FFCP PHASE1:Hg19::chr3:81265656..81265677,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:81265656..81265677,+ | |||
|id=chr3:81265656..81265677,+ | |||
|ontology_enrichment_celltype=CL:0000680!4.67e-18!57;CL:0000056!4.67e-18!57;CL:0000355!4.67e-18!57;CL:0000187!6.87e-18!54;CL:0000183!9.30e-16!59;CL:0000393!2.24e-15!60;CL:0000211!2.24e-15!60;CL:0000359!1.29e-13!32;CL:0000055!4.75e-13!180;CL:0000192!4.24e-12!42;CL:0000514!4.24e-12!42;CL:0000222!6.37e-12!119;CL:0000188!2.00e-10!9;CL:0002551!3.21e-08!6;CL:0000144!4.67e-08!625;CL:0000048!3.72e-07!430;CL:0000064!6.32e-07!3;CL:0005012!6.32e-07!3;CL:0000067!6.32e-07!3;CL:0002304!6.32e-07!3;CL:0002371!6.90e-07!591;CL:0000594!7.29e-07!3;CL:0000723!7.81e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002539;4.31e-17;10!CL:0000359;4.24e-12;32!CL:0000187;2.36e-10;55!CL:0000192;1.63e-08;43!CL:0000342;2.52e-08;1!CL:0002565;2.52e-08;1!CL:0002601;7.33e-08;1!CL:0000319;7.33e-08;1!CL:0002594;1.32e-07;4!CL:0000393;1.35e-07;61!CL:0000211;1.35e-07;61!CL:0000188;3.01e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,4.39e-17,10;CL:0000187,2.63e-15,55;CL:0000680,2.12e-14,58;CL:0000056,2.12e-14,58;CL:0000355,2.12e-14,58;CL:0000393,1.39e-13,61;CL:0000211,1.39e-13,61;CL:0000359,2.36e-12,32;CL:0000192,3.55e-11,43;CL:0000514,3.55e-11,43;CL:0000222,1.40e-09,121;CL:0000342,2.71e-08,1;CL:0002565,2.71e-08,1;CL:0000319,5.40e-08,1;CL:0002601,1.21e-07,1;CL:0002594,1.75e-07,4;CL:0000188,2.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;1.63e-08;43!CL:0000355;8.16e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!1.98e-16!14;DOID:120!2.96e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:3030;7.33e-08;1!DOID:2394;9.18e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,5.40e-08,1;DOID:2394,1.15e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!3.22e-20!70;UBERON:0000914!1.15e-19!83;UBERON:0002329!1.15e-19!83;UBERON:0003077!1.15e-19!83;UBERON:0003059!1.15e-19!83;UBERON:0007282!1.15e-19!83;UBERON:0009618!1.15e-19!83;UBERON:0007285!1.15e-19!83;UBERON:0001134!2.23e-16!61;UBERON:0002036!2.23e-16!61;UBERON:0003082!2.23e-16!61;UBERON:0000486!5.98e-16!82;UBERON:0002385!1.28e-15!63;UBERON:0001015!1.28e-15!63;UBERON:0000383!1.28e-15!63;UBERON:0002203!3.25e-12!6;UBERON:0001768!3.25e-12!6;UBERON:0005256!7.08e-12!143;UBERON:0002118!5.84e-11!5;UBERON:0004532!5.84e-11!5;UBERON:0002200!6.29e-11!11;UBERON:0006876!6.29e-11!11;UBERON:0002049!3.52e-10!79;UBERON:0007798!3.52e-10!79;UBERON:0004535!6.52e-10!110;UBERON:0001009!1.94e-09!113;UBERON:0001637!2.03e-09!42;UBERON:0003509!2.03e-09!42;UBERON:0004572!2.03e-09!42;UBERON:0000490!2.30e-09!138;UBERON:0001456!2.59e-09!21;UBERON:0000992!3.48e-09!13;UBERON:0000488!4.74e-09!4;UBERON:0000019!1.06e-08!19;UBERON:0000047!1.06e-08!19;UBERON:0004088!1.06e-08!19;UBERON:0003072!1.06e-08!19;UBERON:0003071!1.06e-08!19;UBERON:0004128!1.06e-08!19;UBERON:0007625!1.61e-08!11;UBERON:0000481!1.69e-08!347;UBERON:0004573!3.19e-08!33;UBERON:0004571!3.19e-08!33;UBERON:0001801!3.22e-08!14;UBERON:0000970!3.68e-08!20;UBERON:0000119!8.83e-08!312;UBERON:0002104!1.13e-07!21;UBERON:0000483!1.58e-07!309;UBERON:0004872!2.64e-07!84;UBERON:0001778!6.32e-07!3;UBERON:0001775!6.32e-07!3;UBERON:0000020!7.93e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;4.31e-17;10!UBERON:0004695;4.31e-17;10!UBERON:0002111;4.31e-17;10!UBERON:0004178;4.31e-17;10!UBERON:0002385;3.64e-12;31!UBERON:0001015;3.64e-12;31!UBERON:0000383;3.64e-12;31!UBERON:0000947;2.24e-11;21!UBERON:0010191;2.24e-11;21!UBERON:0001135;2.49e-11;15!UBERON:0002506;2.52e-08;1!UBERON:0001769;2.52e-08;1!UBERON:0000488;1.12e-07;4!UBERON:0001310;1.32e-07;4!UBERON:0004573;5.95e-07;33!UBERON:0004571;5.95e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,4.39e-17,10;UBERON:0004695,4.39e-17,10;UBERON:0002111,4.39e-17,10;UBERON:0004178,4.39e-17,10;UBERON:0001134,2.51e-13,62;UBERON:0002036,2.51e-13,62;UBERON:0003082,2.51e-13,62;UBERON:0002385,7.67e-13,64;UBERON:0001015,7.67e-13,64;UBERON:0000383,7.67e-13,64;UBERON:0000947,2.26e-11,21;UBERON:0010191,2.26e-11,21;UBERON:0002329,2.34e-11,71;UBERON:0003059,2.34e-11,71;UBERON:0007282,2.34e-11,71;UBERON:0004290,2.34e-11,71;UBERON:0009618,2.34e-11,71;UBERON:0001135,2.52e-11,15;UBERON:0003077,3.61e-11,72;UBERON:0007285,3.61e-11,72;UBERON:0007524,5.51e-11,73;UBERON:0007503,3.86e-10,78;UBERON:0000486,2.14e-09,83;UBERON:0001637,2.94e-09,42;UBERON:0003509,2.94e-09,42;UBERON:0004572,2.94e-09,42;UBERON:0002049,1.71e-08,78;UBERON:0007798,1.71e-08,78;UBERON:0002506,2.71e-08,1;UBERON:0001769,2.71e-08,1;UBERON:0000488,1.30e-07,4;UBERON:0001310,1.75e-07,4;UBERON:0004573,4.97e-07,33;UBERON:0004571,4.97e-07,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,4.70627602516243,3.61616716814386,4.38186054232424,2.92759679274304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22895262313288,0.665188192387692,0.263504357079378,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.40105183773854,0,0,0.560677600142307,0,0,0.622422070799533,0,0.163461903113459,0,0,0,0.312160076830321,0,0.597794722207204,0.704606991862589,0.161872944368132,0.561803226808994,0.408308342509787,0,0.103325781175765,0,0,0,0,0.336672227908132,0,1.38532057742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60292401626904,0,0,0,0,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0.355391948742546,0,3.61727252471503,0,2.89921674427965,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0.813795071099207,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,4.46740989632469,1.99554777143968,0.137836572484531,0.322260734604821,1.45016693914229,0.426133137080504,0.0890320356467374,0,0,0,0,0,0,0,1.23213432070436,0,0,0.55597265731176,0.715624433709956,0,1.2655176988749,0.190630193923825,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0.731140468893853,0,0,0,0,0,0.66343897524122,0,0,0,2.02910376962704,0.92947049429925,0,0,0,1.07001315444375,1.06428319221179,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30634944043764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.467426619694449,0,0.568209015825267,0.50313580350515,0,2.05956061557231,0.302461847526478,0,0.147855149989634,0.477890301491107,0.449803112163605,0.465788870628778,0,0,0.521745061811734,1.20206087197775,3.04644169735036,0.813741466409323,1.27294061441792,1.07410557042488,0.928067519756987,0.398095888698616,0,0,0,0,0,0,0,0,0.926089897295336,0,0,0,0,3.88716121080938,0,0.168942440653073,0,0,0,0,0,0,0,0,1.47463745252232,0,0,0,0,2.27006381426734,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,1.94334832096759,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.426067023795788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:81265656..81265677,+ | |||
}} |
Revision as of 19:55, 21 January 2014
Short description: | p@chr3:81265656..81265677, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:81265656..81265677, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 4.39e-17 | 10 |
muscle cell | 2.63e-15 | 55 |
muscle precursor cell | 2.12e-14 | 58 |
myoblast | 2.12e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.12e-14 | 58 |
electrically responsive cell | 1.39e-13 | 61 |
electrically active cell | 1.39e-13 | 61 |
vascular associated smooth muscle cell | 2.36e-12 | 32 |
smooth muscle cell | 3.55e-11 | 43 |
smooth muscle myoblast | 3.55e-11 | 43 |
mesodermal cell | 1.40e-09 | 121 |
pigment cell (sensu Vertebrata) | 2.71e-08 | 1 |
iris pigment epithelial cell | 2.71e-08 | 1 |
mucus secreting cell | 5.40e-08 | 1 |
uterine smooth muscle cell | 1.21e-07 | 1 |
smooth muscle cell of the umbilical artery | 1.75e-07 | 4 |
cell of skeletal muscle | 2.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 4.39e-17 | 10 |
arterial system smooth muscle | 4.39e-17 | 10 |
artery smooth muscle tissue | 4.39e-17 | 10 |
aorta smooth muscle tissue | 4.39e-17 | 10 |
skeletal muscle tissue | 2.51e-13 | 62 |
striated muscle tissue | 2.51e-13 | 62 |
myotome | 2.51e-13 | 62 |
muscle tissue | 7.67e-13 | 64 |
musculature | 7.67e-13 | 64 |
musculature of body | 7.67e-13 | 64 |
aorta | 2.26e-11 | 21 |
aortic system | 2.26e-11 | 21 |
somite | 2.34e-11 | 71 |
presomitic mesoderm | 2.34e-11 | 71 |
presumptive segmental plate | 2.34e-11 | 71 |
dermomyotome | 2.34e-11 | 71 |
trunk paraxial mesoderm | 2.34e-11 | 71 |
smooth muscle tissue | 2.52e-11 | 15 |
paraxial mesoderm | 3.61e-11 | 72 |
presumptive paraxial mesoderm | 3.61e-11 | 72 |
dense mesenchyme tissue | 5.51e-11 | 73 |
epithelial vesicle | 3.86e-10 | 78 |
multilaminar epithelium | 2.14e-09 | 83 |
artery | 2.94e-09 | 42 |
arterial blood vessel | 2.94e-09 | 42 |
arterial system | 2.94e-09 | 42 |
vasculature | 1.71e-08 | 78 |
vascular system | 1.71e-08 | 78 |
iris epithelium | 2.71e-08 | 1 |
iris | 2.71e-08 | 1 |
atypical epithelium | 1.30e-07 | 4 |
umbilical artery | 1.75e-07 | 4 |
systemic artery | 4.97e-07 | 33 |
systemic arterial system | 4.97e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 5.40e-08 | 1 |
ovarian cancer | 1.15e-07 | 14 |