FFCP PHASE1:Hg19::chr22:23558933..23558954,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=613 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1014 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc011aiy.1_5end | |||
|description=CAGE_peak_12_at_BCR_5end | |||
|id=chr22:23558933..23558954,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.12e-19!172;CL:0000566!1.12e-19!172;CL:0000988!3.30e-18!182;CL:0002032!1.21e-17!165;CL:0000837!1.21e-17!165;CL:0000763!8.37e-13!112;CL:0000049!8.37e-13!112;CL:0000817!3.93e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!1.46e-37!39;DOID:2531!1.95e-34!51;DOID:0060083!1.95e-34!51;DOID:8692!6.16e-34!31;DOID:0050686!1.23e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.22e-10;31!DOID:2531;2.23e-09;51!DOID:0060083;2.23e-09;51!DOID:1240;1.63e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.71e-11,51;DOID:0060083,6.71e-11,51;DOID:8692,2.52e-10,31;DOID:1240,2.36e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.23e-66;2!UBERON:0005058;1.23e-66;2!UBERON:0009113;1.23e-66;2!UBERON:0004177;1.95e-27;5!UBERON:0005057;1.95e-27;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.06e-34,4;UBERON:0005058,5.06e-34,4;UBERON:0009113,5.06e-34,4;UBERON:0003295,5.06e-34,4;UBERON:0005562,5.06e-34,4;UBERON:0003351,4.34e-23,6;UBERON:0004177,5.89e-20,7;UBERON:0005057,5.89e-20,7;UBERON:0000974,2.66e-14,10;UBERON:0003408,2.66e-14,10;UBERON:0001042,2.66e-14,10;UBERON:0009145,2.66e-14,10;UBERON:0006562,4.25e-13,11;UBERON:0009722,4.25e-13,11;UBERON:0007690,4.25e-13,11;UBERON:0008814,2.17e-08,18;UBERON:0001557,5.35e-08,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0.432807638929335,0.355709216742071,0.159426272728822,1.99579371432817,0,0.211673582723883,0.324621940274555,2.80797178113459,0.684704037099577,0.156679895773023,2.50634477090067,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0.976940477010201,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784901281975124,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77732312294826,3.91070700063905,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |||
|short_description=p12@BCR | |||
}} |
Revision as of 14:50, 21 January 2014
Short description: | p12@BCR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_BCR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc011aiy.1_5end |
EntrezGene: | BCR |
HGNC: | 1014 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.06e-34 | 4 |
hemolymphoid system gland | 5.06e-34 | 4 |
thymic region | 5.06e-34 | 4 |
pharyngeal gland | 5.06e-34 | 4 |
thymus primordium | 5.06e-34 | 4 |
pharyngeal epithelium | 4.34e-23 | 6 |
hemopoietic organ | 5.89e-20 | 7 |
immune organ | 5.89e-20 | 7 |
neck | 2.66e-14 | 10 |
gland of gut | 2.66e-14 | 10 |
chordate pharynx | 2.66e-14 | 10 |
pharyngeal region of foregut | 2.66e-14 | 10 |
pharynx | 4.25e-13 | 11 |
entire pharyngeal arch endoderm | 4.25e-13 | 11 |
early pharyngeal endoderm | 4.25e-13 | 11 |
pharyngeal arch system | 2.17e-08 | 18 |
upper respiratory tract | 5.35e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.71e-11 | 51 |
immune system cancer | 6.71e-11 | 51 |
myeloid leukemia | 2.52e-10 | 31 |
leukemia | 2.36e-08 | 39 |