FFCP PHASE1:Hg19::chrX:107641254..107641280,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4842 | |||
|description=CAGE_peak_at_chrX:107641254..107641280,- | |||
|id=chrX:107641254..107641280,- | |||
|ontology_enrichment_celltype=CL:0000066!5.52e-24!254;CL:0000076!2.40e-21!62;CL:0000220!2.77e-16!246;CL:0002321!6.21e-16!248;CL:0002076!2.15e-12!43;CL:0000548!4.03e-10!679;CL:0000004!4.03e-10!679;CL:0000255!4.03e-10!679;CL:0000012!7.33e-10!682;CL:0000063!2.77e-08!578;CL:0000223!1.52e-07!59;CL:0002251!1.85e-07!21;CL:0000213!2.10e-07!57;CL:0000215!2.10e-07!57;CL:0000222!2.32e-07!119;CL:0000622!2.81e-07!5;CL:0002159!7.95e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.20e-15;42!CL:0000622;1.51e-14;5!CL:0002251;3.68e-13;20!CL:0000154;4.64e-12;6!CL:0002159;1.31e-11;14!CL:0002623;6.08e-10;3!CL:0002368;1.18e-09;13!CL:0002621;1.44e-09;3!CL:0000076;4.51e-09;63!CL:0000349;4.63e-09;19!CL:0000307;1.23e-08;3!CL:0000150;6.62e-08;9!CL:1000413;3.10e-07;9!CL:0002536;8.46e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.34e-19,253;CL:0002076,3.90e-18,42;CL:0000076,5.19e-17,63;CL:0000622,8.67e-15,5;CL:0002251,2.71e-13,20;CL:0000154,2.94e-12,6;CL:0000223,7.83e-12,58;CL:0002159,1.27e-11,14;CL:0002623,4.43e-10,3;CL:0002621,9.26e-10,3;CL:0002368,1.18e-09,13;CL:0000349,5.91e-09,19;CL:0000068,1.17e-08,3;CL:0000069,1.17e-08,3;CL:0000307,1.17e-08,3;CL:0000377,1.17e-08,3;CL:0002321,2.21e-08,250;CL:0000150,4.94e-08,9;CL:1000413,6.02e-07,9;CL:0000244,7.45e-07,4;CL:0000731,7.45e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;1.23e-08;3 | |||
|ontology_enrichment_disease=DOID:1749!2.45e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.23e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.59e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000165!3.34e-09!28;UBERON:0000930!3.34e-09!28;UBERON:0003102!3.01e-08!95;UBERON:0005631!9.60e-08!14;UBERON:0000158!9.60e-08!14;UBERON:0001637!1.20e-07!42;UBERON:0003509!1.20e-07!42;UBERON:0004572!1.20e-07!42;UBERON:0001444!1.46e-07!48;UBERON:0000166!1.62e-07!21;UBERON:0001004!1.62e-07!72;UBERON:0004119!3.17e-07!169;UBERON:0000925!3.17e-07!169;UBERON:0006595!3.17e-07!169;UBERON:0001981!3.33e-07!60;UBERON:0007500!3.33e-07!60;UBERON:0004537!3.33e-07!60;UBERON:0006965!3.33e-07!60;UBERON:0004872!4.67e-07!84;UBERON:0000161!6.72e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;4.65e-15;28!UBERON:0000161;2.24e-11;19!UBERON:0000166;2.24e-11;19!UBERON:0003729;1.27e-10;13!UBERON:0005631;2.14e-10;10!UBERON:0000158;2.14e-10;10!UBERON:0001949;1.44e-09;3!UBERON:0001444;3.17e-09;48!UBERON:0007811;1.04e-08;52!UBERON:0004923;1.13e-08;55!UBERON:0000033;3.02e-08;50!UBERON:0000486;6.92e-08;12!UBERON:0000153;2.19e-07;54!UBERON:0003915;3.10e-07;9!UBERON:0004700;3.10e-07;9!UBERON:0001917;3.10e-07;9!UBERON:0000305;3.91e-07;7!UBERON:0000964;6.15e-07;4!UBERON:0010409;6.15e-07;4!UBERON:0000478;7.32e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000165,1.87e-14,29;UBERON:0000930,1.87e-14,29;UBERON:0000033,4.76e-14,56;UBERON:0001444,5.31e-13,49;UBERON:0003102,7.45e-13,99;UBERON:0005631,1.06e-12,14;UBERON:0000158,1.06e-12,14;UBERON:0000153,3.27e-12,62;UBERON:0007811,3.27e-12,62;UBERON:0003729,1.03e-10,13;UBERON:0004923,6.74e-10,66;UBERON:0001949,9.26e-10,3;UBERON:0000166,1.08e-09,22;UBERON:0004119,3.78e-09,160;UBERON:0000925,3.78e-09,160;UBERON:0006595,3.78e-09,160;UBERON:0001004,3.03e-08,74;UBERON:0000161,5.84e-08,36;UBERON:0003124,2.81e-07,7;UBERON:0000305,4.99e-07,7;UBERON:0000964,5.58e-07,4;UBERON:0010409,5.58e-07,4;UBERON:0004348,5.58e-07,4;UBERON:0005427,5.58e-07,4;UBERON:0003915,6.02e-07,9;UBERON:0004700,6.02e-07,9;UBERON:0001917,6.02e-07,9;UBERON:0000478,8.79e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,3.49506195408276,1.05506791291381,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0.61130724598361,0.246301768349837,0.550975469195755,0,0,0,0,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,1.48313777113772,0,0,0,0,0,0,0.39752481473341,1.72046919021225,1.04142150482278,1.13061588384802,1.25849830862972,0.825354125820202,1.04497483268405,0.775250277507987,0.35576626268671,0,0.805658634218294,1.52054421143703,0,0,0,0,0.22452937262617,0.450445921933289,0,0,1.28241220751285,0,0,1.3082821564276,0,0.12663051166458,1.05927344650575,0,0,0.560677600142307,0,0.24666754841716,0.622422070799533,0,0,0,0,0.468642863667593,0,1.1409436430889,1.04614076386261,0.23486899728753,0.161872944368132,0.421352420106746,2.44985005505872,0.368502951935304,0.929932030581889,0,0,0,0,2.02003336744879,1.37630371859161,1.10825646193673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,2.70565194428616,4.90943017063502,1.72082757233402,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.653638332277218,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,2.08525542276389,0,1.3068766413512,3.24059558054854,0.325808305310325,3.11980435583874,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,3.69560682037491,2.1266264586358,2.95543124919399,2.3250715081117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,1.50719688529793,1.74306691720059,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.473107245101804,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,5.15316871458641,0,4.23346410661552,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,3.20810352485256,0.644566922551274,0.114814448164607,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,1.30012049207304,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,2.97512847649761,1.34533047155574,15.5687509243393,0.809262246844399,0,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0.18532421910392,0.429374660225974,0,0.316379424718726,0,0,0,0.636406495851874,0.78494864019923,0,0,0,0,1.58510321173008,0,0,1.21856744815642,0,0,0,0,0,1.32687795048244,0.876901770507525,0,0,0.608731130888112,0,0.281695602532241,0.286822704408103,0,0,0,0,0,1.13841952129715,0.349934720244983,1.73199802905922,1.34060455107157,1.08890984861323,0,1.72202149068492,1.68471475667626,0.886860307073351,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,4.29740072527842,0,3.99308912729002,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,2.22273980289274,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0,2.55200927785536,0.457987967009312,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0.664653872707185,0,2.82539626566503,2.38944859545918,0,0.138674673013139,0,0.293977192243133,1.91530254476886,0,0,0.580537987734511,0.438535902517113,0.328461828212837,0,0,0,0,0,0,0.977756913674015,0,0,0,0,0,0,1.00838358591705,0.248505071130865,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.179287339332845,1.72723677587501,0,0,0,0.542999601753713,1.72844298240254,0.653174720218818,0,0,0.340776043570843,0.226624183040251,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0.829412415681711,0.265841714557995,0.521745061811734,0,0.761610424337591,0.406870733204662,0,0.644463342254931,0,0,0,0,0,0,0.192619830407303,0,0.782982875895635,0,0.926089897295336,0.734210113519403,0.358177682162975,0,0,0.530067437837643,0.578742114812744,0.337884881306145,0,0,0.911579868532147,0,0,0,0,0,0.737318726261158,0,0.79994958341972,0,0,0.567515953566836,0.184105950251841,0.279759015438889,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71109048804923,0.235939446695481,3.66857197043358,0.346576998451015,0,0,0,0,0,0,0,1.47394725759087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,2.66955364540966,0,0.157115589916002,0,0,0,0,0,0,0,0,0,2.90102629828252,4.95083583572455,2.76503864725637,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.535661815816973,1.05868461514708,1.44434460040503,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:107641254..107641280,- | |||
}} |
Revision as of 06:33, 23 January 2014
Short description: | p@chrX:107641254..107641280, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:107641254..107641280, - |
Coexpression cluster: | C4842_Small_amniotic_salivary_oral_Gingival_Amniotic_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.34e-19 | 253 |
endo-epithelial cell | 3.90e-18 | 42 |
squamous epithelial cell | 5.19e-17 | 63 |
acinar cell | 8.67e-15 | 5 |
epithelial cell of alimentary canal | 2.71e-13 | 20 |
protein secreting cell | 2.94e-12 | 6 |
endodermal cell | 7.83e-12 | 58 |
general ecto-epithelial cell | 1.27e-11 | 14 |
acinar cell of salivary gland | 4.43e-10 | 3 |
gingival epithelial cell | 9.26e-10 | 3 |
respiratory epithelial cell | 1.18e-09 | 13 |
extraembryonic cell | 5.91e-09 | 19 |
duct epithelial cell | 1.17e-08 | 3 |
branched duct epithelial cell | 1.17e-08 | 3 |
tracheal epithelial cell | 1.17e-08 | 3 |
tracheoblast | 1.17e-08 | 3 |
embryonic cell | 2.21e-08 | 250 |
glandular epithelial cell | 4.94e-08 | 9 |
endothelial cell of artery | 6.02e-07 | 9 |
transitional epithelial cell | 7.45e-07 | 4 |
urothelial cell | 7.45e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mouth | 1.87e-14 | 29 |
stomodeum | 1.87e-14 | 29 |
head | 4.76e-14 | 56 |
subdivision of head | 5.31e-13 | 49 |
surface structure | 7.45e-13 | 99 |
extraembryonic membrane | 1.06e-12 | 14 |
membranous layer | 1.06e-12 | 14 |
anterior region of body | 3.27e-12 | 62 |
craniocervical region | 3.27e-12 | 62 |
mouth mucosa | 1.03e-10 | 13 |
organ component layer | 6.74e-10 | 66 |
gingival epithelium | 9.26e-10 | 3 |
oral opening | 1.08e-09 | 22 |
endoderm-derived structure | 3.78e-09 | 160 |
endoderm | 3.78e-09 | 160 |
presumptive endoderm | 3.78e-09 | 160 |
respiratory system | 3.03e-08 | 74 |
orifice | 5.84e-08 | 36 |
chorion | 2.81e-07 | 7 |
amnion | 4.99e-07 | 7 |
cornea | 5.58e-07 | 4 |
eye surface | 5.58e-07 | 4 |
optic eminence | 5.58e-07 | 4 |
corneal primordium | 5.58e-07 | 4 |
endothelial tube | 6.02e-07 | 9 |
arterial system endothelium | 6.02e-07 | 9 |
endothelium of artery | 6.02e-07 | 9 |
extraembryonic structure | 8.79e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.59e-09 | 14 |