FFCP PHASE1:Hg19::chr8:96146168..96146183,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79666 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20757 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-120bp_to_ENST00000519516_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_PLEKHF2_5end | |||
|id=chr8:96146168..96146183,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.03e-29!172;CL:0000566!3.03e-29!172;CL:0000763!1.36e-28!112;CL:0000049!1.36e-28!112;CL:0002032!1.81e-28!165;CL:0000837!1.81e-28!165;CL:0000988!1.37e-26!182;CL:0000738!2.84e-22!140;CL:0000766!8.84e-20!76;CL:0000557!5.09e-19!71;CL:0002031!7.35e-19!124;CL:0000839!9.77e-19!70;CL:0002009!3.81e-16!65;CL:0002087!1.36e-15!119;CL:0002194!3.25e-15!63;CL:0000576!3.25e-15!63;CL:0000040!3.25e-15!63;CL:0000559!3.25e-15!63;CL:0000860!7.13e-15!45;CL:0002057!2.22e-14!42;CL:0000945!8.06e-10!24;CL:0000826!8.06e-10!24;CL:0000063!2.38e-08!578;CL:0000236!4.28e-08!14;CL:0000223!1.25e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.50e-17;33!CL:0002057;1.50e-17;33!CL:0000473;3.46e-15;39!CL:0000234;3.46e-15;39!CL:0000945;1.93e-11;24!CL:0000576;6.48e-11;48!CL:0000236;2.23e-10;13!CL:0000763;2.05e-09;100!CL:0000766;3.79e-09;69!CL:0000738;2.88e-08;136!CL:0000451;7.48e-08;10!CL:0000990;2.35e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,3.12e-34,161;CL:0000837,3.12e-34,161;CL:0000037,5.27e-34,168;CL:0000763,1.84e-33,108;CL:0000049,1.84e-33,108;CL:0000988,2.48e-31,177;CL:0000738,1.10e-26,136;CL:0002031,6.95e-24,120;CL:0000557,1.44e-23,67;CL:0000766,2.57e-23,72;CL:0000839,3.62e-23,66;CL:0002009,1.48e-19,61;CL:0002087,7.30e-19,115;CL:0002194,2.91e-18,59;CL:0000576,2.91e-18,59;CL:0000040,2.91e-18,59;CL:0000559,2.91e-18,59;CL:0000473,3.58e-17,48;CL:0000234,3.58e-17,48;CL:0000860,1.71e-16,42;CL:0002057,1.71e-16,42;CL:0000945,1.44e-11,24;CL:0000826,1.44e-11,24;CL:0000236,6.50e-11,14;CL:0000451,1.51e-07,10;CL:0000990,2.38e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.27e-12;42!CL:0000049;8.77e-09;108 | |||
|ontology_enrichment_disease=DOID:305!1.74e-09!106;DOID:162!2.33e-08!235;DOID:14566!5.12e-08!239;DOID:0050686!3.04e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.53e-16!102;UBERON:0003061!2.53e-16!102;UBERON:0002193!3.96e-15!112;UBERON:0001474!1.24e-14!86;UBERON:0002371!1.34e-14!80;UBERON:0002405!1.64e-12!115;UBERON:0004765!3.66e-11!101;UBERON:0001434!3.66e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.59e-19,76;UBERON:0001474,1.39e-18,82;UBERON:0002390,1.69e-18,98;UBERON:0003061,1.69e-18,98;UBERON:0004765,7.84e-18,90;UBERON:0002193,8.14e-17,108;UBERON:0002405,1.25e-15,93;UBERON:0001434,4.94e-14,100 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.737201809504527,0,1.09220686065086,0.791300934685361,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0.123121058076788,0.204000691244253,0,0,0.410623275218653,0.125542639594803,1.22261449196722,1.72411237844886,0.787107813136792,1.96682138424452,0.383829398097213,0.464448369948228,0,0.6024118375565,0.369754010166788,2.55641761914995,2.84338464974843,0.587200878669695,1.66198622559563,9.82667792603694,0.651032612147555,2.91090116511902,4.21061765824673,2.31818010870768,1.01778767145695,2.64513160582167,1.21292030593908,2.09186133215116,3.28934310417461,2.16794459626573,2.8769239232215,2.0492856522328,2.36482229888585,5.17118521104928,9.68227025375739,0,1.31769637679823,2.18324920046277,3.82029923556644,4.28517449319264,5.45579346029359,7.03270838378945,1.9791078011203,2.39356389145958,2.55734850319616,28.7307146242298,27.2344907851747,25.5357122088186,2.76373531782418,2.08593167368081,3.04064382587163,22.3997815974346,35.7229306907938,43.3553470794012,1.26753171787165,0.637812899895131,1.25795187305026,0.898629049171961,0.600707571366025,1.28580469357664,0.855038231223746,0.19891667719909,0.547992461293902,7.03984977845291,6.00752472388345,9.7846017924991,3.41384178053206,6.4063357925762,6.32227683949932,7.93253847341835,8.58648379081828,2.84606484554724,1.76171156811282,1.14681968437569,0,3.92355994087075,0.526768169550154,0.196709770113833,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0.589211814949674,0,0.270803863765016,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0.383959833463255,0,0,0,0.403213486449465,0,0.434473211648397,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.189069634328136,0,0.087834785693126,3.1434978119451,0.364295288292542,1.11235332835329,1.62273696827342,3.30846500868608,2.79211717089617,2.14641561874808,1.14398982156026,1.11437250398869,0.198762407366705,1.72046919021225,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0.775250277507987,1.06729878806013,2.00832367658802,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0,0.563057402416611,1.53316637465883,1.89853131913626,0.549605231791222,3.9534125230819,7.75560528296651,0,0,0.506522046658319,0,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.490385709340376,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.368502951935304,0,0,0.247266929278557,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0.567160915800105,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.201504196455281,0.169560592310488,1.73934767846967,1.63647672354501,1.72082757233402,0.731842236777572,1.45782745153634,1.16193942869518,1.14027160516907,1.7662459561294,0.36497735907583,0,0,0,0,0,0.354920400119532,0.674338760312407,0.964044119533928,0.882351781859152,1.30727666455444,1.18635309555548,0.404493924480493,0.196221465125346,0.38474715694639,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0.982827216677626,4.13552934676983,0.441463099414651,2.58275720940538,0.514703430895577,1.75600456653801,1.1240175325762,0.904760751704678,0.925884451585296,0,1.03993478527958,0,0.231860809950154,0.352226082707465,0.144366447761074,0,0.380508304469197,1.58040879591855,0.858486162094873,1.47730203652438,2.10603838625314,2.0808362720422,1.87467667973554,3.35964256397719,1.84307626415102,3.85101647622248,2.3250715081117,1.15014803749563,4.92663237895944,2.90559832243646,4.76854665743776,6.62951785718023,3.40854570251226,1.0159663086747,0,0,0,0.719792448923265,0.901029173531752,1.14330573052231,0.224262168690721,0,0.2933531432838,1.03417372606222,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,1.30294473717494,0,0,0,0.871533458600294,0.199945982364114,0,2.51128545716063,0,0.239624855491583,0,0,0,0.205476322550383,0.716243852959582,0.336255431980582,1.18218456121156,0,0.385029108839245,0.508189248444927,0,0,0,0,0.749007023947182,5.9832291840805,1.65766205374414,0.12269149171914,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,1.24060815673732,0.862856803274467,1.06727557803444,1.21251028578504,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0.519254429183621,0.116210378459959,2.29632954224082,1.60405176242628,1.38121483403844,0.229628896329213,0.546273504020151,0.131124414959424,0,0.770153371044148,0,0,0.316654886678627,1.13733384070897,0.510281115829547,0.215915916102139,0,0,0,1.01950509218015,0,1.11937377361089,2.19259876645935,3.13722541229881,0.256450125116389,0.656029291399411,0.325378394664303,2.36994326789761,1.00726411300178,1.15513299888823,0.574265537996172,0.650060246036521,0,0,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0,0.356128142586949,1.65284915360978,2.30628080838127,1.91419068741876,1.92199783625545,0,0.31481234683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| |||
|short_description=p5@PLEKHF2 | |||
}} |
Revision as of 22:57, 22 January 2014
Short description: | p5@PLEKHF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PLEKHF2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -120bp_to_ENST00000519516_5end |
EntrezGene: | PLEKHF2 |
HGNC: | 20757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 3.12e-34 | 161 |
hematopoietic multipotent progenitor cell | 3.12e-34 | 161 |
hematopoietic stem cell | 5.27e-34 | 168 |
myeloid cell | 1.84e-33 | 108 |
common myeloid progenitor | 1.84e-33 | 108 |
hematopoietic cell | 2.48e-31 | 177 |
leukocyte | 1.10e-26 | 136 |
hematopoietic lineage restricted progenitor cell | 6.95e-24 | 120 |
granulocyte monocyte progenitor cell | 1.44e-23 | 67 |
myeloid leukocyte | 2.57e-23 | 72 |
myeloid lineage restricted progenitor cell | 3.62e-23 | 66 |
macrophage dendritic cell progenitor | 1.48e-19 | 61 |
nongranular leukocyte | 7.30e-19 | 115 |
monopoietic cell | 2.91e-18 | 59 |
monocyte | 2.91e-18 | 59 |
monoblast | 2.91e-18 | 59 |
promonocyte | 2.91e-18 | 59 |
defensive cell | 3.58e-17 | 48 |
phagocyte | 3.58e-17 | 48 |
classical monocyte | 1.71e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.71e-16 | 42 |
lymphocyte of B lineage | 1.44e-11 | 24 |
pro-B cell | 1.44e-11 | 24 |
B cell | 6.50e-11 | 14 |
dendritic cell | 1.51e-07 | 10 |
conventional dendritic cell | 2.38e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.59e-19 | 76 |
bone element | 1.39e-18 | 82 |
hematopoietic system | 1.69e-18 | 98 |
blood island | 1.69e-18 | 98 |
skeletal element | 7.84e-18 | 90 |
hemolymphoid system | 8.14e-17 | 108 |
immune system | 1.25e-15 | 93 |
skeletal system | 4.94e-14 | 100 |