FFCP PHASE1:Hg19::chr3:195771058..195771063,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:195771058..195771063,- | |||
|id=chr3:195771058..195771063,- | |||
|ontology_enrichment_celltype=CL:0000542!1.61e-07!53;CL:0000051!1.61e-07!53;CL:0000838!4.15e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0002127;4.78e-12;1!CL:0000911;4.78e-12;1!CL:0000814;4.78e-12;1!CL:0000084;2.60e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,5.62e-12,1;CL:0000914,5.62e-12,1;CL:0000911,5.62e-12,1;CL:0000814,5.62e-12,1;CL:0002042,5.62e-12,1;CL:0002039,5.62e-12,1;CL:0002040,5.62e-12,1;CL:0002041,5.62e-12,1;CL:0000084,2.62e-10,25;CL:0000827,2.62e-10,25 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.78e-12;1!UBERON:0005425;4.78e-12;1 | |||
|ontology_enrichment_disease=DOID:14566!1.26e-36!239;DOID:162!1.62e-36!235;DOID:0050687!8.35e-24!143;DOID:0050686!4.13e-21!137;DOID:305!4.77e-17!106;DOID:2531!6.50e-15!51;DOID:0060083!6.50e-15!51;DOID:1240!5.15e-10!39;DOID:1749!4.29e-09!14;DOID:0060058!3.33e-07!10;DOID:8692!5.63e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:178;2.63e-12;1!DOID:326;2.63e-12;1!DOID:3978;2.63e-12;1!DOID:3394;2.63e-12;1!DOID:5844;2.63e-12;1!DOID:8552;3.09e-12;1!DOID:0060060;1.13e-11;1!DOID:3151;1.13e-11;1!DOID:0060061;1.13e-11;1!DOID:3149;1.13e-11;1!DOID:8691;1.13e-11;1!DOID:114;8.93e-07;2!DOID:3307;9.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.63e-12,1;DOID:326,2.63e-12,1;DOID:3978,2.63e-12,1;DOID:3394,2.63e-12,1;DOID:5844,2.63e-12,1;DOID:8552,2.93e-12,1;DOID:3151,8.64e-12,1;DOID:3149,8.64e-12,1;DOID:0060060,1.63e-11,1;DOID:0060061,1.63e-11,1;DOID:8691,1.63e-11,1;DOID:2531,2.00e-09,51;DOID:0060083,2.00e-09,51;DOID:162,9.23e-08,235;DOID:14566,1.50e-07,239;DOID:114,8.93e-07,2;DOID:3307,9.96e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.78e-12;1!UBERON:0001785;4.78e-12;1!UBERON:0002464;4.78e-12;1!UBERON:0004904;4.78e-12;1!UBERON:0001021;4.78e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.06e-12,1;UBERON:0001785,4.06e-12,1;UBERON:0002464,4.06e-12,1;UBERON:0004904,4.06e-12,1;UBERON:0001021,4.06e-12,1;UBERON:0003902,4.06e-12,1;UBERON:0005425,4.06e-12,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.309632246632152,0,0,0,0.387336002901508,0,0,0,0.601633342410425,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0.393419540227666,0.393010762749165,1.23360899399706,0,0,0,0,0,0,0,0.270803863765016,0,0.520237390239513,0,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35378802386407,0.394061520403854,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0.412164046590889,0.183138929636687,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.28853842595289,1.84968792705877,0.159426272728822,0,0.383010740264733,0,0,0.280797178113459,0.912938716132769,0,2.50634477090067,0.50787533340481,0.321176150207399,0.201799707191048,1.27753871307098,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0.557216921387392,0,0,0,0,0,0,0,1.31843099381408,2.95575571379191,0,0.276283915531148,0,0.102268682502155,0.246169610922139,0.311039587661807,0.629078458031288,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0.874599999961957,0,0.341380344856499,0.254253650292766,0,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0.922255617552241,0,0.325942115766024,0,0,0,0,0.470940769185074,3.98908036560375,0,0,0.335643173951685,0.569261198172555,0.317873157960757,0.632994193584081,0,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0,0,0,0.364909578431332,0.586993856796269,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0.347119476670262,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0,0.274083849293502,0.19871461170299,0,2.54216797555244,0,0.213452994739353,0,0.432271251462318,0.229073192331831,0,0.576219191952599,0.248505071130865,0.471388069233591,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,4.79229601197579,0,0,0,0,0,0.0787831823072236,0,0,0.393709926058995,0.508039992394707,0,0,0,0,0,0.2249738915515,0,0,1.34173875039706,0,0,0.422401346077626,0,0.191915197319445,0,0,0,0,0,0,0,0.574647645245373,0,0,0.146552233678082,0,0.129282956361551,0,0.171086837884329,1.40963004463334,0,0,0,0,0,0.243585196761792,0,0.544017803369474,0,0,0,0.785270481251171,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0.211312123358627,1.19992437512958,0.106691729694141,0.172214979660816,0.567515953566836,0,0,0,0.127894371303652,0.539124056983409,0.314531883711793,0,0.33946505990805,0.212574920101683,1.23935764259002,0,0.318004350653419,0.23658523500376,0,0,0,0,0,0,0,0,0,0.161475645631851,2.85538840518309,0.0981477185010256,0.589848616738702,0.917142992608395,0.462102664601353,0,0,0,0,0.20170506870352,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0.345701962667338,0,0,0,0.118193840883968,0.222462803784138,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0.813689977576877,1.21700790611806,3.20684545892101,0,0,0,0,0.118332000730565,0.170426809518315,0,0.4582137370881,0,0,0.335566295393377,0.098150233615243,0.365753774946808,0,0,0,0,0,0.198950775161368,0,0.22589216407792,0,0.603851374266694,0.0771741581079447,0,0,0,0.235676547101626,0,0,0.8453114551668,0,0,0,0.89947040332436,0.535661815816973,0.352894871715692,0.401206833445841,0,0,0,0,0,0.436350690340377,0,0,0,0,0.126166424835079,0.437062287854782,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.320182037633146,0,0,2.34640942403454,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr3:195771058..195771063,- | |||
}} |
Revision as of 23:31, 21 January 2014
Short description: | p@chr3:195771058..195771063, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:195771058..195771063, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 5.62e-12 | 1 |
immature NK T cell | 5.62e-12 | 1 |
effector T cell | 5.62e-12 | 1 |
mature NK T cell | 5.62e-12 | 1 |
immature NK T cell stage IV | 5.62e-12 | 1 |
immature NK T cell stage I | 5.62e-12 | 1 |
immature NK T cell stage II | 5.62e-12 | 1 |
immature NK T cell stage III | 5.62e-12 | 1 |
T cell | 2.62e-10 | 25 |
pro-T cell | 2.62e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.06e-12 | 1 |
cranial nerve | 4.06e-12 | 1 |
nerve trunk | 4.06e-12 | 1 |
nerve connecting eye with brain | 4.06e-12 | 1 |
nerve | 4.06e-12 | 1 |
retinal neural layer | 4.06e-12 | 1 |
presumptive neural retina | 4.06e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.63e-12 | 1 |
ischemia | 2.63e-12 | 1 |
extrinsic cardiomyopathy | 2.63e-12 | 1 |
myocardial ischemia | 2.63e-12 | 1 |
myocardial infarction | 2.63e-12 | 1 |
chronic myeloid leukemia | 2.93e-12 | 1 |
skin squamous cell carcinoma | 8.64e-12 | 1 |
keratoacanthoma | 8.64e-12 | 1 |
non-Hodgkin lymphoma | 1.63e-11 | 1 |
cutaneous T cell lymphoma | 1.63e-11 | 1 |
mycosis fungoides | 1.63e-11 | 1 |
hematologic cancer | 2.00e-09 | 51 |
immune system cancer | 2.00e-09 | 51 |
cancer | 9.23e-08 | 235 |
disease of cellular proliferation | 1.50e-07 | 239 |
heart disease | 8.93e-07 | 2 |
teratoma | 9.96e-07 | 2 |