FFCP PHASE1:Hg19::chr4:2828548..2828556,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=6452 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10825 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-20bp_to_ENST00000504450_5end | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_9_at_SH3BP2_5end | |||
|id=chr4:2828548..2828556,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.34e-32!76;CL:0002057!2.33e-29!42;CL:0002194!5.75e-29!63;CL:0000576!5.75e-29!63;CL:0000040!5.75e-29!63;CL:0000559!5.75e-29!63;CL:0000860!6.21e-29!45;CL:0002009!1.68e-28!65;CL:0000839!2.81e-28!70;CL:0000557!8.08e-28!71;CL:0000763!1.76e-22!112;CL:0000049!1.76e-22!112;CL:0000738!2.46e-18!140;CL:0000988!2.05e-16!182;CL:0002087!1.22e-15!119;CL:0002031!2.81e-15!124;CL:0000037!1.59e-14!172;CL:0000566!1.59e-14!172;CL:0002032!3.18e-14!165;CL:0000837!3.18e-14!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.98e-62;33!CL:0002057;2.98e-62;33!CL:0000473;7.55e-53;39!CL:0000234;7.55e-53;39!CL:0000576;9.78e-36;48!CL:0000766;3.90e-29;69!CL:0000763;1.42e-14;100!CL:0000738;2.81e-09;136!CL:0000775;2.81e-09;3!CL:0002087;4.94e-09;104!CL:0000094;1.52e-08;8!CL:0000081;1.95e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.44e-69,48;CL:0000234,3.44e-69,48;CL:0000860,2.30e-67,42;CL:0002057,2.30e-67,42;CL:0000766,5.07e-62,72;CL:0002194,2.04e-56,59;CL:0000576,2.04e-56,59;CL:0000040,2.04e-56,59;CL:0000559,2.04e-56,59;CL:0002009,2.98e-54,61;CL:0000839,2.33e-52,66;CL:0000557,1.98e-51,67;CL:0000763,1.69e-39,108;CL:0000049,1.69e-39,108;CL:0000738,1.29e-30,136;CL:0002087,2.98e-27,115;CL:0002031,8.82e-26,120;CL:0000988,1.94e-24,177;CL:0002032,5.08e-24,161;CL:0000837,5.08e-24,161;CL:0000037,9.15e-24,168;CL:0002320,2.32e-09,361;CL:0000775,3.39e-09,3;CL:0000134,3.68e-09,354;CL:0000094,1.53e-08,8;CL:0000081,2.24e-08,11;CL:0000219,7.52e-08,386;CL:0000723,3.35e-07,433;CL:0000048,5.98e-07,427;CL:0000034,7.70e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.67e-50;42!CL:0000049;4.45e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.28e-29!102;UBERON:0003061!5.28e-29!102;UBERON:0002193!3.95e-27!112;UBERON:0002371!2.56e-23!80;UBERON:0001474!9.70e-23!86;UBERON:0004765!9.54e-19!101;UBERON:0001434!9.54e-19!101;UBERON:0002405!3.17e-16!115;UBERON:0002204!7.29e-08!167;UBERON:0003081!2.41e-07!216;UBERON:0000178!8.67e-07!15;UBERON:0000179!8.67e-07!15;UBERON:0000463!8.67e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.40e-45,98;UBERON:0003061,6.40e-45,98;UBERON:0002371,3.77e-44,76;UBERON:0002193,1.17e-41,108;UBERON:0001474,3.54e-40,82;UBERON:0002405,3.61e-36,93;UBERON:0004765,1.06e-35,90;UBERON:0001434,4.12e-31,100;UBERON:0003081,8.59e-19,203;UBERON:0002204,1.31e-14,167;UBERON:0000926,2.80e-09,315;UBERON:0004120,2.80e-09,315;UBERON:0006603,2.80e-09,315;UBERON:0002384,9.00e-09,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0,0.410623275218653,0.251085279189606,0.382067028739756,0.164201178899891,0.550975469195755,1.57345710739562,0.383829398097213,0.464448369948228,0,0.30120591877825,0,0.232401601740905,0.142169232487422,0,0.553995408531877,1.60435557976113,0.868043482863407,0.447830948479849,0.647787332037959,0.77272670290256,4.9435401185052,6.80176698639857,4.85168122375632,4.18372266430232,5.34518254428373,5.26500830521676,4.60307827715441,5.37937483711111,2.36482229888585,4.48169384957604,3.87290810150296,8.12558919566051,7.71793592124679,4.91231070104122,2.69668181334102,3.67300670845083,1.92557416245656,4.47535988059329,6.59702600373432,5.18605509816243,5.54092175692502,4.64334781805734,2.8369261234557,0.622822248995575,8.29120595347253,8.86520961314342,4.77815458351257,6.65939452896706,2.94622108790052,1.58231193720442,1.05627643155971,1.70083439972035,0.838634582033504,0.561643155732475,0.600707571366025,0.803627933485401,0.855038231223746,0.99458338599545,1.27864907635244,1.75996244461323,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.334372990781356,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0,0.328875809207352,0.552700035571697,1.15921234294021,0,0,0,0.566546713487831,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0.665188192387692,0.175669571386252,0.392937226493138,0.728590576585084,0,0,0.522389211897802,1.59549552622638,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0.550236083880135,0.208994966536811,1.03366703667732,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0.735326160691737,0,0.0892997282840798,0.44905874525234,0,0,0,0,2.63560834872127,0,0,0,0,0.529636723252875,1.43418310374407,0,0,0,0.49333509683432,0,0,0,0.756787138224657,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0.61246251376468,0.368502951935304,0.516628905878827,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0,0,0.179389635688862,0.213557388818567,0.211931901159562,1.50045548042201,0.309157587715317,1.03056216018252,0.744467425326359,0.506328996723799,0.292311015483596,0.504867548488229,0.460249493211497,0,0.355009592516614,0.10075209822764,0.508681776931463,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,0,1.28648187638577,4.14404764057442,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0.435758888184812,0.474541238222193,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0.301586917234893,0.185176890317059,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0,0.738651018262192,2.10603838625314,1.33768046059855,0,0.671928512795438,0.141775097242386,0,0,0,1.97065295158377,0.528290604079356,0,0.432359860250884,0.12624243342638,0.126995788584338,0,0,0,0,0.300343057843917,0,0.336393253036082,0,0.1466765716419,0,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0.502257091432126,2.10833939483032,0.239624855491583,1.14861935834114,0,0.434343920002738,0.61642896765115,0.179060963239896,0.112085143993527,0,0.215627574859517,0.256686072559497,1.01637849688985,1.30139853857622,0,0.335032530668698,0.637938751653163,3.74503511973591,17.9496875522415,1.24324654030811,0.12269149171914,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.260650843404249,0.587403472388222,1.71571711905428,0.413536052245775,1.07857100409308,0.853820462427555,0,0,0,0.496215615637554,0.460385919864187,0,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0.644566922551274,0,0,0.131124414959424,0,0.308061348417659,0,0,0.105551628892876,2.27466768141793,0.340187410553031,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0.261435451024901,0,0.328014645699706,0,0.309123034943167,0.27470839445503,0.577566499444116,0.574265537996172,0,0,0.096670718292122,0,0,0.137836572484531,0.644521469209642,0.435050081742686,0,0.356128142586949,0.495854746082934,0.768760269460425,1.53135254993501,0.30347334256665,0,0.94443704049192,0,0,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0,0.274537029736055,0.589062011728432,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.75894634753143,0,0,0,0,0.282431402330337,0,0,0,0,2.02979043692868,0.764637207142375,6.83576624608995,2.38231775457789,0.822724546172388,0.648473311192717,2.16012574895246,3.96562588147135,0,0,0,0,0,0,0.159426272728822,0.399158742865633,0,0.846694330895531,0,0.561594356226918,0,0,0,0,0.802940375518498,0,0.851692475380653,0.343505344755765,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0,0,0,0,0,0.844016498463076,0,0.16480387422676,0.211125408127993,0,0.276283915531148,0,0,0.246169610922139,0,0,0.358042349351218,1.02314474045374,0.197286811273867,0,0,0,0.0927680981618513,3.99227596002388,0,0.0874599999961957,0,0,0,0,0,0,0.694499979733169,0,0.241192877250816,0,0.221158519862449,0,0,0.10893846351899,0,0.0769502585037971,0,0,0.269272933229316,0.54323685961004,0.31900115973192,0,0,0,0.156980256395025,0,0.225595660617181,0.19606253431774,0,0,0,0.210998064528027,0,0,0.432777279484182,0,0.353830258013357,0,0.296521128680622,0.247127877893006,0.313265848516366,0.134802265961354,0,0.234264445725339,0.364909578431332,0,0,0.394584402849391,1.20990716048664,1.53036380815245,0.63186579628488,0.300646838828985,0,0,0,0.627865836814451,1.19472429772959,0.569219092059585,0.416024019039416,0.173559738335131,0,0,0.52418000472609,0,0.19351266257817,0.365446585430928,0.164230914106418,0.581934098930517,0,0.225980740780532,0.274083849293502,0.19871461170299,0.253243183823515,0.195551382734803,0,0,0.19980960958213,0,0,0.171594997861965,0.14405479798815,0,0.235694034616795,0.135904206073614,0.418411385249333,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0.199679000498991,0.858452096273142,0,0.53746777989381,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0.817220436669454,0.160753148465019,0.137539436597234,0,0.674921674654501,0,0.121499113316049,0,0.945668487590378,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0,0,0,0.258565912723101,1.58679122091228,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0.886068179966986,0.244052529803926,0.625954653532499,0,0.776503360757966,0.124192805882767,0.138348634936231,0.124980407962107,0,0,0,1.87333962322753,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0.899606224327209,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0.489473409012935,0,0.308801447160972,0.438568099157414,0.353378291891762,0.38582807654183,0.506827321959218,0,0.345430341731199,0,0.691292180758654,0.389720617678777,0,0.327130788511688,0.655219697692825,0,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0.127894371303652,0.215649622793364,0,0.436838552768056,0,0.425149840203366,0,0,0,0,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0.159633859057151,0,1.76450187355203,0.138314504928436,0.161475645631851,0,0.0981477185010256,0.11796972334774,0,0,0.762764190934334,0,0.198916222116275,0,0,0,0.261906694481422,0,0,0.270150338473579,0.781078098613847,0.620060389503552,0.19024743058172,0.546974809018219,0,0.992422356778588,0.351742488719241,0.255524855279191,0,0,0.606965604236632,0.455324382702595,0.709618961301111,0,0.857440047187092,0.339848664884159,0.0657727735628491,0,0,0.470958557103084,0,0,0,0.215927591218621,6.6885236304187,0.357382720883282,0.158013611732727,0,0,0,0,0.17071847709395,0,0.430227358820278,0.118332000730565,0,0,0,0,0,0,0.294450700845729,0.243835849964539,0,0.102662806856247,0,0,0.233939463462106,0.397901550322736,0.118920090777569,0.11294608203896,0.109940516745429,0.452888530700021,0.231522474323834,0,0,0,0,0,0.594092800654172,0,0,0.563903507879121,0.773494655682926,0.0999411559249289,0,0,0.160482733378337,0,0.917458566809082,0.430018749454354,0.157771562193185,0.203974470572744,0,0.5290268405154,0.743990036333503,0,0,0,0,0.126698501011437,0,0.534434810531121,0,0,0.227336094654718,0.267964130156178,1.65833887891756,1.03432995861895,0.426467963801962,0,0.0645889098360061,0.31037357147929,0,0,0.202117188958219,0,0,0.606168477131288,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0.628776414746108,0,0.488965776731466,0.813792356631477,0,0,0.961705476909699 | |||
|short_description=p9@SH3BP2 | |||
}} |
Revision as of 23:55, 21 January 2014
Short description: | p9@SH3BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SH3BP2_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | -20bp_to_ENST00000504450_5end |
EntrezGene: | SH3BP2 |
HGNC: | 10825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.44e-69 | 48 |
phagocyte | 3.44e-69 | 48 |
classical monocyte | 2.30e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.30e-67 | 42 |
myeloid leukocyte | 5.07e-62 | 72 |
monopoietic cell | 2.04e-56 | 59 |
monocyte | 2.04e-56 | 59 |
monoblast | 2.04e-56 | 59 |
promonocyte | 2.04e-56 | 59 |
macrophage dendritic cell progenitor | 2.98e-54 | 61 |
myeloid lineage restricted progenitor cell | 2.33e-52 | 66 |
granulocyte monocyte progenitor cell | 1.98e-51 | 67 |
myeloid cell | 1.69e-39 | 108 |
common myeloid progenitor | 1.69e-39 | 108 |
leukocyte | 1.29e-30 | 136 |
nongranular leukocyte | 2.98e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 8.82e-26 | 120 |
hematopoietic cell | 1.94e-24 | 177 |
hematopoietic oligopotent progenitor cell | 5.08e-24 | 161 |
hematopoietic multipotent progenitor cell | 5.08e-24 | 161 |
hematopoietic stem cell | 9.15e-24 | 168 |
connective tissue cell | 2.32e-09 | 361 |
neutrophil | 3.39e-09 | 3 |
mesenchymal cell | 3.68e-09 | 354 |
granulocyte | 1.53e-08 | 8 |
blood cell | 2.24e-08 | 11 |
motile cell | 7.52e-08 | 386 |
somatic stem cell | 3.35e-07 | 433 |
multi fate stem cell | 5.98e-07 | 427 |
stem cell | 7.70e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.40e-45 | 98 |
blood island | 6.40e-45 | 98 |
bone marrow | 3.77e-44 | 76 |
hemolymphoid system | 1.17e-41 | 108 |
bone element | 3.54e-40 | 82 |
immune system | 3.61e-36 | 93 |
skeletal element | 1.06e-35 | 90 |
skeletal system | 4.12e-31 | 100 |
lateral plate mesoderm | 8.59e-19 | 203 |
musculoskeletal system | 1.31e-14 | 167 |
mesoderm | 2.80e-09 | 315 |
mesoderm-derived structure | 2.80e-09 | 315 |
presumptive mesoderm | 2.80e-09 | 315 |
connective tissue | 9.00e-09 | 371 |