FFCP PHASE1:Hg19::chr9:136217312..136217315,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=26815 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10163 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000362874,NR_002448,uc010naj.2_5end | |||
|coexpression_cluster_id=C229 | |||
|description=CAGE_peak_1_at_SNORD36A_5end | |||
|id=chr9:136217312..136217315,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.79e-07!679;CL:0000004!2.79e-07!679;CL:0000255!2.79e-07!679;CL:0000012!7.25e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000081;3.57e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000081,3.36e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.71e-11!235;DOID:14566!1.44e-10!239;DOID:0050687!8.18e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3119;2.58e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.92e-09,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;5.70e-13;10!UBERON:0000478;3.70e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.59e-13,10;UBERON:0000358,4.59e-13,10;UBERON:0000307,4.59e-13,10;UBERON:0000091,4.59e-13,10;UBERON:0000087,4.59e-13,10;UBERON:0007010,4.59e-13,10;UBERON:0007806,4.59e-13,10;UBERON:0008780,4.59e-13,10;UBERON:0005728,4.59e-13,10;UBERON:0000478,2.84e-08,24 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0.872338524100369,2.53299878168311,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0,0.229240217243854,0.492603536699674,0.0787107813136792,0,0.383829398097213,0.309632246632152,0,0,0,0.46480320348181,0.568676929949686,0,0.553995408531877,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0,0,0.580418477257168,0,0,0.502497330513487,0.521482918420201,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0.32145117339416,0,0.19891667719909,0,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0.950452044448374,0.602300476311091,0.127986611154418,0,0,0,0.403213486449465,0,0.289648807765598,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.527008714158756,0.0654895377488563,0,0.370784442784429,0,0,0,0,0.571994910780128,0,0.39752481473341,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0,0,0,0.760272105718513,0,0.367663080345869,0,0.0892997282840798,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0.12663051166458,0.794455084879313,1.43418310374407,0,0,1.06748995729705,0,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.368502951935304,0,0,0,0,0,0.505008341862199,0,0,0,0.30648779579902,0,0.340296549480063,0.717558542755448,0.213557388818567,0,1.20036438433761,0.412210116953756,0,0,0.337552664482532,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.339121184620975,0,0,0,0.365921118388786,0.265059536642971,0,0.310983165046111,0,1.09493207722749,1.56449532329816,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0,0,1.26755034821831,0,0,0.882926198829301,0.245976877086227,0.514703430895577,0.109750285408626,0,0.201057944823262,0.277765335475589,0,0,1.44331342025273,0.115930404975077,0.234817388471643,0.144366447761074,0,0,1.58040879591855,0.858486162094873,0.246217006087397,0,0,0,0,0.141775097242386,0.179117045405697,0.581267877027924,0,0,0,0,0.288239906833923,0,0.126995788584338,0,0,0,0.205654985406647,0.300343057843917,0.571652865261156,0,0,0,0,0,37.193321112464,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,1.58390374586686,0,0,0,0,0.502257091432126,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0.167516265334349,0.637938751653163,0,2.99161459204025,0.414415513436035,0.12269149171914,0,0,0,0,0.315404830067869,0,0.300946099727719,0,0,0.664225598535437,0,0.260650843404249,0,0,0,0.215714200818617,0.106727557803444,0.303127571446259,1.66435439510497,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.241718899183244,0,0.0920809889358963,0,0.546273504020151,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,2.27466768141793,0.170093705276516,0.215915916102139,0,0.541892875087706,0,0.254876273045038,0,0,0,0.522870902049801,0.256450125116389,0,0,0,0.27470839445503,0.330037999682352,0,0,0,0.290012154876366,0.616194468458578,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.445160178233687,0,0.384380134730212,0.638063562472921,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0.54907405947211,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0.424216295861138,0,0,0,0.438450885253763,0.578775534266688,0,0,0.30982349809975,0.563391205064483,0,0.0982490410131212,0.35667105148125,0.709522128141196,0.633322905892992,0.658589785919804,0,0.349934720244983,0.192444225451024,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.743212700502875,0.144269212976445,0.0711418433484141,0.318852545457645,0.997896857164083,0.383010740264733,0.635020748171649,0.324621940274555,0.280797178113459,0.228234679033192,0.783399478865116,0,0.50787533340481,0.1605880751037,0.605399121573143,0,0.343505344755765,0,0.447352215784832,0.333698283423817,0.390776190804081,0,0,0.811367035427949,0,0,0,0,0,0.222886768554957,0.568272293612826,0,0,0,0,0.140669416410513,0,0.329607748453519,0.422250816255987,0,0,0.755798243562828,0,0.492339221844278,0,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.341380344856499,0.508507300585533,0,1.03423011972439,1.16641845353302,0.347249989866585,0,0.120596438625408,0,0.110579259931225,0,0,0,0.139423744278603,0,0.227884111694002,0.46112780877612,0.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| |||
|short_description=p1@SNORD36A | |||
}} |
Revision as of 03:55, 23 January 2014
Short description: | p1@SNORD36A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SNORD36A_5end |
Coexpression cluster: | C229_Mesenchymal_CD4_Melanocyte_acute_skeletal_left_heart |
Association with transcript: | 1bp_to_ENST00000362874, NR_002448, uc010naj.2_5end |
EntrezGene: | SNORD36A |
HGNC: | 10163 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood cell | 3.36e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.59e-13 | 10 |
blastocyst | 4.59e-13 | 10 |
blastula | 4.59e-13 | 10 |
bilaminar disc | 4.59e-13 | 10 |
inner cell mass | 4.59e-13 | 10 |
cleaving embryo | 4.59e-13 | 10 |
connecting stalk | 4.59e-13 | 10 |
inner cell mass derived epiblast | 4.59e-13 | 10 |
extraembryonic mesoderm | 4.59e-13 | 10 |
extraembryonic structure | 2.84e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.92e-09 | 14 |