FFCP PHASE1:Hg19::chr2:231090433..231090469,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11262 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17133 | |||
|TSSclassifier=strong | |||
|UniProt=E9PFJ6,F8W6B8,E7EX75,Q13342,E7ESH9,E7EUR5,F5GY84,F5H4B7,B4DVW8,Q6NSG4,Q3KR17,Q8IWJ1 | |||
|association_with_transcript=0bp_to_ENST00000343805,ENST00000350136,ENST00000392044,ENST00000392045,ENST00000417495,ENST00000420434,ENST00000486687,ENST00000537563,ENST00000543928,NM_001005176,NM_007237,uc002vqj.2,uc002vqk.2,uc002vql.2,uc002vqm.2,uc002vqn.2,uc010fxl.2,uc010zma.1_5end | |||
|coexpression_cluster_id=C1325 | |||
|description=CAGE_peak_1_at_SP140_5end | |||
|id=chr2:231090433..231090469,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.86e-69!140;CL:0002087!1.56e-61!119;CL:0002031!5.24e-55!124;CL:0000037!6.57e-51!172;CL:0000566!6.57e-51!172;CL:0000988!3.12e-49!182;CL:0002032!6.78e-49!165;CL:0000837!6.78e-49!165;CL:0000542!9.37e-37!53;CL:0000051!9.37e-37!53;CL:0000838!8.23e-36!52;CL:0000766!4.77e-26!76;CL:0002057!7.17e-25!42;CL:0002009!1.09e-22!65;CL:0000860!4.21e-22!45;CL:0002194!4.73e-22!63;CL:0000576!4.73e-22!63;CL:0000040!4.73e-22!63;CL:0000559!4.73e-22!63;CL:0000557!1.34e-20!71;CL:0000945!9.05e-20!24;CL:0000826!9.05e-20!24;CL:0000839!2.09e-19!70;CL:0000763!1.48e-16!112;CL:0000049!1.48e-16!112;CL:0000791!5.11e-16!18;CL:0000789!5.11e-16!18;CL:0002420!5.11e-16!18;CL:0002419!5.11e-16!18;CL:0000790!5.11e-16!18;CL:0000084!6.23e-15!25;CL:0000827!6.23e-15!25;CL:0000236!2.76e-12!14;CL:0000625!2.19e-10!11;CL:0000094!1.45e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.02e-24;53!CL:0000945;3.36e-24;24!CL:0002087;4.58e-23;104!CL:0000860;1.08e-21;33!CL:0002057;1.08e-21;33!CL:0000473;5.80e-20;39!CL:0000234;5.80e-20;39!CL:0000791;2.20e-19;18!CL:0000789;2.20e-19;18!CL:0002419;2.20e-19;18!CL:0000576;5.68e-19;48!CL:0000084;2.56e-17;25!CL:0000738;9.19e-17;136!CL:0000766;1.88e-14;69!CL:0000236;7.49e-14;13!CL:0000625;1.95e-12;11!CL:0000988;7.30e-11;177!CL:0000094;5.86e-09;8!CL:0000624;9.46e-08;6!CL:0000081;1.17e-07;11!CL:0000219;2.62e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.54e-86,136;CL:0002087,1.42e-80,115;CL:0002031,3.39e-69,120;CL:0000037,6.41e-65,168;CL:0000988,4.14e-64,177;CL:0002032,3.40e-62,161;CL:0000837,3.40e-62,161;CL:0000542,2.34e-44,53;CL:0000051,2.34e-44,53;CL:0000838,3.42e-43,52;CL:0000766,2.14e-34,72;CL:0000473,6.19e-32,48;CL:0000234,6.19e-32,48;CL:0002194,4.10e-31,59;CL:0000576,4.10e-31,59;CL:0000040,4.10e-31,59;CL:0000559,4.10e-31,59;CL:0002009,8.93e-31,61;CL:0000860,2.52e-30,42;CL:0002057,2.52e-30,42;CL:0000557,1.84e-26,67;CL:0000839,5.37e-26,66;CL:0000945,3.34e-24,24;CL:0000826,3.34e-24,24;CL:0000763,1.17e-21,108;CL:0000049,1.17e-21,108;CL:0000791,2.17e-19,18;CL:0000789,2.17e-19,18;CL:0002420,2.17e-19,18;CL:0002419,2.17e-19,18;CL:0000790,2.17e-19,18;CL:0000084,2.54e-17,25;CL:0000827,2.54e-17,25;CL:0000236,5.80e-15,14;CL:0000134,1.28e-12,354;CL:0000625,1.92e-12,11;CL:0002320,9.36e-12,361;CL:0000094,5.74e-09,8;CL:0000219,8.09e-09,386;CL:0002393,7.15e-08,9;CL:0002397,7.15e-08,9;CL:0000624,9.70e-08,6;CL:0000081,1.14e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.02e-24;53!CL:0002057;6.80e-22;42!CL:0000790;2.20e-19;18!CL:0000049;3.95e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.46e-30!102;UBERON:0003061!1.46e-30!102;UBERON:0002193!1.78e-27!112;UBERON:0007023!9.78e-21!115;UBERON:0002371!5.05e-17!80;UBERON:0002405!1.40e-15!115;UBERON:0001474!1.62e-14!86;UBERON:0000178!3.84e-12!15;UBERON:0000179!3.84e-12!15;UBERON:0000463!3.84e-12!15;UBERON:0004765!3.26e-10!101;UBERON:0001434!3.26e-10!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.30e-14;15!UBERON:0000179;1.30e-14;15!UBERON:0000463;1.30e-14;15!UBERON:0002390;3.08e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.86e-40,98;UBERON:0003061,9.86e-40,98;UBERON:0002193,1.97e-36,108;UBERON:0002405,1.02e-24,93;UBERON:0002371,1.94e-22,76;UBERON:0001474,1.44e-19,82;UBERON:0004765,2.21e-16,90;UBERON:0000178,1.31e-14,15;UBERON:0000179,1.31e-14,15;UBERON:0000463,1.31e-14,15;UBERON:0001434,3.44e-13,100;UBERON:0002384,5.74e-11,371;UBERON:0003081,2.11e-09,203;UBERON:0004177,5.38e-07,7;UBERON:0005057,5.38e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.0145568409533,59.3587261723108,69.1080659934104,10.6208354749204,32.6254988382631,10.9919447554414,0,0,0,18.6695953398527,15.6386155736164,0,12.1878989877013,14.6397446653203,13.0206522429511,6.04571780447796,13.6035339727971,6.43938919085466,7.26991193897824,6.42389104270976,6.0646015296954,9.0647324393217,5.34518254428373,8.05236564327269,18.4123131086176,16.1381245113333,17.4996850117553,9.65287906062532,8.39130088658974,10.8341189275473,8.094420600332,4.09359225086769,6.29225756446237,23.2623758201886,13.799948164272,14.0654167675789,21.1104832119498,18.5501201588118,14.0654167675789,23.7971575675439,9.64554881974938,8.71951148593805,15.3261685806613,16.6874533894464,19.9813737128707,29.6645756290351,16.5724936194404,28.7980772571205,13.9428488965882,12.3310493979725,11.1119082119439,6.73971786878971,9.01061357049038,11.0900654820985,18.8108410869224,17.5046675935199,18.0837512226988,79.1983100075952,109.227722252426,104.072582702036,95.1608396323311,118.116816175624,98.8574196721711,117.665987355705,124.026988089597,80.2590286444322,79.2770205650767,89.0696621531783,1.32171328579026,14.5732226375199,0,47.0136350572061,45.5892484789031,45.8491342768906,47.3137781955619,35.1996047964278,41.6634069046565,23.3792074089494,84.4491263189616,44.1908861212256,45.635982284226,61.4724770746585,50.852253931093,43.1797033898796,41.7672277693337,27.358651760799,55.9319955468651,43.4479630064837,50.5652165089558,36.5874333317419,74.5575474949985,54.4173100914728,52.918626604325,70.5924940734413,37.9092843045675,32.5541726928209,41.8198899557285,43.3656342943986,55.2902160187087,44.9750615588445,46.6451186526713,47.6254238214207,40.3213486449465,50.8136371988664,25.199446275607,0,0,0,0,0,0,0,0,0,0,0.351339142772504,1.0478326039817,0,0,1.9472843619281,1.21890816109487,2.39324328933957,1.19245312152671,2.28797964312051,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.0299711487859,46.533631697799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87894419479671,6.08411089362018,5.05345951781676,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.51128545716063,0,0,0,0,0,0,0,25.8916682625048,35.4655368363469,36.2254325763989,33.2408463964548,0,0,0,0.167516265334349,0,62.9165900115633,32.9077605124427,62.1623270154053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.5942133813148,25.4542756965968,32.4451775722471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0,0.329294892959902,0,0,0,2.68120910214315,0,2.16530741786592,0,0,0,0,33.4915422093232,23.7037534214136,26.2037706100115,39.3082429505352,42.370314127878,34.369085493214,26.4615404246676,30.9318818754765,0,0,0,62.05826049199,0,0,0,0,0,0,0,14.3206560837864,0,0.313359791546046,0,0,0,0,2.55507742614196,0,0,0,0,0,0.278406173895242,0,0,0,0,0,1.90460633053462,0,40.8997220298346,0,0,0,0,0,1.1253553312841,0,30.4887167319505,0,1.9924798825107,38.9560320898918,0,0,64.8656924779836,0,0.0898683511473268,0,0,6.11589114948988,9.57932369387759,0,0,0.74214478529481,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.844175070377856,0,0.331737779793674,0,0.219385397153973,0,0,1.07730361905316,0,0,0,0,0.638002319463839,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,2.29989667708682,2.4441205797345,42.6990425300096,31.5088044313582,25.0612678813093,0.876214728748802,0.802577647298789,0,14.7788379264689,0,0,0,3.62972148145992,0.61214552326098,3.22251556105289,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,3.39461557709468,0,0.677942222341597,0,0,0.50648636764703,0,0.0801588202515337,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,1.50595916781192,0,0,39.1702157876179,1.11712960508902,0.687481272035051,0,0.599037001496973,0.429226048136571,0.446342914883745,0.470284307407084,0,0,0.393915911536118,0,0.13480708770837,0,16.1726064245648,0,0.817220436669454,0,0,0,0.674921674654501,1.5476039091159,0.242998226632099,0,1.18208560948797,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,0,0.517131825446202,1.05786081394152,0,0,6.30045734149399,1.57204305099666,7.87054205159671,22.3274709815378,13.8328142328561,29.1084310130341,0,0,0.7520696820681,0,0,0,0,0.366078794705889,0.876336514945499,0.573409195690071,0.998361463831671,1.17983165588629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,12.6659200745603,5.58032329316125,20.9363704647481,0,0,0,0.39997479170986,0,12.0550485762571,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,8.04389799012784,0,0,0,0.385375350578757,0,0.957803154342908,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0.405225507710368,0,0.826747186004736,0.507326481551255,0.546974809018219,4.38606213485746,0.992422356778588,0,0,0.535701835878287,0.672567444437648,3.03482802118316,0.682986574053893,0.620916591138472,58.999801628559,4.6301762548103,0.883606528698812,0.394636641377094,0,0,0.941917114206168,0.314231179832004,0,0,0,0,1.42953088353313,0,0,0,0,0,0,0,3.44181887056222,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,3.00979216620984,0.655678681511872,0,0.490296643507811,0,1.76677620403451,1.48523200163543,0,0,26.315497034359,25.460865749563,31.1816406485778,0,0,0,0.730336388246517,12.3856906519226,2.43677291357467,0,0.339957450954573,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.267964130156178,0.829169439458779,1.24119595034274,3.62497769231668,0.476128862927481,3.1648565819643,5.8970978581065,0,0.318235791390825,0.202117188958219,1.30630048738177,0,40.2765277027233,5.02055437748735,0.332660356546013,0,0.106727345877715,0,0,0,0.611207220914332,0,0,28.9834262771078,44.8795889224526 | |||
|short_description=p1@SP140 | |||
}} |
Revision as of 09:06, 21 January 2014
Short description: | p1@SP140 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SP140_5end |
Coexpression cluster: | C1325_CD19_cord_Eosinophils_b_B_Neutrophils_acute |
Association with transcript: | 0bp_to_ENST00000343805, ENST00000350136, ENST00000392044, ENST00000392045, ENST00000417495, ENST00000420434, ENST00000486687, ENST00000537563, ENST00000543928, NM_001005176, NM_007237, uc002vqj.2, uc002vqk.2, uc002vql.2, uc002vqm.2, uc002vqn.2, uc010fxl.2, uc010zma.1_5end |
EntrezGene: | SP140 |
HGNC: | 17133 |
UniProt: | E9PFJ6F8W6B8E7EX75Q13342E7ESH9E7EUR5F5GY84F5H4B7B4DVW8Q6NSG4Q3KR17Q8IWJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.86e-40 | 98 |
blood island | 9.86e-40 | 98 |
hemolymphoid system | 1.97e-36 | 108 |
immune system | 1.02e-24 | 93 |
bone marrow | 1.94e-22 | 76 |
bone element | 1.44e-19 | 82 |
skeletal element | 2.21e-16 | 90 |
blood | 1.31e-14 | 15 |
haemolymphatic fluid | 1.31e-14 | 15 |
organism substance | 1.31e-14 | 15 |
skeletal system | 3.44e-13 | 100 |
connective tissue | 5.74e-11 | 371 |
lateral plate mesoderm | 2.11e-09 | 203 |
hemopoietic organ | 5.38e-07 | 7 |
immune organ | 5.38e-07 | 7 |