FFCP PHASE1:Hg19::chr5:134241225..134241230,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:134241225..134241230,+ | |||
|id=chr5:134241225..134241230,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.86e-25!53;CL:0000051!3.86e-25!53;CL:0000838!4.99e-24!52;CL:0000037!5.62e-12!172;CL:0000566!5.62e-12!172;CL:0000988!8.86e-12!182;CL:0000084!2.95e-11!25;CL:0000827!2.95e-11!25;CL:0000945!1.27e-10!24;CL:0000826!1.27e-10!24;CL:0002032!3.34e-10!165;CL:0000837!3.34e-10!165;CL:0002087!8.81e-10!119;CL:0000738!4.31e-09!140;CL:0002031!7.40e-09!124 | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.05e-29;1!CL:0000911;2.05e-29;1!CL:0000814;2.05e-29;1!CL:0000542;4.65e-12;53!CL:0000084;6.81e-11;25!CL:0000623;9.43e-11;3!CL:0000791;2.95e-07;18!CL:0000789;2.95e-07;18!CL:0002419;2.95e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.16e-29,1;CL:0000914,3.16e-29,1;CL:0000911,3.16e-29,1;CL:0000814,3.16e-29,1;CL:0002042,3.16e-29,1;CL:0002039,3.16e-29,1;CL:0002040,3.16e-29,1;CL:0002041,3.16e-29,1;CL:0000838,8.37e-20,52;CL:0000542,1.95e-19,53;CL:0000051,1.95e-19,53;CL:0000893,2.37e-15,2;CL:0002489,2.37e-15,2;CL:0000809,2.37e-15,2;CL:0000808,2.37e-15,2;CL:0000894,2.37e-15,2;CL:0000806,2.37e-15,2;CL:0000807,2.37e-15,2;CL:0000805,2.37e-15,2;CL:0002425,2.37e-15,2;CL:0000084,7.93e-11,25;CL:0000827,7.93e-11,25;CL:0000623,8.17e-11,3;CL:0000825,8.17e-11,3;CL:0002087,5.15e-09,115;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0002031,1.20e-08,120;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177;CL:0000738,1.18e-07,136;CL:0000791,3.14e-07,18;CL:0000789,3.14e-07,18;CL:0002420,3.14e-07,18;CL:0002419,3.14e-07,18;CL:0000790,3.14e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002425;1.91e-15;2!CL:0000051;4.65e-12;53!CL:0000790;2.95e-07;18 | |||
|ontology_enrichment_disease=DOID:162!7.68e-18!235;DOID:14566!5.13e-17!239;DOID:2531!6.58e-13!51;DOID:0060083!6.58e-13!51;DOID:0050686!1.06e-12!137;DOID:0060058!5.00e-12!10;DOID:305!6.06e-11!106;DOID:0050687!2.78e-09!143;DOID:1240!1.02e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.65e-07;51!DOID:0060083;1.65e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.32e-09,51;DOID:0060083,2.32e-09,51;DOID:1240,3.46e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.43e-08,4;UBERON:0005058,2.43e-08,4;UBERON:0009113,2.43e-08,4;UBERON:0003295,2.43e-08,4;UBERON:0005562,2.43e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0.542270404062111,0.568676929949686,0.880801318004542,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0,1.23360899399706,0,0.32592226663359,0,0,0.334231370655521,0,0.221533894583621,0,0,0,0.328875809207352,0,0.289803085735052,0.444859689486181,0,0,0,0.766440987203842,0,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.802320587350522,0.579297615531196,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,1.57624608161542,0.215627574859517,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.577076851905779,0.0711418433484141,0.318852545457645,0,0.191505370132367,0.423347165447766,0,0,1.36940807419915,0,0,0.338583555603207,0,0,0.425846237690326,0.687010689511529,0,0,0,0.390776190804081,0.278406173895242,0,0,0,0,0.18714054040822,0,0,0.891547074219827,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0.844501632511974,0,0,0,0,0.369254416383208,0,0.179736702294654,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0.296521128680622,0,0.208843899010911,0,0,0,0.182454789215666,0.19566461893209,0.485560759068186,0,0,0,0.063186579628488,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0.0730893170861856,0.164230914106418,0,0,0,0.137041924646751,0,0,0,0,0,0.39961921916426,0.144090417154106,0,0.514784993585894,0,0.124252535565433,0.471388069233591,0,0.104602846312333,0.203996435272644,0.288950589901519,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0.592713324460491,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.656740165994712,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0,0,0,0,0,3.16660755790329,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0.633936370075881,0.59996218756479,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0.218419276384028,0,0,0.495743057036009,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0.158013611732727,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0.67767649223376,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.218531143927391,0,0.101988829741982,0,0.0918948995348449,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0.248298857183432,0.112131862580613,0,0,0.217716747896961,0,0.0673520530145875,0,0,0.244209805832924,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0.641136984606466 | |||
|short_description=p@chr5:134241225..134241230,+ | |||
}} |
Revision as of 07:29, 22 January 2014
Short description: | p@chr5:134241225..134241230, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:134241225..134241230, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.43e-08 | 4 |
hemolymphoid system gland | 2.43e-08 | 4 |
thymic region | 2.43e-08 | 4 |
pharyngeal gland | 2.43e-08 | 4 |
thymus primordium | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.32e-09 | 51 |
immune system cancer | 2.32e-09 | 51 |
leukemia | 3.46e-07 | 39 |