FFCP PHASE1:Hg19::chr2:107503530..107503556,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84620 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10861 | |||
|TSSclassifier=strong | |||
|UniProt=Q96JF0 | |||
|association_with_transcript=6bp_to_ENST00000361686,NM_001142352,NM_032528,uc002tdr.2,uc002tds.3_5end | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_3_at_ST6GAL2_5end | |||
|id=chr2:107503530..107503556,- | |||
|ontology_enrichment_celltype=CL:0000047!4.29e-09!8;CL:0000540!1.47e-07!6;CL:0000031!1.47e-07!6;CL:0000404!1.47e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.31e-12;6!CL:0000404;4.31e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.86e-13,8;CL:0000540,3.44e-12,6;CL:0000031,3.44e-12,6;CL:0000404,3.44e-12,6 | |||
|ontology_enrichment_development_v019=CL:0000031;4.31e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.35e-21!94;UBERON:0001016!4.35e-21!94;UBERON:0005743!1.02e-19!86;UBERON:0001017!1.48e-18!82;UBERON:0001893!2.96e-17!34;UBERON:0002791!2.19e-16!33;UBERON:0001869!3.21e-16!32;UBERON:0000956!5.83e-16!25;UBERON:0000203!5.83e-16!25;UBERON:0002346!7.95e-16!90;UBERON:0000924!9.09e-16!173;UBERON:0006601!9.09e-16!173;UBERON:0002020!2.02e-15!34;UBERON:0003528!2.02e-15!34;UBERON:0002616!9.02e-15!59;UBERON:0004121!1.44e-14!169;UBERON:0003075!1.82e-14!86;UBERON:0007284!1.82e-14!86;UBERON:0001950!3.86e-14!20;UBERON:0002619!5.84e-14!22;UBERON:0002780!9.14e-14!41;UBERON:0001890!9.14e-14!41;UBERON:0006240!9.14e-14!41;UBERON:0007023!1.27e-13!115;UBERON:0003056!1.42e-13!61;UBERON:0003080!3.22e-13!42;UBERON:0001049!6.28e-13!57;UBERON:0005068!6.28e-13!57;UBERON:0006241!6.28e-13!57;UBERON:0007135!6.28e-13!57;UBERON:0000955!1.56e-12!69;UBERON:0006238!1.56e-12!69;UBERON:0000153!1.39e-10!129;UBERON:0007811!1.39e-10!129;UBERON:0000033!6.62e-10!123;UBERON:0000922!3.36e-08!612;UBERON:0000064!5.22e-07!219;UBERON:0000468!6.02e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.64e-14;20!UBERON:0002619;4.93e-13;22!UBERON:0000956;3.01e-11;25!UBERON:0000203;3.01e-11;25!UBERON:0001869;3.04e-09;32!UBERON:0001893;3.09e-08;34!UBERON:0002791;1.22e-07;32!UBERON:0000341;5.76e-07;2!UBERON:0003528;6.28e-07;34!UBERON:0002020;6.28e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.20e-14,20;UBERON:0002619,8.99e-13,22;UBERON:0000956,5.07e-11,25;UBERON:0000203,5.07e-11,25;UBERON:0001869,8.48e-10,32;UBERON:0001893,4.34e-09,34;UBERON:0001016,1.52e-08,89;UBERON:0002791,3.45e-08,32;UBERON:0001017,8.22e-08,81;UBERON:0003528,1.36e-07,34;UBERON:0002020,1.36e-07,34;UBERON:0002780,3.77e-07,41;UBERON:0001890,3.77e-07,41;UBERON:0003080,3.77e-07,41;UBERON:0006240,3.77e-07,41;UBERON:0000341,6.51e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,1.39560233594486,0,0,0,0,0,0,0,0,0.61560529038394,0,0,0.572471974262113,0.547497700291537,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,2.91980922181582,0.0945348171640679,0.221729397462564,0.351339142772504,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,1.06748995729705,0.98667019366864,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,1.09776335516636,1.85541675650079,0.464775771478074,0.725627385107593,0.252320850875628,1.09493207722749,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,1.15930404975077,1.87853910777315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,1.12131084345361,0,0.4400297149257,1.16344544182,0,0,0.26593811658487,0,0,0,0,0,0,3.29296134712308,0,0,2.37585561880029,0.301439377059586,0,0.799783929456456,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.254094624222463,5.20559415430487,2.31986643833309,6.1981018173709,2.55175500661265,0,0,0,0.613457458595699,0,0,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0,0.195801157462741,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.462092022626489,0.784349769176855,1.46139224653261,0.316654886678627,0,0,0.647747748306418,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,0.656029291399411,0,0,0.366277859273374,0.247528499761764,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949138274156178,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69017361519345,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81974010175699,0,0,0,0,0,0,0,0,0,1.1253553312841,0,0,0,7.96991953004279,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.834912883456661,5.98841394003583,0,0,0,0,0,0,0.344743373241465,0,0,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0,0,0.615602068030377,0,0,0,0,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.404406797884062,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,8.57003732565372,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.872901148395775,0,0.225980740780532,1.91858694505451,0,1.13959432720582,0,0,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.273810757783986,0,0,0,0,2.7499250881402,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.817220436669454,1.60753148465019,1.37539436597234,0.83088067605837,0,0,1.03274246318642,0,0,0.367182116944987,0,0,0,2.1440859791201,0,0,0,0,0.326587360109409,1.19730191562487,0,0,0,0.293104467356165,1.32506888912221,0.129282956361551,0,3.07956308191793,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0.628216385000937,0.886068179966986,0.610131324509816,0.250381861413,0,0.221858103073705,0.372578417648301,0,0,0,0,0.705797459094515,0.936669811613763,5.50699908721136,0,0,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0.159296767163702,0,0.621051827505038,0.829412415681711,0.53168342911599,0,0,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,1.71553273099941,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0.256241518587947,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,4.73209173823511,0.431299245586727,0.157265941855896,2.18419276384028,0,1.70059936081346,0.743614585554013,0,0.318004350653419,0,2.40171224485641,0,0,0.834979926253974,0,0.478901577171454,2.46139637088906,6.30179240554295,2.97376185596137,1.29180516505481,0,0,0,0,0,0,6.90359926060101,0,0.150420656698515,0.40341013740704,0,0,0,0,1.41828927698629,1.56215619722769,1.03343398250592,0.887821342714695,5.4697480901822,0,0,0.351742488719241,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.339848664884159,0.920818829879887,0,0.778619813244484,0.156986185701028,0,0,1.82631744101899,2.37520350340484,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,1.8328549483524,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,3.27543637912984,0,2.2644426535001,0.0771741581079447,0.218559560503957,2.82190377816914,0.245148321753905,0,0,0,0.8453114551668,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,2.24371917630019,7.85431242612679,0.5290268405154,0,0,0,0,0.109265571963696,0,0,1.3360870263278,0,0,1.13668047327359,2.14371304124943,0,0,1.27940389140589,14.5219303192882,0,0.124149428591716,0,3.94612381324622,47.4975394051815,1.08858373948481,0.342233301085281,0.134704106029175,0.286888821570705,0.332660356546013,0,0,0,0,0,0.244482888365733,1.62758471326295,0,0.201273793591026,0 | |||
|short_description=p3@ST6GAL2 | |||
}} |
Revision as of 04:49, 21 January 2014
Short description: | p3@ST6GAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ST6GAL2_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | 6bp_to_ENST00000361686, NM_001142352, NM_032528, uc002tdr.2, uc002tds.3_5end |
EntrezGene: | ST6GAL2 |
HGNC: | 10861 |
UniProt: | Q96JF0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.86e-13 | 8 |
neuron | 3.44e-12 | 6 |
neuroblast | 3.44e-12 | 6 |
electrically signaling cell | 3.44e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
neocortex | 3.20e-14 | 20 |
regional part of cerebral cortex | 8.99e-13 | 22 |
cerebral cortex | 5.07e-11 | 25 |
pallium | 5.07e-11 | 25 |
cerebral hemisphere | 8.48e-10 | 32 |
telencephalon | 4.34e-09 | 34 |
nervous system | 1.52e-08 | 89 |
regional part of telencephalon | 3.45e-08 | 32 |
central nervous system | 8.22e-08 | 81 |
brain grey matter | 1.36e-07 | 34 |
gray matter | 1.36e-07 | 34 |
regional part of forebrain | 3.77e-07 | 41 |
forebrain | 3.77e-07 | 41 |
anterior neural tube | 3.77e-07 | 41 |
future forebrain | 3.77e-07 | 41 |
throat | 6.51e-07 | 2 |