FFCP PHASE1:Hg19::chr2:211476909..211476924,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=1373 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2323 | |||
|TSSclassifier=strong | |||
|UniProt=P31327 | |||
|association_with_transcript=70bp_to_BX640601_5end | |||
|coexpression_cluster_id=C768 | |||
|description=CAGE_peak_7_at_CPS1_5end | |||
|id=chr2:211476909..211476924,+ | |||
|ontology_enrichment_celltype=CL:0002150!1.44e-11!3;CL:0000861!1.44e-11!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.29e-35;29 | |||
|ontology_enrichment_disease=DOID:305!1.50e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.89e-12,106;DOID:0050687,9.17e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.14e-33!9;UBERON:0001557!1.47e-14!19;UBERON:0008947!1.43e-09!38;UBERON:0003258!1.43e-09!38;UBERON:0000072!1.69e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.11e-93;9!UBERON:0001557;3.11e-93;9!UBERON:0000072;1.20e-24;37!UBERON:0000065;2.47e-20;44!UBERON:0001004;3.72e-09;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.96e-93,9;UBERON:0001557,1.06e-43,19;UBERON:0008947,2.87e-26,38;UBERON:0003258,2.87e-26,38;UBERON:0000072,5.44e-21,47;UBERON:0001041,1.23e-18,87;UBERON:0000065,4.24e-18,54;UBERON:0004921,2.42e-15,118;UBERON:0001004,7.68e-13,74;UBERON:0001007,4.07e-12,145;UBERON:0001555,4.07e-12,145;UBERON:0007026,4.07e-12,145;UBERON:0004119,8.65e-11,160;UBERON:0000925,8.65e-11,160;UBERON:0006595,8.65e-11,160;UBERON:0001048,3.05e-09,160;UBERON:0011216,5.09e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,3.43089720115547,2.02301628093722,2.89213235860178,3.30881918197182,2.61455332910887,2.60997681022206,3.23595139584395,2.15843611637881,1.92373578473195,0,0,0,0,3.80265104465493,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,2.91845782408015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,1.30726156222788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483781656445426,1.60796497589608,1.14961639874493,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43429871466276,0,0,0,0,0,0,0,0,0.082092520749339,0,0,3.07759690723973,5.30027555648885,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,1.96703604453562,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0.371995018166751,0,0,0.126166424835079,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p7@CPS1 | |||
}} |
Revision as of 08:15, 21 January 2014
Short description: | p7@CPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_7_at_CPS1_5end |
Coexpression cluster: | C768_Hepatocyte_liver_cervical_Hep2_epitheloid_large_nonsmall |
Association with transcript: | 70bp_to_BX640601_5end |
EntrezGene: | CPS1 |
HGNC: | 2323 |
UniProt: | P31327 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 2.96e-93 | 9 |
upper respiratory tract | 1.06e-43 | 19 |
respiratory primordium | 2.87e-26 | 38 |
endoderm of foregut | 2.87e-26 | 38 |
segment of respiratory tract | 5.44e-21 | 47 |
foregut | 1.23e-18 | 87 |
respiratory tract | 4.24e-18 | 54 |
subdivision of digestive tract | 2.42e-15 | 118 |
respiratory system | 7.68e-13 | 74 |
digestive system | 4.07e-12 | 145 |
digestive tract | 4.07e-12 | 145 |
primitive gut | 4.07e-12 | 145 |
endoderm-derived structure | 8.65e-11 | 160 |
endoderm | 8.65e-11 | 160 |
presumptive endoderm | 8.65e-11 | 160 |
primordium | 3.05e-09 | 160 |
organ system subdivision | 5.09e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.89e-12 | 106 |
cell type cancer | 9.17e-09 | 143 |