FFCP PHASE1:Hg19::chr20:44574464..44574477,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C69 | |||
|description=CAGE_peak_at_chr20:44574464..44574477,+ | |||
|id=chr20:44574464..44574477,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.03e-09!65;CL:0000860!1.80e-09!45;CL:0000557!1.18e-08!71;CL:0002194!1.35e-08!63;CL:0000576!1.35e-08!63;CL:0000040!1.35e-08!63;CL:0000559!1.35e-08!63;CL:0002057!1.48e-08!42;CL:0000763!3.58e-08!112;CL:0000049!3.58e-08!112;CL:0000839!1.74e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.39e-66;1!CL:0000911;2.39e-66;1!CL:0000814;2.39e-66;1!CL:0000084;1.03e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.39e-66,1;CL:0000914,2.39e-66,1;CL:0000911,2.39e-66,1;CL:0000814,2.39e-66,1;CL:0002042,2.39e-66,1;CL:0002039,2.39e-66,1;CL:0002040,2.39e-66,1;CL:0002041,2.39e-66,1;CL:0000893,5.04e-34,2;CL:0002489,5.04e-34,2;CL:0000809,5.04e-34,2;CL:0000808,5.04e-34,2;CL:0000894,5.04e-34,2;CL:0000806,5.04e-34,2;CL:0000807,5.04e-34,2;CL:0000805,5.04e-34,2;CL:0002425,5.04e-34,2;CL:0000084,1.03e-11,25;CL:0000827,1.03e-11,25 | |||
|ontology_enrichment_development_v019=CL:0002425;5.04e-34;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2531;8.53e-11;51!DOID:0060083;8.53e-11;51!DOID:0060058;5.73e-08;10!DOID:1240;2.60e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.06e-12,51;DOID:0060083,1.06e-12,51;DOID:0060058,5.73e-08,10;DOID:1240,7.07e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001474!9.12e-08!86;UBERON:0002371!2.29e-07!80;UBERON:0004765!3.87e-07!101;UBERON:0001434!3.87e-07!101;UBERON:0002390!4.54e-07!102;UBERON:0003061!4.54e-07!102;UBERON:0002193!4.76e-07!112;UBERON:0002405!8.95e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.69e-18,4;UBERON:0005058,8.69e-18,4;UBERON:0009113,8.69e-18,4;UBERON:0003295,8.69e-18,4;UBERON:0005562,8.69e-18,4;UBERON:0003351,2.45e-12,6;UBERON:0004177,8.99e-11,7;UBERON:0005057,8.99e-11,7;UBERON:0000974,6.13e-08,10;UBERON:0003408,6.13e-08,10;UBERON:0001042,6.13e-08,10;UBERON:0009145,6.13e-08,10;UBERON:0006562,2.47e-07,11;UBERON:0009722,2.47e-07,11;UBERON:0007690,2.47e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.564727018627814,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0.211255286311942,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81089489577993,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,1.36771666781428,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.921482106297696,0,0,0,8.07538983711122,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.126621591911757,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:44574464..44574477,+ | |||
}} |
Revision as of 11:38, 21 January 2014
Short description: | p@chr20:44574464..44574477, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:44574464..44574477, + |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.39e-66 | 1 |
immature NK T cell | 2.39e-66 | 1 |
effector T cell | 2.39e-66 | 1 |
mature NK T cell | 2.39e-66 | 1 |
immature NK T cell stage IV | 2.39e-66 | 1 |
immature NK T cell stage I | 2.39e-66 | 1 |
immature NK T cell stage II | 2.39e-66 | 1 |
immature NK T cell stage III | 2.39e-66 | 1 |
thymocyte | 5.04e-34 | 2 |
double negative thymocyte | 5.04e-34 | 2 |
double-positive, alpha-beta thymocyte | 5.04e-34 | 2 |
DN4 thymocyte | 5.04e-34 | 2 |
DN1 thymic pro-T cell | 5.04e-34 | 2 |
DN2 thymocyte | 5.04e-34 | 2 |
DN3 thymocyte | 5.04e-34 | 2 |
immature single positive thymocyte | 5.04e-34 | 2 |
early T lineage precursor | 5.04e-34 | 2 |
T cell | 1.03e-11 | 25 |
pro-T cell | 1.03e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.69e-18 | 4 |
hemolymphoid system gland | 8.69e-18 | 4 |
thymic region | 8.69e-18 | 4 |
pharyngeal gland | 8.69e-18 | 4 |
thymus primordium | 8.69e-18 | 4 |
pharyngeal epithelium | 2.45e-12 | 6 |
hemopoietic organ | 8.99e-11 | 7 |
immune organ | 8.99e-11 | 7 |
neck | 6.13e-08 | 10 |
gland of gut | 6.13e-08 | 10 |
chordate pharynx | 6.13e-08 | 10 |
pharyngeal region of foregut | 6.13e-08 | 10 |
pharynx | 2.47e-07 | 11 |
entire pharyngeal arch endoderm | 2.47e-07 | 11 |
early pharyngeal endoderm | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.06e-12 | 51 |
immune system cancer | 1.06e-12 | 51 |
lymphoma | 5.73e-08 | 10 |
leukemia | 7.07e-08 | 39 |