FFCP PHASE1:Hg19::chr9:75780046..75780104,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C827 | |||
|description=CAGE_peak_at_chr9:75780046..75780104,+ | |||
|id=chr9:75780046..75780104,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.73e-21!42;CL:0000860!1.37e-19!45;CL:0000557!4.73e-16!71;CL:0000766!5.73e-16!76;CL:0000839!1.25e-14!70;CL:0002009!2.10e-14!65;CL:0002194!1.14e-13!63;CL:0000576!1.14e-13!63;CL:0000040!1.14e-13!63;CL:0000559!1.14e-13!63;CL:0000048!1.63e-10!430;CL:0000723!3.43e-10!436;CL:0000034!1.08e-09!444;CL:0000134!1.01e-08!358;CL:0002320!1.45e-08!365;CL:0000012!3.65e-08!682;CL:0000548!6.93e-08!679;CL:0000004!6.93e-08!679;CL:0000255!6.93e-08!679;CL:0002371!9.25e-08!591;CL:0000144!1.03e-07!625;CL:0000063!2.76e-07!578;CL:0000763!7.36e-07!112;CL:0000049!7.36e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.82e-26;33!CL:0002057;6.82e-26;33!CL:0000473;1.74e-18;39!CL:0000234;1.74e-18;39!CL:0000576;1.38e-13;48!CL:0000766;5.97e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.36e-26,42;CL:0002057,4.36e-26,42;CL:0000473,2.43e-23,48;CL:0000234,2.43e-23,48;CL:0000557,3.37e-20,67;CL:0000766,2.11e-19,72;CL:0000839,1.27e-18,66;CL:0002009,1.04e-17,61;CL:0002194,9.52e-17,59;CL:0000576,9.52e-17,59;CL:0000040,9.52e-17,59;CL:0000559,9.52e-17,59;CL:0000048,1.02e-11,427;CL:0000723,1.61e-11,433;CL:0000134,3.31e-11,354;CL:0000034,3.43e-11,441;CL:0002320,1.08e-10,361;CL:0000763,9.26e-09,108;CL:0000049,9.26e-09,108;CL:0000219,2.83e-08,386;CL:0002031,9.17e-08,120;CL:0000738,7.10e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.83e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.22e-15!80;UBERON:0002204!4.78e-15!167;UBERON:0004765!1.40e-14!101;UBERON:0001434!1.40e-14!101;UBERON:0001474!2.04e-14!86;UBERON:0002390!3.57e-09!102;UBERON:0003061!3.57e-09!102;UBERON:0002193!2.22e-08!112;UBERON:0000926!2.58e-08!448;UBERON:0004120!2.58e-08!448;UBERON:0006603!2.58e-08!448;UBERON:0002384!3.22e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.89e-20,76;UBERON:0004765,1.00e-18,90;UBERON:0001474,1.86e-18,82;UBERON:0001434,1.40e-16,100;UBERON:0002405,2.66e-14,93;UBERON:0002204,1.44e-13,167;UBERON:0002390,1.80e-12,98;UBERON:0003061,1.80e-12,98;UBERON:0002193,4.40e-11,108;UBERON:0002384,1.28e-10,371;UBERON:0003081,1.87e-08,203;UBERON:0000926,2.68e-08,315;UBERON:0004120,2.68e-08,315;UBERON:0006603,2.68e-08,315 | |||
|phase1_expression=2.36181893051724,3.42560838225573,2.25527046553554,2.00146596706261,0.893922188854576,0,0,2.52687949370732,0,0,0,0,0,0.37129905888014,0.994192127183747,4.03395087871065,1.80808358407193,5.11217063271161,1.46379839637152,0.369363174230364,0,0,0.572471974262113,1.36874425072884,0.251085279189606,0.0764134057479513,0,0.0787107813136792,0.786728553697808,2.68680578668049,2.32224184974114,0.919421224478927,0,0.369754010166788,0,0,0.587200878669695,1.10799081706375,2.00544447470142,2.60413044859022,0.223915474239924,0,0.77272670290256,10.7594696696878,4.91238726795452,6.0646015296954,12.551167992907,6.57868620834921,4.64559556342655,8.63077176966451,7.42866048934392,13.4794871036494,17.2372840368309,9.68227025375739,4.06279459783025,15.247629502951,8.18718450173537,11.6856211911444,12.8555234795779,13.1580901101198,15.344091019177,5.93732340336089,8.37747362010854,9.37694451171927,10.7377418292576,3.40431134814684,6.22822248995575,15.8286659111748,13.037072960505,11.2938199246661,10.8971910474006,6.2607198117886,16.7725065343669,1.26753171787165,1.70083439972035,1.67726916406701,2.13424399178341,3.45406853535464,1.44653028027372,0.285012743741249,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0,0.587237189370939,0,3.96513985737078,0,1.31692042387539,1.180258620683,2.75107533924415,2.67281948699362,0,0,0,0,0.445641827540694,0,0.886135578334485,0.812411591295047,0,0.130059347559878,1.47994114143309,1.10540007114339,0,0.741432815810302,0.267540828089713,0,0.453237370790265,0.766440987203842,0.68725489096526,2.27717722817553,0.637130828648193,1.30216690771284,0,1.05402583354441,0.383959833463255,1.24930726552346,1.18388626022008,0.821127996921047,1.00803371612366,2.94184215361858,1.30341963494519,0,1.34140171940727,0.255725123687061,2.1686349143074,0,0.869079113764942,0,0,1.41802225746102,1.55210578223795,1.49319135678314,0.0654895377488563,0,0.741568885568859,0.97364218096405,0.870648686496336,1.46253756570752,0.238490624305342,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,0,1.29208379584664,0,1.33888245105868,0,0,0.24406205754817,0.735326160691737,0,0.982297011124877,0.673588117878509,0.563057402416611,0,0,0,1.31780417436063,0,0,5.4666914686485,1.77282716330412,2.38336525463794,2.0078563452417,1.06400514659507,1.68203280042692,0,1.2333377420858,1.24484414159907,0.942974704487816,0.653847612453835,0,1.72852777344,0,0.624320153660641,0.570471821544449,1.49448680551801,0.469737994575059,0.161872944368132,0.842704840213491,0.816616685019573,0.368502951935304,0.206651562351531,0,0.989067717114227,0,0,0.505008341862199,0.500474079487857,0.831192346452549,0.877955241761676,1.5324389789951,0.45071417671979,1.24775401476023,2.51145489964407,1.92201649936711,0.847727604638247,1.50045548042201,0.92747276314595,3.34932702059318,0.37223371266318,2.53164498361899,1.55899208257918,2.77677151668526,0.460249493211497,1.2931684545505,2.4850671476163,2.01504196455281,1.01736355386293,4.05847791642923,1.90922284413584,2.58124135850103,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,1.56449532329816,1.92972281457866,0,2.78620756819187,1.44375896333917,0.591534000199219,0.674338760312407,0,0.330881918197182,1.08939722046203,0,0.943819157121151,0.392442930250692,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0,1.54411029268673,1.09750285408626,0,1.70899253099772,0.740707561268237,0.325808305310325,0,1.44331342025273,0.463721619900307,0.469634776943287,0.866198686566443,2.31492756288305,0.761016608938393,0,0,0,1.63802985597466,0.297262324577456,3.74935335947108,2.35174979478403,2.26840155587818,1.07470227243418,0.871901815541886,0,3.94130590316755,1.76096868026452,9.12243708379397,7.63835753109896,4.92345490362882,0,0,0,0,0.616964956219941,0.300343057843917,0,0.224262168690721,0,1.39342743059805,1.29271715757778,0,1.690605505112,0.797814349754612,2.08014873822732,0,1.41849132023278,0,0.428933980974443,0,0,1.30294473717494,0,0.791951872933429,0.602878754119172,0.871533458600294,1.29964888536674,0,0.502257091432126,8.43335757932127,1.19812427745791,0,1.42636905040718,3.18518874668674,1.43833425785268,1.25342674267927,0.112085143993527,0.394061520403854,0.431255149719035,1.41177339907723,0.508189248444927,0,0,0.167516265334349,3.18969375826582,0.749007023947182,5.9832291840805,0,0.12269149171914,1.00034104211935,1.08506009479894,2.28767947683888,4.63915370872621,2.05013139544115,1.05427273493442,0.300946099727719,0,1.03473071292505,0.664225598535437,0.184369168541703,1.65078867489357,0,0.343143423810856,0.413536052245775,1.07857100409308,0.426910231213777,0.303127571446259,0,0.604780586659361,0.744323423456331,2.30192959932094,0.841980283299221,2.30650468660262,1.53512174720011,2.41280881715411,0,1.69630663182921,1.06537035187876,1.23190734020714,2.59627214591811,1.74315567689939,0,1.00253235151642,4.14364450211533,0.803701137152247,0.728364672026868,0.917870904715969,0,0.462092022626489,0,0,0.316654886678627,0,0,2.15915916102139,0,0.270946437543853,0.501689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| |||
|short_description=p@chr9:75780046..75780104,+ | |||
}} |
Revision as of 01:45, 23 January 2014
Short description: | p@chr9:75780046..75780104, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:75780046..75780104, + |
Coexpression cluster: | C827_CD14_throat_tongue_chorionic_esophagus_endometrioid_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.36e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.36e-26 | 42 |
defensive cell | 2.43e-23 | 48 |
phagocyte | 2.43e-23 | 48 |
granulocyte monocyte progenitor cell | 3.37e-20 | 67 |
myeloid leukocyte | 2.11e-19 | 72 |
myeloid lineage restricted progenitor cell | 1.27e-18 | 66 |
macrophage dendritic cell progenitor | 1.04e-17 | 61 |
monopoietic cell | 9.52e-17 | 59 |
monocyte | 9.52e-17 | 59 |
monoblast | 9.52e-17 | 59 |
promonocyte | 9.52e-17 | 59 |
multi fate stem cell | 1.02e-11 | 427 |
somatic stem cell | 1.61e-11 | 433 |
mesenchymal cell | 3.31e-11 | 354 |
stem cell | 3.43e-11 | 441 |
connective tissue cell | 1.08e-10 | 361 |
myeloid cell | 9.26e-09 | 108 |
common myeloid progenitor | 9.26e-09 | 108 |
motile cell | 2.83e-08 | 386 |
hematopoietic lineage restricted progenitor cell | 9.17e-08 | 120 |
leukocyte | 7.10e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.89e-20 | 76 |
skeletal element | 1.00e-18 | 90 |
bone element | 1.86e-18 | 82 |
skeletal system | 1.40e-16 | 100 |
immune system | 2.66e-14 | 93 |
musculoskeletal system | 1.44e-13 | 167 |
hematopoietic system | 1.80e-12 | 98 |
blood island | 1.80e-12 | 98 |
hemolymphoid system | 4.40e-11 | 108 |
connective tissue | 1.28e-10 | 371 |
lateral plate mesoderm | 1.87e-08 | 203 |
mesoderm | 2.68e-08 | 315 |
mesoderm-derived structure | 2.68e-08 | 315 |
presumptive mesoderm | 2.68e-08 | 315 |