FFCP PHASE1:Hg19::chr8:32471928..32471946,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3084 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7997 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=35bp_to_ENST00000522569_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_4_at_NRG1_5end | |||
|id=chr8:32471928..32471946,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.14e-66!42;CL:0000860!2.61e-61!45;CL:0002194!2.57e-43!63;CL:0000576!2.57e-43!63;CL:0000040!2.57e-43!63;CL:0000559!2.57e-43!63;CL:0002009!1.39e-41!65;CL:0000766!6.66e-40!76;CL:0000839!1.10e-37!70;CL:0000557!5.69e-37!71;CL:0002087!4.08e-35!119;CL:0000738!5.59e-33!140;CL:0002031!1.29e-28!124;CL:0000037!1.34e-23!172;CL:0000566!1.34e-23!172;CL:0000763!1.15e-22!112;CL:0000049!1.15e-22!112;CL:0000988!2.30e-21!182;CL:0002032!6.79e-21!165;CL:0000837!6.79e-21!165;CL:0002393!2.11e-07!9;CL:0002397!2.11e-07!9;CL:0000767!7.67e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.10e-86;33!CL:0002057;4.10e-86;33!CL:0000473;1.48e-59;39!CL:0000234;1.48e-59;39!CL:0000576;2.39e-55;48!CL:0000766;2.45e-32;69!CL:0002087;1.12e-20;104!CL:0002393;7.68e-17;6!CL:0002397;7.68e-17;6!CL:0000763;2.13e-14;100!CL:0000738;4.31e-11;136!CL:0000767;1.29e-09;3!CL:0000226;5.45e-09;3!CL:0000842;5.45e-09;3!CL:0000988;2.22e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.21e-102,42;CL:0002057,3.21e-102,42;CL:0000473,4.58e-88,48;CL:0000234,4.58e-88,48;CL:0002194,2.96e-68,59;CL:0000576,2.96e-68,59;CL:0000040,2.96e-68,59;CL:0000559,2.96e-68,59;CL:0002009,1.06e-65,61;CL:0000766,9.00e-64,72;CL:0000839,5.59e-60,66;CL:0000557,6.17e-59,67;CL:0002087,3.47e-52,115;CL:0000738,1.29e-48,136;CL:0002031,5.64e-43,120;CL:0000763,6.56e-39,108;CL:0000049,6.56e-39,108;CL:0000037,6.77e-37,168;CL:0000988,2.32e-34,177;CL:0002032,6.13e-34,161;CL:0000837,6.13e-34,161;CL:0000134,1.83e-11,354;CL:0002393,5.27e-11,9;CL:0002397,5.27e-11,9;CL:0002320,5.37e-11,361;CL:0000767,1.24e-09,3;CL:0000219,2.36e-09,386;CL:0000226,5.85e-09,3;CL:0000842,5.85e-09,3;CL:0000034,8.31e-08,441;CL:0000048,2.26e-07,427;CL:0000723,4.22e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-73;42!CL:0000049;2.29e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.77e-48!102;UBERON:0003061!3.77e-48!102;UBERON:0002193!7.56e-46!112;UBERON:0002371!2.35e-31!80;UBERON:0001474!2.86e-28!86;UBERON:0002405!5.44e-25!115;UBERON:0004765!2.09e-23!101;UBERON:0001434!2.09e-23!101;UBERON:0003081!8.57e-18!216;UBERON:0000178!5.97e-16!15;UBERON:0000179!5.97e-16!15;UBERON:0000463!5.97e-16!15;UBERON:0002204!4.86e-10!167;UBERON:0007023!3.17e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.84e-20;15!UBERON:0000179;1.84e-20;15!UBERON:0000463;1.84e-20;15!UBERON:0002390;2.36e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.38e-67,98;UBERON:0003061,3.38e-67,98;UBERON:0002193,1.89e-62,108;UBERON:0002371,9.01e-51,76;UBERON:0001474,2.58e-46,82;UBERON:0002405,3.45e-44,93;UBERON:0004765,2.73e-41,90;UBERON:0001434,3.92e-36,100;UBERON:0003081,3.15e-27,203;UBERON:0000178,1.90e-20,15;UBERON:0000179,1.90e-20,15;UBERON:0000463,1.90e-20,15;UBERON:0002204,1.57e-17,167;UBERON:0000926,8.34e-14,315;UBERON:0004120,8.34e-14,315;UBERON:0006603,8.34e-14,315;UBERON:0002384,2.33e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8814852887474,3.83829398097213,31.4276730331634,0,0,0,0,0,0,18.281848481552,16.2441002450815,17.1438587865523,0,0,0,34.0231878744181,34.3867108756817,8.00527401919793,32.0752070929845,34.1269347058115,8.981484755958,26.4677000936378,36.1186596206032,10.4052181150977,46.8854125801801,47.1203819016193,20.3139729891513,34.4483481362967,28.382239606016,10.7867272533641,37.0361509768792,38.5114832491312,8.31138263538754,29.6866170168045,36.9007766600019,9.37694451171927,33.9544809195443,23.2627942123367,9.9651559839292,35.4260618012008,37.5467701262545,11.5110087693712,35.1131711527354,36.0912083267813,14.8737322097216,1.69004229049553,3.61427309940574,3.35453832813401,50.2108981224833,43.4011220311953,13.5009492825547,0,0,0,1.75996244461323,0.546138611262131,0,1.70692089026603,0,0.574752439954483,0,0,0,0,0,1.32171328579026,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6563263098555,1.53583933385302,1.24930726552346,1.4206635122641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.715471872916026,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,0.215627574859517,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,10.5699958401122,5.44310544797566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,1.52927441428475,3.98753031021914,10.7204298956005,16.4544909234478,3.24236655596359,5.94034580961926,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,1.78178808499583,0,0,0,0,0,0,0,1.93398740871803,0,0,0,0,0,0,0,0.0986434056369336,11.974154617347,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,1.28144895081234,0,2.07119527673598,2.97699613087171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0.33946505990805,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.193766729508018,0.496597714366863,0,0.0636471582781649,0,0.217716747896961,0,0.5388164241167,1.36272190246085,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p4@NRG1 | |||
}} |
Revision as of 21:36, 22 January 2014
Short description: | p4@NRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NRG1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 35bp_to_ENST00000522569_5end |
EntrezGene: | NRG1 |
HGNC: | 7997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.38e-67 | 98 |
blood island | 3.38e-67 | 98 |
hemolymphoid system | 1.89e-62 | 108 |
bone marrow | 9.01e-51 | 76 |
bone element | 2.58e-46 | 82 |
immune system | 3.45e-44 | 93 |
skeletal element | 2.73e-41 | 90 |
skeletal system | 3.92e-36 | 100 |
lateral plate mesoderm | 3.15e-27 | 203 |
blood | 1.90e-20 | 15 |
haemolymphatic fluid | 1.90e-20 | 15 |
organism substance | 1.90e-20 | 15 |
musculoskeletal system | 1.57e-17 | 167 |
mesoderm | 8.34e-14 | 315 |
mesoderm-derived structure | 8.34e-14 | 315 |
presumptive mesoderm | 8.34e-14 | 315 |
connective tissue | 2.33e-10 | 371 |