FFCP PHASE1:Mm9::chr19:29441937..29441958,+: Difference between revisions
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{{FFCP|EntrezGene=60533|HGNC=|MCL_coexpression_id=68|UniProt=Q9EP73|association_with_transcript=0bp_to_ENSMUST00000016640_5end|description=CAGE_peak_1_at_Cd274_5end|id=chr19:29441937..29441958,+|ontology_enrichment_celltype=CL:0000988!5.50e-11!32;CL:0002032!5.50e-11!32;CL:0000037!5.50e-11!32;CL:0000566!5.50e-11!32;CL:0000837!5.50e-11!32;CL:0002031!6.97e-10!25;CL:0002320!2.83e-07!46;CL:0000134!2.83e-07!46;CL:0000791!5.76e-07!9;CL:0000789!5.76e-07!9;CL:0002420!5.76e-07!9;CL:0002419!5.76e-07!9;CL:0000790!5.76e-07!9;CL:0000838!6.24e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,2.15e-11,32;CL:0002032,2.15e-11,32;CL:0000037,2.15e-11,32;CL:0000837,2.15e-11,32;CL:0002031,2.63e-10,25;CL:0002320,2.62e-08,46;CL:0000134,2.62e-08,46;CL:0000791,2.11e-07,9;CL:0000789,2.11e-07,9;CL:0002420,2.11e-07,9;CL:0002419,2.11e-07,9;CL:0000790,2.11e-07,9;CL:0000838,2.30e-07,12;CL:0000624,7.21e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.55e-17!48;UBERON:0002405!4.50e-17!70;UBERON:0002390!6.89e-16!45;UBERON:0003061!6.89e-16!45;UBERON:0004177!1.07e-10!29;UBERON:0005057!2.20e-10!51;UBERON:0003081!4.12e-10!88;UBERON:0006562!1.39e-09!24;UBERON:0001557!1.39e-09!24;UBERON:0001042!1.39e-09!24;UBERON:0008814!1.39e-09!24;UBERON:0009145!1.39e-09!24;UBERON:0003408!1.76e-09!24;UBERON:0002370!2.52e-09!23;UBERON:0000974!2.52e-09!23;UBERON:0004807!2.52e-09!23;UBERON:0005058!2.52e-09!23;UBERON:0003351!2.52e-09!23;UBERON:0009113!2.52e-09!23;UBERON:0003295!2.52e-09!23;UBERON:0009722!2.52e-09!23;UBERON:0005562!2.52e-09!23;UBERON:0007690!2.52e-09!23;UBERON:0005911!8.52e-08!69;UBERON:0004119!1.08e-07!130;UBERON:0000925!1.08e-07!130;UBERON:0006595!1.08e-07!130;UBERON:0003929!1.89e-07!55;UBERON:0002384!2.83e-07!46;UBERON:0001007!4.25e-07!128;UBERON:0001555!4.25e-07!128;UBERON:0007026!4.25e-07!128;UBERON:0007023!5.39e-07!51;UBERON:0000490!9.52e-07!66;UBERON:0001004!9.71e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.25e-19,48;UBERON:0002405,8.25e-19,48;UBERON:0002390,2.94e-17,45;UBERON:0003061,2.94e-17,45;UBERON:0000077,2.57e-13,35;UBERON:0004177,6.83e-12,29;UBERON:0005057,6.83e-12,29;UBERON:0006562,4.11e-11,24;UBERON:0001557,4.11e-11,24;UBERON:0001042,4.11e-11,24;UBERON:0008814,4.11e-11,24;UBERON:0009145,4.11e-11,24;UBERON:0003408,5.39e-11,24;UBERON:0002370,7.76e-11,23;UBERON:0000974,7.76e-11,23;UBERON:0004807,7.76e-11,23;UBERON:0005058,7.76e-11,23;UBERON:0003351,7.76e-11,23;UBERON:0009113,7.76e-11,23;UBERON:0003295,7.76e-11,23;UBERON:0009722,7.76e-11,23;UBERON:0005562,7.76e-11,23;UBERON:0007690,7.76e-11,23;UBERON:0003081,1.12e-10,87;UBERON:0004119,5.99e-10,118;UBERON:0000925,5.99e-10,118;UBERON:0006595,5.99e-10,118;UBERON:0001007,3.14e-09,116;UBERON:0001555,3.14e-09,116;UBERON:0007026,3.14e-09,116;UBERON:0005911,8.34e-09,69;UBERON:0004921,1.27e-08,114;UBERON:0001004,1.32e-08,42;UBERON:0000072,1.56e-08,27;UBERON:0000065,2.12e-08,41;UBERON:0002384,2.62e-08,46;UBERON:0003929,3.45e-08,55;UBERON:0001041,8.42e-08,80;UBERON:0000490,2.84e-07,66|phase1_expression=0.160148847104794,6.63053274514786,5.0049916332849,3.0246421130683,2.50447864973174,1.34303417529512,2.33612640595526,61.2044553113072,390.26633780442,550.753830435651,346.887603624873,250.404807086361,37.6641605848653,38.2027158571019,9.99329285446988,15.1856450542369,3.49780939064073,69.0862142134541,65.9520425643604,40.3170169208129,7.39876624314307,1.68794617041505,2.35079810225042,11.3594620183319,7.57050627521661,9.76194338995534,3.87685796543167,5.17130958446134,8.7410772949932,6.30075324399827,4.21287970245079,3.81018404075779,1.84519436275371,15.8481681015439,0.288851619751275,0,0,7.95210098400125,3.906676722619,4.18818995179039,8.82347232046521,10.9287277593351,2.91306211818692,0.755380907853464,1.4192770370732,0.183546752161682,0,0.218025156380447,0.219686182734472,0.194429899074283,0.279972843250725,0,84.5624334530991,47.8739013727487,27.2235977305396,1.80081605225163,2.57880095944881,5.15672092277442,0,0,0,0,0,10.3488467487361,9.88866362566974,8.5257613793532,0.599200221036809,1.15265491596466,0.207379224616955,0.405017814995072,0.210324961351382,0,0.662605622854841,0.122490799214954,0,0,0,0.638436690425939,0.307213066512487,0,0,0,0,0,1.22238598221448,0,0,0,5.98236927332154,1.13357340160178,25.7979394944493,4.30211938490693,8.83962733820076,0.539703191637817,0.649776417447669,0,4.63466586434781,0,0,0,0.281686839553361,0,0,0,0,0,0,6.39429726426736,154.326978653714,9.35185476108396,1.56136794089522,0,0.461230994512117,1.20578112442098,1.29347577849275,2.76466500925286,21.5059621928905,118.282273960488,14.153768831198,1.29413479957927,2.87093973998512,2.42437626567611,16.775258509631,0.585561594023094,0,15.0719662573069,6.4700167233197,6.59893004092748,9.02198612218759,1.64769703345305,6.40500843946077,0.251308704225729,0.695297280769106,0.511430914660661,0.62336413367868,0.486723789203273,0.203678727700633,3.35898820647251,2.27450482590307,11.1534183619831,1.30120442962704,0.689706313300419,0.540186389416048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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:60533 | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9EP73 | |||
|association_with_transcript=0bp_to_ENSMUST00000016640_5end | |||
|cluster_id=chr19:29441937..29441958,+ | |||
|description=CAGE_peak_1_at_Cd274_5end | |||
|id=chr19:29441937..29441958,+ | |||
|ontology_enrichment_celltype=CL:0000988!5.50e-11!32;CL:0002032!5.50e-11!32;CL:0000037!5.50e-11!32;CL:0000566!5.50e-11!32;CL:0000837!5.50e-11!32;CL:0002031!6.97e-10!25;CL:0002320!2.83e-07!46;CL:0000134!2.83e-07!46;CL:0000791!5.76e-07!9;CL:0000789!5.76e-07!9;CL:0002420!5.76e-07!9;CL:0002419!5.76e-07!9;CL:0000790!5.76e-07!9;CL:0000838!6.24e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.15e-11,32;CL:0002032,2.15e-11,32;CL:0000037,2.15e-11,32;CL:0000837,2.15e-11,32;CL:0002031,2.63e-10,25;CL:0002320,2.62e-08,46;CL:0000134,2.62e-08,46;CL:0000791,2.11e-07,9;CL:0000789,2.11e-07,9;CL:0002420,2.11e-07,9;CL:0002419,2.11e-07,9;CL:0000790,2.11e-07,9;CL:0000838,2.30e-07,12;CL:0000624,7.21e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.55e-17!48;UBERON:0002405!4.50e-17!70;UBERON:0002390!6.89e-16!45;UBERON:0003061!6.89e-16!45;UBERON:0004177!1.07e-10!29;UBERON:0005057!2.20e-10!51;UBERON:0003081!4.12e-10!88;UBERON:0006562!1.39e-09!24;UBERON:0001557!1.39e-09!24;UBERON:0001042!1.39e-09!24;UBERON:0008814!1.39e-09!24;UBERON:0009145!1.39e-09!24;UBERON:0003408!1.76e-09!24;UBERON:0002370!2.52e-09!23;UBERON:0000974!2.52e-09!23;UBERON:0004807!2.52e-09!23;UBERON:0005058!2.52e-09!23;UBERON:0003351!2.52e-09!23;UBERON:0009113!2.52e-09!23;UBERON:0003295!2.52e-09!23;UBERON:0009722!2.52e-09!23;UBERON:0005562!2.52e-09!23;UBERON:0007690!2.52e-09!23;UBERON:0005911!8.52e-08!69;UBERON:0004119!1.08e-07!130;UBERON:0000925!1.08e-07!130;UBERON:0006595!1.08e-07!130;UBERON:0003929!1.89e-07!55;UBERON:0002384!2.83e-07!46;UBERON:0001007!4.25e-07!128;UBERON:0001555!4.25e-07!128;UBERON:0007026!4.25e-07!128;UBERON:0007023!5.39e-07!51;UBERON:0000490!9.52e-07!66;UBERON:0001004!9.71e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.25e-19,48;UBERON:0002405,8.25e-19,48;UBERON:0002390,2.94e-17,45;UBERON:0003061,2.94e-17,45;UBERON:0000077,2.57e-13,35;UBERON:0004177,6.83e-12,29;UBERON:0005057,6.83e-12,29;UBERON:0006562,4.11e-11,24;UBERON:0001557,4.11e-11,24;UBERON:0001042,4.11e-11,24;UBERON:0008814,4.11e-11,24;UBERON:0009145,4.11e-11,24;UBERON:0003408,5.39e-11,24;UBERON:0002370,7.76e-11,23;UBERON:0000974,7.76e-11,23;UBERON:0004807,7.76e-11,23;UBERON:0005058,7.76e-11,23;UBERON:0003351,7.76e-11,23;UBERON:0009113,7.76e-11,23;UBERON:0003295,7.76e-11,23;UBERON:0009722,7.76e-11,23;UBERON:0005562,7.76e-11,23;UBERON:0007690,7.76e-11,23;UBERON:0003081,1.12e-10,87;UBERON:0004119,5.99e-10,118;UBERON:0000925,5.99e-10,118;UBERON:0006595,5.99e-10,118;UBERON:0001007,3.14e-09,116;UBERON:0001555,3.14e-09,116;UBERON:0007026,3.14e-09,116;UBERON:0005911,8.34e-09,69;UBERON:0004921,1.27e-08,114;UBERON:0001004,1.32e-08,42;UBERON:0000072,1.56e-08,27;UBERON:0000065,2.12e-08,41;UBERON:0002384,2.62e-08,46;UBERON:0003929,3.45e-08,55;UBERON:0001041,8.42e-08,80;UBERON:0000490,2.84e-07,66 | |||
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| |||
|short_description=p1@Cd274 | |||
}} |
Revision as of 20:51, 3 August 2015
Short description: | p1@Cd274 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cd274_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | 0bp_to_ENSMUST00000016640_5end |
EntrezGene: | 60533 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.15e-11 | 32 |
hematopoietic oligopotent progenitor cell | 2.15e-11 | 32 |
hematopoietic stem cell | 2.15e-11 | 32 |
hematopoietic multipotent progenitor cell | 2.15e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 2.63e-10 | 25 |
connective tissue cell | 2.62e-08 | 46 |
mesenchymal cell | 2.62e-08 | 46 |
mature alpha-beta T cell | 2.11e-07 | 9 |
alpha-beta T cell | 2.11e-07 | 9 |
immature T cell | 2.11e-07 | 9 |
mature T cell | 2.11e-07 | 9 |
immature alpha-beta T cell | 2.11e-07 | 9 |
lymphoid lineage restricted progenitor cell | 2.30e-07 | 12 |
CD4-positive, alpha-beta T cell | 7.21e-07 | 8 |