FFCP PHASE1:Hg19::chr7:14028693..14028704,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2115 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3490 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=23bp_to_ENST00000460438_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_12_at_ETV1_5end | |||
|id=chr7:14028693..14028704,- | |||
|ontology_enrichment_celltype=CL:0000540!7.79e-08!6;CL:0000031!7.79e-08!6;CL:0000404!7.79e-08!6;CL:0000047!9.86e-08!8;CL:0000133!2.36e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.99e-10;6!CL:0000404;1.99e-10;6!CL:0000047;1.50e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.02e-16,8;CL:0000540,1.81e-10,6;CL:0000031,1.81e-10,6;CL:0000404,1.81e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.48e-44;3!UBERON:0006222;2.21e-15;1!CL:0000031;1.99e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.14e-25!94;UBERON:0001016!1.14e-25!94;UBERON:0005743!1.16e-25!86;UBERON:0001017!3.40e-25!82;UBERON:0001049!3.75e-24!57;UBERON:0005068!3.75e-24!57;UBERON:0006241!3.75e-24!57;UBERON:0007135!3.75e-24!57;UBERON:0003075!2.02e-21!86;UBERON:0007284!2.02e-21!86;UBERON:0002780!1.04e-20!41;UBERON:0001890!1.04e-20!41;UBERON:0006240!1.04e-20!41;UBERON:0002616!2.83e-20!59;UBERON:0003080!5.80e-20!42;UBERON:0002346!1.01e-19!90;UBERON:0001893!1.55e-19!34;UBERON:0002791!1.49e-18!33;UBERON:0001869!4.67e-18!32;UBERON:0002020!5.32e-18!34;UBERON:0003528!5.32e-18!34;UBERON:0000955!6.63e-18!69;UBERON:0006238!6.63e-18!69;UBERON:0004121!7.23e-18!169;UBERON:0003056!2.24e-17!61;UBERON:0000033!3.76e-17!123;UBERON:0000153!5.80e-17!129;UBERON:0007811!5.80e-17!129;UBERON:0000924!6.14e-17!173;UBERON:0006601!6.14e-17!173;UBERON:0007023!9.93e-15!115;UBERON:0000956!5.19e-13!25;UBERON:0000203!5.19e-13!25;UBERON:0002619!4.67e-11!22;UBERON:0001950!8.33e-11!20;UBERON:0000481!3.80e-10!347;UBERON:0000477!1.40e-07!286;UBERON:0000475!1.65e-07!365;UBERON:0000025!6.07e-07!194;UBERON:0000922!6.32e-07!612;UBERON:0004111!7.13e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.97e-22;6!UBERON:0004733;1.63e-19;12!UBERON:0002028;1.63e-19;12!UBERON:0004732;4.83e-18;13!UBERON:0002680;3.51e-15;9!UBERON:0001895;3.51e-15;9!UBERON:0000073;1.42e-09;53!UBERON:0002616;1.42e-09;53!UBERON:0002771;2.40e-08;2!UBERON:0001016;1.81e-07;83!UBERON:0000955;9.72e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.97e-22,6;UBERON:0006215,1.97e-22,6;UBERON:0004733,1.67e-19,12;UBERON:0002028,1.67e-19,12;UBERON:0007277,1.67e-19,12;UBERON:0004732,4.94e-18,13;UBERON:0001017,3.89e-16,81;UBERON:0003076,1.13e-15,15;UBERON:0003057,1.13e-15,15;UBERON:0002680,3.52e-15,9;UBERON:0001895,3.52e-15,9;UBERON:0010092,3.52e-15,9;UBERON:0001016,1.85e-14,89;UBERON:0000073,2.01e-12,53;UBERON:0002616,2.01e-12,53;UBERON:0001049,9.61e-12,56;UBERON:0005068,9.61e-12,56;UBERON:0006241,9.61e-12,56;UBERON:0007135,9.61e-12,56;UBERON:0000955,1.82e-09,68;UBERON:0006238,1.82e-09,68;UBERON:0004121,1.01e-08,171;UBERON:0000924,1.01e-08,171;UBERON:0006601,1.01e-08,171;UBERON:0002771,2.87e-08,2;UBERON:0010371,6.01e-08,104;UBERON:0003075,6.74e-08,82;UBERON:0007284,6.74e-08,82;UBERON:0011216,9.68e-08,223;UBERON:0002346,1.65e-07,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0.572471974262113,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.161872944368132,0.280901613404497,0,0.491337269247072,0.413303124703062,0,0.247266929278557,0,0,0,0.500474079487857,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.132529768321485,0.232387885739037,0.414644220061482,0.504641701751257,0.36497735907583,0,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,1.71072446022705,0.205654985406647,0,0,0.224262168690721,0,0.22001485746285,0.258543431515556,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,3.55732473911449,0,1.54657762555539,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0,0.542530047399471,0,0,0,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.410635780069046,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0,0.214840489736547,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.562677665642051,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.60298219312704,18.30980835805,24.4380164448006,5.91095237907095,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,1.1713222286267,0,0.19566461893209,0.242780379534093,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0.213452994739353,0,0.144090417154106,0,0.171594997861965,0,0.248505071130865,0,0,0.104602846312333,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.470284307407084,0,0,0,0,0,0.0984274815147488,0,0,0.681017030557878,0.321506296930038,0.275078873194468,2.49264202817511,0,0,0.303747783290123,0,0.157611414598396,0.104909176269996,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0.427149650270779,1.72924735609633,0.828478110694391,0,0,0,0,0,0,0,0,0,0,1.22026264901963,0.250381861413,0,1.33114861844223,0.310482014706917,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.189403005275089,0,0,0.457680136793847,0.302461847526478,0.15543720058278,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0,0,0,0.552317850755522,0,0,0,0.215649622793364,0,0.109209638192014,0,0,0,0,0,0,0,0.352675943690684,0,0.642292250964595,0,0.159633859057151,0.205116364240755,0.252071696221718,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.540300676947157,0,0.206686796501184,0.634158101939068,2.18789923607288,0.548257766857182,0,0,0,0,0.336283722218824,0,0.455324382702595,0,0,0.342976018874837,0.543757863814654,0.328863867814245,0,0,0,0.942693539496011,0,0,0,0,0,0,0,0.173858272302579,0,0,0.17071847709395,0,0,0.591660003652827,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0.118920090777569,0,0,0,0,0.218559560503957,0.470317296361523,0,0.235676547101626,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0.917458566809082,0.286679166302903,0,0.271965960763659,1.30905207102113,0,0.371995018166751,0,0,0.126166424835079,0.218531143927391,0.126698501011437,0.407955318967927,0,0.18378979906969,0.752122617877125,0,0,0,0.20686599172379,0,0.23806443146374,0,0.124149428591716,0,0.12729431655633,0.202117188958219,0.217716747896961,0,0,0,0,0,0.213454691755431,0,0.0898252021065869,0,0,0.813792356631477,0,0,0 | |||
|short_description=p12@ETV1 | |||
}} |
Revision as of 15:46, 22 January 2014
Short description: | p12@ETV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ETV1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 23bp_to_ENST00000460438_5end |
EntrezGene: | ETV1 |
HGNC: | 3490 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.02e-16 | 8 |
neuron | 1.81e-10 | 6 |
neuroblast | 1.81e-10 | 6 |
electrically signaling cell | 1.81e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.97e-22 | 6 |
rhombic lip | 1.97e-22 | 6 |
segmental subdivision of hindbrain | 1.67e-19 | 12 |
hindbrain | 1.67e-19 | 12 |
presumptive hindbrain | 1.67e-19 | 12 |
segmental subdivision of nervous system | 4.94e-18 | 13 |
central nervous system | 3.89e-16 | 81 |
posterior neural tube | 1.13e-15 | 15 |
chordal neural plate | 1.13e-15 | 15 |
regional part of metencephalon | 3.52e-15 | 9 |
metencephalon | 3.52e-15 | 9 |
future metencephalon | 3.52e-15 | 9 |
nervous system | 1.85e-14 | 89 |
regional part of nervous system | 2.01e-12 | 53 |
regional part of brain | 2.01e-12 | 53 |
neural tube | 9.61e-12 | 56 |
neural rod | 9.61e-12 | 56 |
future spinal cord | 9.61e-12 | 56 |
neural keel | 9.61e-12 | 56 |
brain | 1.82e-09 | 68 |
future brain | 1.82e-09 | 68 |
ectoderm-derived structure | 1.01e-08 | 171 |
ectoderm | 1.01e-08 | 171 |
presumptive ectoderm | 1.01e-08 | 171 |
middle temporal gyrus | 2.87e-08 | 2 |
ecto-epithelium | 6.01e-08 | 104 |
neural plate | 6.74e-08 | 82 |
presumptive neural plate | 6.74e-08 | 82 |
organ system subdivision | 9.68e-08 | 223 |
neurectoderm | 1.65e-07 | 86 |