FFCP PHASE1:Hg19::chrX:19905604..19905615,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30011 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13867 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VSN0 | |||
|association_with_transcript=-27bp_to_ENST00000379697_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_9_at_SH3KBP1_5end | |||
|id=chrX:19905604..19905615,- | |||
|ontology_enrichment_celltype=CL:0000738!2.36e-47!140;CL:0000037!1.94e-42!172;CL:0000566!1.94e-42!172;CL:0002032!7.91e-39!165;CL:0000837!7.91e-39!165;CL:0000988!1.39e-38!182;CL:0002087!1.68e-36!119;CL:0002031!5.61e-36!124;CL:0000766!2.40e-33!76;CL:0000557!1.70e-27!71;CL:0000763!2.46e-27!112;CL:0000049!2.46e-27!112;CL:0002057!1.34e-26!42;CL:0000839!9.59e-26!70;CL:0002194!4.05e-25!63;CL:0000576!4.05e-25!63;CL:0000040!4.05e-25!63;CL:0000559!4.05e-25!63;CL:0002009!1.56e-24!65;CL:0000860!2.83e-24!45;CL:0000134!4.17e-15!358;CL:0002320!1.71e-13!365;CL:0000838!7.27e-11!52;CL:0000542!2.55e-10!53;CL:0000051!2.55e-10!53;CL:0000219!4.01e-10!390;CL:0000048!2.28e-08!430;CL:0000723!8.38e-08!436;CL:0000034!2.17e-07!444;CL:0000094!2.17e-07!8;CL:0000945!5.07e-07!24;CL:0000826!5.07e-07!24;CL:0002393!8.26e-07!9;CL:0002397!8.26e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.59e-41;33!CL:0002057;6.59e-41;33!CL:0000576;8.03e-37;48!CL:0000473;4.22e-35;39!CL:0000234;4.22e-35;39!CL:0000766;1.86e-32;69!CL:0000738;1.26e-17;136!CL:0000763;1.92e-17;100!CL:0002087;7.57e-17;104!CL:0000094;4.30e-14;8!CL:0000988;2.33e-11;177!CL:0000081;1.14e-09;11!CL:0002393;1.40e-09;6!CL:0002397;1.40e-09;6!CL:0000219;1.64e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.87e-75,136;CL:0000766,5.98e-73,72;CL:0000037,1.12e-68,168;CL:0002032,3.98e-64,161;CL:0000837,3.98e-64,161;CL:0000988,1.10e-63,177;CL:0000763,2.81e-59,108;CL:0000049,2.81e-59,108;CL:0000557,6.26e-59,67;CL:0000473,1.82e-58,48;CL:0000234,1.82e-58,48;CL:0002087,2.25e-58,115;CL:0000839,1.18e-57,66;CL:0000860,5.95e-57,42;CL:0002057,5.95e-57,42;CL:0002194,9.68e-57,59;CL:0000576,9.68e-57,59;CL:0000040,9.68e-57,59;CL:0000559,9.68e-57,59;CL:0002031,3.77e-56,120;CL:0002009,2.49e-54,61;CL:0000134,4.75e-24,354;CL:0002320,5.26e-23,361;CL:0000219,2.38e-19,386;CL:0000048,1.23e-15,427;CL:0000723,5.08e-15,433;CL:0000034,9.43e-15,441;CL:0000094,3.75e-14,8;CL:0002393,6.62e-13,9;CL:0002397,6.62e-13,9;CL:0000081,1.03e-09,11;CL:0000838,1.14e-07,52;CL:0000542,2.03e-07,53;CL:0000051,2.03e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;3.44e-40;42!CL:0000049;4.04e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.62e-32!102;UBERON:0003061!2.62e-32!102;UBERON:0002193!2.64e-31!112;UBERON:0002371!3.12e-24!80;UBERON:0001474!5.04e-23!86;UBERON:0002405!3.27e-20!115;UBERON:0004765!1.81e-18!101;UBERON:0001434!1.81e-18!101;UBERON:0002384!3.06e-13!375;UBERON:0003081!1.13e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.18e-13;15!UBERON:0000179;7.18e-13;15!UBERON:0000463;7.18e-13;15!UBERON:0002390;4.77e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.93e-64,98;UBERON:0003061,2.93e-64,98;UBERON:0002193,8.51e-58,108;UBERON:0002371,1.40e-51,76;UBERON:0001474,1.88e-46,82;UBERON:0002405,4.71e-45,93;UBERON:0004765,1.10e-40,90;UBERON:0001434,8.65e-35,100;UBERON:0002384,3.02e-22,371;UBERON:0003081,5.27e-22,203;UBERON:0002204,7.60e-15,167;UBERON:0000178,3.27e-13,15;UBERON:0000179,3.27e-13,15;UBERON:0000463,3.27e-13,15;UBERON:0000926,4.71e-09,315;UBERON:0004120,4.71e-09,315;UBERON:0006603,4.71e-09,315 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0.872338524100369,0,0,0.783556884599516,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.328402357799783,0.550975469195755,5.50709987588466,3.45446458287491,4.64448369948228,0,0,0,1.47187681102573,0.853015394924529,0.587200878669695,6.64794490238253,7.62068900386538,3.90619567288533,3.58264758783879,1.94336199611388,2.57575567634187,4.21654892460738,3.40088349319928,2.91100873425379,2.32429036905685,4.11167888021826,3.09706370895104,3.45230870786581,3.33008918487831,3.54723344832878,3.7922024881028,3.87290810150296,0,4.1413314699373,3.547779950752,3.82029923556644,3.36692281607993,6.73950956859797,5.11469700639233,3.62836430205388,3.59034583718937,2.13112375266347,4.35313857942876,3.97169657283798,2.4912889959823,6.53246529667532,4.69334626578181,3.04064382587163,3.63239701580021,4.05105399586321,5.06339819905415,1.90129757680748,2.97646019951061,3.14487968262564,6.51506060649672,5.70672192797724,7.55410257476277,1.71007646244749,1.59133341759272,2.00930569141097,0,2.18455444504853,2.66852776159066,2.98711155796555,3.2031678962881,1.14950487990897,0.661044872784862,0,2.27685187643779,4.11066032559657,1.52909291250092,0,1.12101712596307,0.526768169550154,1.96709770113833,1.57204305099666,0.616804496998528,0.167186495390678,0,0.946895611469467,1.94826728407911,0.334231370655521,1.17842362989935,0.664601683750863,0.812411591295047,0.25618263945135,0.520237390239513,1.15106533222573,0.276350017785848,0.579606171470105,0.889719378972363,0.802622484269139,1.04535523804977,0.339928028092699,1.14966148080576,0,0.253019692019503,0.637130828648193,1.30216690771284,0,0.752875595388864,1.02389288923535,1.24930726552346,1.18388626022008,3.28451198768419,0.403213486449465,1.33720097891754,0.868946423296794,0,0,0.12786256184353,0,0,0.289693037921647,0,0.486634870302636,0,0,0.263504357079378,0.654895377488563,0,0,0,1.0447784237956,0.531831842075461,1.19245312152671,1.71598473234038,1.11437250398869,0.198762407366705,0,0,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0,0,0,0,0,7.9068250461638,19.3890132074163,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0,0.908144565869588,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.309977343527296,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0.412210116953756,0,0.37223371266318,0,0.0974370051611986,0,0.184099797284599,0.161646056818812,0.355009592516614,0.302256294682921,0,0.386521706326594,0,0,0,0,0,0.10366105501537,0,0,3.12899064659632,0.643240938192885,0,0.928735856063958,0,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,0,1.40241773803446,0,0,0,0.982827216677626,0,0.882926198829301,0,0,0.219500570817251,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0.433099343283221,0,0.570762456703795,0,0,2.46217006087397,0.234004265139238,1.0404181360211,0,0.671928512795438,0.283550194484773,0,0,0.383382679165211,1.97065295158377,1.14462964217194,0.829312462163088,2.45003920808834,1.76739406796932,0.253991577168676,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0.602878754119172,1.74306691720059,0.399891964728228,0,4.01805673145701,2.10833939483032,0.239624855491583,0,4.27910715122155,0.289562613335158,0,0,0.448340575974109,0.591092280605782,1.2937654491571,1.15508732651774,0.254094624222463,0,0,0,0,5.99205619157746,8.97484377612075,11.603634376209,0,0,0,0.415941723061614,0,0.157702415033935,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0,0,0,0,3.10152039184331,5.39285502046542,1.921096040462,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.308419387605311,0.177561725313127,0.164254312027618,0.519254429183621,0,0,0.200506470303285,0.184161977871793,0.34444334449382,0,0.393373244878272,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0.509752546090077,0,0,0,0,0,0,0,0.515205058238611,0,0.165018999841176,0,0,0,0.290012154876366,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0,0.30347334256665,0,0.31481234683064,0,0,0,0,0.55597265731176,0.143124886741991,0,0,0.190630193923825,0,0.855877976067841,0,0,0.539617372749944,0.54907405947211,0.235624804691373,0.606547444719948,0,0,0,0,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0.0962221127255121,0.670302275535787,0,0.282431402330337,0,0,0,0.229723400206959,2.53723804616085,3.82318603571188,2.84823593587081,3.09701308095126,4.52498500394814,1.94541993357815,2.70015718619057,3.96562588147135,0,1.92495971052672,0,0,0.432807638929335,0.284567373393656,0,0,0.383010740264733,1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| |||
|short_description=p9@SH3KBP1 | |||
}} |
Revision as of 05:01, 23 January 2014
Short description: | p9@SH3KBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SH3KBP1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -27bp_to_ENST00000379697_5end |
EntrezGene: | SH3KBP1 |
HGNC: | 13867 |
UniProt: | Q5VSN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.93e-64 | 98 |
blood island | 2.93e-64 | 98 |
hemolymphoid system | 8.51e-58 | 108 |
bone marrow | 1.40e-51 | 76 |
bone element | 1.88e-46 | 82 |
immune system | 4.71e-45 | 93 |
skeletal element | 1.10e-40 | 90 |
skeletal system | 8.65e-35 | 100 |
connective tissue | 3.02e-22 | 371 |
lateral plate mesoderm | 5.27e-22 | 203 |
musculoskeletal system | 7.60e-15 | 167 |
blood | 3.27e-13 | 15 |
haemolymphatic fluid | 3.27e-13 | 15 |
organism substance | 3.27e-13 | 15 |
mesoderm | 4.71e-09 | 315 |
mesoderm-derived structure | 4.71e-09 | 315 |
presumptive mesoderm | 4.71e-09 | 315 |