FFCP PHASE1:Hg19::chr7:641637..641649,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C646 | |||
|description=CAGE_peak_at_chr7:641637..641649,+ | |||
|id=chr7:641637..641649,+ | |||
|ontology_enrichment_celltype=CL:0000557!1.92e-40!71;CL:0002057!3.79e-38!42;CL:0000839!1.70e-37!70;CL:0000988!6.42e-37!182;CL:0000766!9.48e-37!76;CL:0002009!3.21e-35!65;CL:0000763!6.03e-35!112;CL:0000049!6.03e-35!112;CL:0002032!7.91e-35!165;CL:0000837!7.91e-35!165;CL:0000860!9.95e-35!45;CL:0002031!4.99e-34!124;CL:0000037!1.84e-33!172;CL:0000566!1.84e-33!172;CL:0002194!4.14e-33!63;CL:0000576!4.14e-33!63;CL:0000040!4.14e-33!63;CL:0000559!4.14e-33!63;CL:0000738!1.25e-32!140;CL:0002087!4.23e-29!119;CL:0002320!9.00e-11!365;CL:0000134!2.01e-10!358;CL:0000219!3.05e-09!390;CL:0002274!3.96e-08!5;CL:0000457!3.96e-08!5;CL:0002191!3.96e-08!5;CL:0000097!3.96e-08!5;CL:0000831!3.96e-08!5;CL:0002028!3.96e-08!5;CL:0000048!2.81e-07!430;CL:0000723!7.23e-07!436;CL:0000034!9.49e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.95e-87;33!CL:0002057;8.95e-87;33!CL:0000473;3.32e-62;39!CL:0000234;3.32e-62;39!CL:0000576;1.64e-38;48!CL:0000766;8.41e-28;69!CL:0000763;2.36e-13;100!CL:0002087;2.36e-11;104!CL:0000097;3.81e-09;5!CL:0000738;2.99e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.28e-71,42;CL:0002057,1.28e-71,42;CL:0000473,1.03e-66,48;CL:0000234,1.03e-66,48;CL:0000557,1.20e-60,67;CL:0000839,1.18e-57,66;CL:0000766,6.90e-56,72;CL:0002009,5.07e-54,61;CL:0002194,4.83e-52,59;CL:0000576,4.83e-52,59;CL:0000040,4.83e-52,59;CL:0000559,4.83e-52,59;CL:0002031,8.42e-38,120;CL:0000763,1.71e-37,108;CL:0000049,1.71e-37,108;CL:0000738,8.17e-37,136;CL:0002087,3.96e-32,115;CL:0002032,6.81e-30,161;CL:0000837,6.81e-30,161;CL:0000037,2.54e-28,168;CL:0000988,1.76e-26,177;CL:0000134,4.86e-10,354;CL:0002320,1.10e-09,361;CL:0000219,3.39e-09,386;CL:0000097,3.71e-09,5;CL:0002028,3.71e-09,5;CL:0000034,1.83e-08,441;CL:0000048,2.71e-08,427;CL:0000723,4.63e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.92e-52;42!CL:0000049;1.32e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.19e-37!80;UBERON:0002193!1.40e-33!112;UBERON:0001474!3.32e-33!86;UBERON:0002390!7.83e-33!102;UBERON:0003061!7.83e-33!102;UBERON:0002405!2.75e-27!115;UBERON:0004765!7.61e-27!101;UBERON:0001434!7.61e-27!101;UBERON:0003081!2.02e-12!216;UBERON:0002204!7.27e-12!167;UBERON:0002384!2.73e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.06e-52,76;UBERON:0001474,2.33e-48,82;UBERON:0002405,1.15e-47,93;UBERON:0004765,1.84e-43,90;UBERON:0002193,4.68e-40,108;UBERON:0002390,2.35e-39,98;UBERON:0003061,2.35e-39,98;UBERON:0001434,1.98e-38,100;UBERON:0002204,3.58e-20,167;UBERON:0003081,1.36e-16,203;UBERON:0002384,3.31e-09,371;UBERON:0000926,4.18e-08,315;UBERON:0004120,4.18e-08,315;UBERON:0006603,4.18e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.305653622991805,0.903106483949403,1.10195093839151,0,0,1.23852898652861,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0.581592955118259,1.13362783106643,1.4555043671269,1.62700325833979,3.70051099219643,5.26500830521676,6.61692502340946,8.45330331546032,9.22280696565482,6.20542225325913,12.2642089880927,28.4395621848118,0.941211697713023,3.0019676506363,2.9214052977861,2.44867113896722,6.09765151444578,3.19668562899521,0.989553900560148,3.39088217956774,1.27867425159808,2.61188314765726,7.37600792098482,6.85104473895132,6.78371396193207,10.9511412868242,12.3797641481916,1.81619850790011,6.2607198117886,6.32924774881769,0,0.212604299965044,0,0.112328631146495,0.450530678524519,0,0,0,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0.382273228125229,1.32171328579026,0,0,0,0,0.411202997999018,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0.384273959177026,0.390178042679635,0.328875809207352,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.0892997282840798,0,0.337834441449967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15493158208859,1.85194205030644,0.380508304469197,0,0,0.246217006087397,0.468008530278475,0,0,0,0,0,0,0,0.985326475791887,0.176096868026452,10.9883901236609,8.93543711185161,17.6739406796932,0,0,0,0,0,1.50171528921959,0.571652865261156,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.336255431980582,0,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08454505380579,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67222857613147,0,0,0,0,0.191505370132367,0.211673582723883,0,0.561594356226918,0,0.156679895773023,0,0,0.1605880751037,0.201799707191048,0,0,0,0.223676107892416,0,0,0.556812347790485,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,11.2066634474197,0,0,0.276283915531148,0,0,0.738508832766417,0,0,0,0.511572370226872,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0.31396051279005,0,0,0,0.335643173951685,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0,0.889563386041866,0.123563938946503,0.313265848516366,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,2.32140586367385,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,0.314408610199332,0,0,0,0,0,1.08803560673895,0,0.306345576763462,0.655745261419609,0,0,0.244052529803926,0,0.573409195690071,0,0,0,0,9.85719264020711,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,1.07140367175657,0,0,0.227662191351298,0.0887023701626388,1.38280785066935,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:641637..641649,+ | |||
}} |
Revision as of 15:20, 22 January 2014
Short description: | p@chr7:641637..641649, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:641637..641649, + |
Coexpression cluster: | C646_CD14_Mast_vagina_thymus_MCF7_immature_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.28e-71 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-71 | 42 |
defensive cell | 1.03e-66 | 48 |
phagocyte | 1.03e-66 | 48 |
granulocyte monocyte progenitor cell | 1.20e-60 | 67 |
myeloid lineage restricted progenitor cell | 1.18e-57 | 66 |
myeloid leukocyte | 6.90e-56 | 72 |
macrophage dendritic cell progenitor | 5.07e-54 | 61 |
monopoietic cell | 4.83e-52 | 59 |
monocyte | 4.83e-52 | 59 |
monoblast | 4.83e-52 | 59 |
promonocyte | 4.83e-52 | 59 |
hematopoietic lineage restricted progenitor cell | 8.42e-38 | 120 |
myeloid cell | 1.71e-37 | 108 |
common myeloid progenitor | 1.71e-37 | 108 |
leukocyte | 8.17e-37 | 136 |
nongranular leukocyte | 3.96e-32 | 115 |
hematopoietic oligopotent progenitor cell | 6.81e-30 | 161 |
hematopoietic multipotent progenitor cell | 6.81e-30 | 161 |
hematopoietic stem cell | 2.54e-28 | 168 |
hematopoietic cell | 1.76e-26 | 177 |
mesenchymal cell | 4.86e-10 | 354 |
connective tissue cell | 1.10e-09 | 361 |
motile cell | 3.39e-09 | 386 |
mast cell | 3.71e-09 | 5 |
basophil mast progenitor cell | 3.71e-09 | 5 |
stem cell | 1.83e-08 | 441 |
multi fate stem cell | 2.71e-08 | 427 |
somatic stem cell | 4.63e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.06e-52 | 76 |
bone element | 2.33e-48 | 82 |
immune system | 1.15e-47 | 93 |
skeletal element | 1.84e-43 | 90 |
hemolymphoid system | 4.68e-40 | 108 |
hematopoietic system | 2.35e-39 | 98 |
blood island | 2.35e-39 | 98 |
skeletal system | 1.98e-38 | 100 |
musculoskeletal system | 3.58e-20 | 167 |
lateral plate mesoderm | 1.36e-16 | 203 |
connective tissue | 3.31e-09 | 371 |
mesoderm | 4.18e-08 | 315 |
mesoderm-derived structure | 4.18e-08 | 315 |
presumptive mesoderm | 4.18e-08 | 315 |