0002253;2.23e-08;2!CL:0000362;2.08e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.49e-30,2;CL:0000312,1.19e-12,5;CL:0000240,1.07e-10,6;CL:0000311,1.07e-10,6;CL:0000079,1.07e-10,6;CL:0000237,1.07e-10,6;CL:0000036,1.07e-10,6;CL:0000357,1.07e-10,6;CL:0000114,1.07e-10,6;CL:0000540,2.09e-10,6;CL:0000031,2.09e-10,6;CL:0000404,2.09e-10,6;CL:0002319,8.41e-09,25;CL:0002253,2.48e-08,2;CL:0000047,5.00e-08,8;CL:0000362,2.02e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.12e-10;6!CL:0000114;1.12e-10;6!CL:0000031;2.29e-10;6 | |||
|ontology_enrichment_disease=DOID:0050687!1.18e-27!143;DOID:305!9.09e-25!106;DOID:162!8.14e-17!235;DOID:14566!4.31e-16!239;DOID:1749!4.34e-13!14;DOID:3119!2.99e-09!14;DOID:3095!2.18e-07!22;DOID:2994!2.18e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:5409;3.07e-15;4!DOID:3119;1.12e-09;14!DOID:1325;4.12e-09;7!DOID:3904;4.12e-09;7!DOID:3905;2.81e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.67e-15,4;DOID:3119,1.17e-09,14;DOID:1325,4.57e-09,7;DOID:3904,4.57e-09,7;DOID:3905,3.04e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.00e-12!9;UBERON:0000344!2.33e-10!12;UBERON:0001557!1.95e-07!19;UBERON:0003343!4.18e-07!4;UBERON:0004785!4.18e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,1.19276791489337,0.580969714347592,0.310983165046111,0.756962552626885,1.09493207722749,0,0,0,0,0,0.354920400119532,0.674338760312407,0.241011029883482,0.110293972732394,0,0.71181185733329,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0,0,0,0,0,0.451199612907412,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0.296964680832639,0,0,0,0,0.16480387422676,0.844501632511974,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0.1137934482855,0.762760950878299,0,1.03423011972439,0,0,0,0,0,0.110579259931225,0,0,0,0.41827123283581,0,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,1.13082457147153,0.216388639742091,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.870592065804026,0,0,0,0,0,0,0.264768380074501,0,0.137041924646751,0,0.0633107959558787,0.391102765469606,0,0,0.19980960958213,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803765742325096,1.65047323916681,1.24632101408756,0.2249738915515,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,3.74667924645505,3.91286777249228,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0.511577485214607,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0.183428598521679,0.693153996902029,0,0,0,0,0,0,0.785720083444267,0,0.147856086217045,0,0,0,0,0,0,0,0.351742488719241,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632054446930906,1.97610423125813,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.223710863595585,0.490751168076215,0,0,0,0,0,3.04121302500737,1.98950775161368,0,1.1294608203896,0,2.11347980993343,0,0,0.470317296361523,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0.713921808193872,0.534434810531121,0.551369397209069,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0.488419611665847,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@LOXL3 | |||
}} |
Revision as of 04:02, 21 January 2014
Short description: | p9@LOXL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LOXL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000481835_5end |
EntrezGene: | LOXL3 |
HGNC: | 13869 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.49e-30 | 2 |
keratinocyte | 1.19e-12 | 5 |
stratified squamous epithelial cell | 1.07e-10 | 6 |
keratin accumulating cell | 1.07e-10 | 6 |
stratified epithelial cell | 1.07e-10 | 6 |
keratinizing barrier epithelial cell | 1.07e-10 | 6 |
epithelial fate stem cell | 1.07e-10 | 6 |
stratified epithelial stem cell | 1.07e-10 | 6 |
surface ectodermal cell | 1.07e-10 | 6 |
neuron | 2.09e-10 | 6 |
neuroblast | 2.09e-10 | 6 |
electrically signaling cell | 2.09e-10 | 6 |
neural cell | 8.41e-09 | 25 |
epithelial cell of large intestine | 2.48e-08 | 2 |
neuronal stem cell | 5.00e-08 | 8 |
epidermal cell | 2.02e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.67e-15 | 4 |
gastrointestinal system cancer | 1.17e-09 | 14 |
bronchus cancer | 4.57e-09 | 7 |
bronchogenic carcinoma | 4.57e-09 | 7 |
lung carcinoma | 3.04e-07 | 9 |