FFCP PHASE1:Hg19::chr2:163100045..163100071,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2191 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3590 | |||
|TSSclassifier=weak | |||
|UniProt=Q12884 | |||
|association_with_transcript=0bp_to_ENST00000188790,NM_004460,uc002ucd.2,uc010fpd.2,uc010fpe.1,uc010zct.1_5end | |||
|coexpression_cluster_id=C4137 | |||
|description=CAGE_peak_2_at_FAP_5end | |||
|id=chr2:163100045..163100071,- | |||
|ontology_enrichment_celltype=CL:0000055!8.33e-27!180;CL:0000680!2.81e-19!57;CL:0000056!2.81e-19!57;CL:0000355!2.81e-19!57;CL:0000187!2.36e-17!54;CL:0000192!1.33e-15!42;CL:0000514!1.33e-15!42;CL:0000183!5.11e-15!59;CL:0000393!7.74e-14!60;CL:0000211!7.74e-14!60;CL:0000359!4.10e-13!32;CL:0000057!2.81e-11!75;CL:0000222!7.73e-10!119;CL:0002371!1.68e-09!591;CL:0000144!4.44e-09!625;CL:0002334!6.00e-08!12;CL:0000220!7.20e-08!246;CL:0002321!1.42e-07!248;CL:0002494!3.81e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.20e-12;32!CL:0000134;1.11e-10;55!CL:0000192;3.13e-10;43!CL:0000048;1.99e-09;58!CL:0002494;4.28e-09;16!CL:0000723;4.67e-09;61!CL:0002334;1.45e-08;12!CL:0002539;8.09e-07;10!CL:0000187;9.13e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.59e-16,58;CL:0000056,4.59e-16,58;CL:0000355,4.59e-16,58;CL:0000192,1.35e-14,43;CL:0000514,1.35e-14,43;CL:0000187,9.79e-14,55;CL:0000359,6.39e-13,32;CL:0000048,1.34e-12,427;CL:0000723,2.09e-12,433;CL:0000034,1.44e-11,441;CL:0000393,2.12e-11,61;CL:0000211,2.12e-11,61;CL:0000057,2.78e-09,76;CL:0002494,4.05e-09,16;CL:0002334,1.56e-08,12;CL:0002539,6.43e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.13e-10;43!CL:0000355;6.92e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!9.04e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.48e-15;14!DOID:120;3.67e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.45e-15,14;DOID:120,3.66e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.04e-18!83;UBERON:0002329!7.04e-18!83;UBERON:0003077!7.04e-18!83;UBERON:0003059!7.04e-18!83;UBERON:0007282!7.04e-18!83;UBERON:0009618!7.04e-18!83;UBERON:0007285!7.04e-18!83;UBERON:0001134!1.01e-16!61;UBERON:0002036!1.01e-16!61;UBERON:0003082!1.01e-16!61;UBERON:0000486!7.85e-16!82;UBERON:0004290!1.07e-15!70;UBERON:0002385!1.39e-15!63;UBERON:0001015!1.39e-15!63;UBERON:0000383!1.39e-15!63;UBERON:0005256!7.00e-12!143;UBERON:0004872!1.78e-10!84;UBERON:0001637!5.04e-09!42;UBERON:0003509!5.04e-09!42;UBERON:0004572!5.04e-09!42;UBERON:0001009!7.02e-08!113;UBERON:0004535!1.56e-07!110;UBERON:0002049!1.77e-07!79;UBERON:0007798!1.77e-07!79;UBERON:0004573!1.88e-07!33;UBERON:0004571!1.88e-07!33;UBERON:0000490!2.44e-07!138;UBERON:0003102!3.35e-07!95;UBERON:0002100!4.09e-07!216;UBERON:0007100!7.20e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001135;4.68e-08;15!UBERON:0002118;1.37e-07;5!UBERON:0000992;1.46e-07;13!UBERON:0004573;1.83e-07;33!UBERON:0004571;1.83e-07;33!UBERON:0004237;8.09e-07;10!UBERON:0004695;8.09e-07;10!UBERON:0002111;8.09e-07;10!UBERON:0004178;8.09e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.73e-14,62;UBERON:0002036,2.73e-14,62;UBERON:0003082,2.73e-14,62;UBERON:0002385,1.70e-13,64;UBERON:0001015,1.70e-13,64;UBERON:0000383,1.70e-13,64;UBERON:0002329,1.32e-12,71;UBERON:0003059,1.32e-12,71;UBERON:0007282,1.32e-12,71;UBERON:0004290,1.32e-12,71;UBERON:0009618,1.32e-12,71;UBERON:0000486,1.44e-12,83;UBERON:0003077,2.83e-12,72;UBERON:0007285,2.83e-12,72;UBERON:0007524,5.94e-12,73;UBERON:0004872,1.56e-10,83;UBERON:0007503,1.75e-10,78;UBERON:0005256,3.70e-09,122;UBERON:0001637,1.74e-08,42;UBERON:0003509,1.74e-08,42;UBERON:0004572,1.74e-08,42;UBERON:0001135,3.74e-08,15;UBERON:0004573,5.10e-08,33;UBERON:0004571,5.10e-08,33;UBERON:0000926,5.37e-08,315;UBERON:0004120,5.37e-08,315;UBERON:0006603,5.37e-08,315;UBERON:0000948,8.31e-08,24;UBERON:0005498,8.31e-08,24;UBERON:0004140,8.31e-08,24;UBERON:0009881,8.31e-08,24;UBERON:0004141,8.31e-08,24;UBERON:0003084,8.31e-08,24;UBERON:0007005,8.31e-08,24;UBERON:0004139,8.31e-08,24;UBERON:0004291,8.31e-08,24;UBERON:0004535,1.17e-07,109;UBERON:0002118,1.41e-07,5;UBERON:0000992,1.45e-07,13;UBERON:0001009,3.63e-07,112;UBERON:0004237,6.43e-07,10;UBERON:0004695,6.43e-07,10;UBERON:0002111,6.43e-07,10;UBERON:0004178,6.43e-07,10;UBERON:0003104,6.44e-07,160;UBERON:0009142,6.44e-07,160 | |||
|phase1_expression=5.08699461957559,2.5692062866918,8.3163098416623,0,4.02264984984559,0.872338524100369,5.06599756336621,1.26343974685366,0,0,0,2.18441372130172,3.16520373874144,1.8564952944007,0.994192127183747,5.3786011716142,10.8485015044316,7.30310090387373,6.34312638427659,0,0,0,0.572471974262113,0,0.87879847716362,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.2786256184353,0,1.50401373190767,1.59331170856906,30.2208659879418,6.8128881842369,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835979866147242,1.55050055501597,2.84613010149368,1.67360306382335,0,0,0,0,0.81014194788176,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,15.9031024542502,6.83804762988731,37.8690257125806,10.8997915884549,2.83734705758686,3.92474320099615,2.1349799145941,7.4000264525148,2.8008993185979,1.61652806483626,0.980771418680752,0.454072282934794,0.576175924479999,0,0.624320153660641,0,0.448346041655403,0,0,0.140450806702248,0.816616685019573,0,0.103325781175765,0,1.48360157567134,0,0,0.336672227908132,0,0,1.31693286264251,1.22595118319608,1.80285670687916,5.44474479168101,2.15267562826634,1.70845911054854,0.635795703478686,1.50045548042201,1.64884046781502,2.57640540045629,1.67505170698431,2.36286865137773,0.779496041289589,2.27190396819703,2.11714766877288,0.969876340912871,3.19508633264953,1.10827308050404,0.847802961552438,3.47869535693934,29.4565810238101,0.286804595389004,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,1.85747171212792,0,0.591534000199219,0.168584690078102,0,0.882351781859152,0.217879444092406,0.474541238222193,0.269662616320329,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,3.77449182656756,1.97550513735526,0,0,0.462942225792648,0,0,0,0,20.3117041027971,0,0,0,0,0,0,0,0,0.93733833986777,5.20744597416465,13.7521844325115,4.65704318054811,0.871901815541886,0.766765358330422,0,0,0,0,0,1.77794104018073,1.90994212779139,1.17217447210047,0,0.205654985406647,2.40274446275134,0,0.112131084345361,0,2.3468251462704,74.7190517079955,0,1.690605505112,9.30783408047047,2.08014873822732,0,0,0,1.42977993658148,0.542621605391443,0.823240336780769,2.28015329005615,2.13235169245527,1.58390374586686,28.9381801977203,60.1358086434203,1.09970290300263,0,0,0,5.75099653179798,1.14861935834114,0,9.41078493339265,3.90405012845728,9.66929201495436,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,1.00034104211935,0.542530047399471,5.40724239980099,4.81758269752337,4.25796520591624,1.87426263988341,0.902838299183157,4.5481500811197,1.03473071292505,1.99267679560631,0.184369168541703,1.12948698808508,0,0,0,0,0,0,3.32870879020994,0,11.6610669674825,12.4304198363331,4.77122160536225,22.4243511197477,4.60536524160033,13.8334372183502,2.96836132889982,0.616838775210622,0.532685175939381,1.47828880824856,5.71179872101983,1.04589340613963,0,28.6724252533697,1.47329582297434,2.98517565227978,2.1850940160806,2.75361271414791,0,0.231046011313244,0,0,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.721287081534056,0,0,10.3367796839311,1.95018073810956,12.8547143875328,1.06337790121334,0.924291702687866,0.460511024178389,0.689182862422653,2.0409846524972,0.870100163485371,0.852266274161009,1.78064071293475,3.47098322258054,0.192190067365106,1.14851441245126,0.10115778085555,2.32422774648643,32.1108593767253,2.7881490806424,1.84820148105653,0.532306030317022,0,6.4863476686372,2.86249773483982,2.60510858551767,8.22586504268687,5.3376454298671,0,0.42793898803392,0.95460974377781,2.35484592059769,9.35336779433237,8.78518495155375,5.53718291024726,1.61745985258653,0,4.21258456238981,0.975267478179181,0.974853958525138,0,2.59349831675173,5.37340641424108,1.13008116620243,0.551365343546124,1.32687795048244,1.31535265576129,0,0.655894752046633,4.8698490471049,0.92947049429925,0.563391205064483,3.01163839628508,6.87743287091848,3.5667105148125,1.41904425628239,0.422215270595328,0.329294892959902,0,0.699869440489966,0.288666338176536,0.670302275535787,0,0.564862804660675,2.15252686335615,0,0,5.97280840538095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0,0,0,0,0.667852230137435,0,0,0,0,0,0,0,11.1974251558251,0,0,0,0.197286811273867,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,1.16641845353302,0,0,0,0,0,0,0,0,0,0.384751292518985,4.32979812218605,0,0,0,0.638002319463839,2.47313502185028,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,10.1859271699071,0.34945333648406,0.171986032471617,0,0,0,0.0969890164884194,0,0.451961481561065,0,0.596143835108969,0,0,0,0,0.39961921916426,0,0.343609788497747,0,0,0,0,0,0,0.101998217636322,2.02265412931063,0,0,0,0,0.262887354279314,0.279282401272254,0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| |||
|short_description=p2@FAP | |||
}} |
Revision as of 06:20, 21 January 2014
Short description: | p2@FAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAP_5end |
Coexpression cluster: | C4137_Smooth_Fibroblast_Chondrocyte_Mesenchymal_Preadipocyte_mesenchymal_Ewing |
Association with transcript: | 0bp_to_ENST00000188790, NM_004460, uc002ucd.2, uc010fpd.2, uc010fpe.1, uc010zct.1_5end |
EntrezGene: | FAP |
HGNC: | 3590 |
UniProt: | Q12884 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.59e-16 | 58 |
myoblast | 4.59e-16 | 58 |
multi-potent skeletal muscle stem cell | 4.59e-16 | 58 |
smooth muscle cell | 1.35e-14 | 43 |
smooth muscle myoblast | 1.35e-14 | 43 |
muscle cell | 9.79e-14 | 55 |
vascular associated smooth muscle cell | 6.39e-13 | 32 |
multi fate stem cell | 1.34e-12 | 427 |
somatic stem cell | 2.09e-12 | 433 |
stem cell | 1.44e-11 | 441 |
electrically responsive cell | 2.12e-11 | 61 |
electrically active cell | 2.12e-11 | 61 |
fibroblast | 2.78e-09 | 76 |
cardiocyte | 4.05e-09 | 16 |
preadipocyte | 1.56e-08 | 12 |
aortic smooth muscle cell | 6.43e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.45e-15 | 14 |
female reproductive organ cancer | 3.66e-07 | 27 |