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FFCP PHASE1:Mm9::chr5:52957459..52957501,-: Difference between revisions

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{{FFCP|EntrezGene=246316|HGNC=|MCL_coexpression_id=3519|UniProt=Q8K4Z0|association_with_transcript=0bp_to_ENSMUST00000113928_5end|description=CAGE_peak_1_at_Lgi2_5end|id=chr5:52957459..52957501,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.39e-11!71;UBERON:0003075!4.39e-11!71;UBERON:0007284!4.39e-11!71;UBERON:0000033!2.94e-10!63;UBERON:0000468!6.43e-09!333;UBERON:0001049!1.52e-08!52;UBERON:0005068!1.52e-08!52;UBERON:0006241!1.52e-08!52;UBERON:0007135!1.52e-08!52;UBERON:0000955!3.82e-08!50;UBERON:0006238!3.82e-08!50;UBERON:0003056!5.78e-08!49;UBERON:0002616!9.23e-08!49;UBERON:0002021!9.51e-08!10;UBERON:0000411!9.51e-08!10;UBERON:0001950!9.51e-08!10;UBERON:0000922!9.03e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.49e-10,64;UBERON:0003075,1.49e-10,64;UBERON:0007284,1.49e-10,64;UBERON:0000073,3.37e-09,54;UBERON:0001049,2.44e-08,52;UBERON:0005068,2.44e-08,52;UBERON:0006241,2.44e-08,52;UBERON:0007135,2.44e-08,52;UBERON:0010314,2.48e-08,92;UBERON:0010371,4.47e-08,73;UBERON:0002021,5.15e-08,10;UBERON:0000411,5.15e-08,10;UBERON:0001950,5.15e-08,10;UBERON:0003056,7.39e-08,49|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,0,0,0.57423196411502,0.86152399231815,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,1.31790010585369,0,0.782391344348039,0,0.659058548203415,0,1.39986421625363,0,0,0,0,0.514518872071894,20.057340795713,7.73508138416164,3.03474691289397,2.11596391708813,2.53532561402472,5.08266798103698,1.77858959222228,0.449949858640699,0.988866362566974,0.7104801149461,0.299600110518405,0,0.103689612308478,0.540023753326763,0.630974884054146,10.5690864229407,9.05561017901615,1.10241719293459,0.670918297127655,0,26.4278114398533,14.8117312178818,17.050325191443,2.50583946687368,2.47016637726506,0,22.3346399201105,11.2552522006336,11.1542720877071,12.0797720044204,8.25755748634797,5.40558392893372,0.37863096666592,0.529000920747499,2.02905142091174,0,0,0,0,0,2.24711072210803,0,0,0,2.25349471642689,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.593768556259299,5.37804512975021,8.22056791442781,4.84292544237723,5.12456977878917,4.11560474974967,1.38233250462643,0,7.66376591675532,0,2.91180329905337,0.883366073841574,0.484875253135222,1.86391761218122,17.2740670236813,19.6879904404648,0.766371165625774,0,0,0,20.9706895166752,19.6725259212009,4.64921102817598,20.5112697826886,24.0372529890511,17.8697718321222,17.3598151482501,14.7667077582959,1.61729061793121,1.0108910337347,4.20883711772948,3.513251959993,5.9774547152703,8.10279584124071,15.5225962370787,13.8114093277196,9.48041530107888,9.7449793542118,13.4525752784288,0.431135985865684,1.32374256117473,2.11141348996739,4.3839146485515,3.33656699070717,4.179025998266,2.46938563689532,3.98068533636986,0,0,0,2.69263504296152,1.64168241986767,4.32148947506436,2.84093682702252,1.77087808572663,1.85120535464854,2.09280550275367,1.07309360559848,0.583826711835847,1.6455984991348,0.985004784474571,1.54030738137126,0.730999937126662,1.53685080703735,0.268412837520744,7.36014819974445,1.44066457330998,0,1.05780226665418,14.7168892869311,9.28946687441754,9.27845721519072,6.25218926332362,7.56085349072559,6.65789691393957,3.79623249235609,4.11747386810027,3.2673577144035,3.18330355265841,3.8992817423824,2.69645822596266,3.6743468478698,1.1948476395262,2.27601481143698,5.59817711787671,6.76246414038483,6.31319116320474,5.62462212786115,5.11991485199326,6.26041717530147,0.295220295959204,0,0.370191491765402,0,0.166845105716094,2.16214894624523,0.674586337154561,1.01430060694251,1.4470629585145,1.78238096246994,2.5892652370573,0.810676133875177,1.09824565275233,1.43768206527355,1.11642284300551,4.05648975048929,1.51547326768267,0.538192240565737,0.482443521363367,2.95605104266567,2.27389694124582,2.77040459951444,3.39490171550376,2.58159273117352,1.84256883185997,1.90434912708811,2.73187107000918,4.88668946729192,5.3151525515706,4.30527875375215,4.58817281204066,2.76295970985433,2.02508682014116,0,0,0.983528546038072,0.827810238914197,38.3715910070823,34.8118709178843,0,3.02965112645248,1.57754109708128,1.56175497718655,1.50796378412959,0.477937595905104,0,0,1.21443210502468,0,0,13.1741739732941,4.9679029822894,19.2310851960636,15.3113741792362,9.89820737835213,3.98235415019888,13.352934988524,19.3487076457441,32.2514686382586,27.4630760379119,22.4427657999067,7.75284879504663,16.7225515559653,12.1209108650805,8.21695570633122,2.10837217149998,8.25084345985495,0,2.88097750450096,3.36332577835162,5.14408884075822,4.25616560741457,5.70780216326626,8.22745103010605,2.43571959291679,0,0.63549621259146,1.32317038832977,4.78170133530292,0.645857706783622,1.02531972377865,0.477489376012546,0.492422699235184,2.04036585640896,33.3765543618917,0.170870880797853,7.22354037871279,2.40752885580625,0.188368457004691,0,0,0,0,0,0.954670618015114,7.27572785236611,19.3153493770506,15.4447637375176,14.2180041289839,12.2283035697859,9.30563990055263,7.60411792673091,4.18809507174447,0.90730481304255,1.24267862617385,0,1.34564891439581,2.64733584731356,6.80579159204167,7.36210993823067,9.46154302748358,6.68936260280798,7.29144555126121,2.83120229949419,0,0.864090018773596,0.632022241256357,4.25722952109345,4.41657115808757,4.80707045017842,4.833720783022,2.98022032171897,1.9231271923195,0.738447635872886,1.21159739937777,0.685861259894999,0.604957110821043,0.292373642219257,0.577271049841977,0,1.13365191807606,0.221985953374065,0,0,1.9318959403219,1.68914227906064,3.6630324853453,5.57357785605571,0,22.5900737046827,23.9369122983732,18.3326564300607,25.6061241692095,26.718218271055,22.661816921691,24.9758325085768,23.4167025676595,20.3914084042892,26.4057758993428,0.415149390336707,1.19707462020309,2.56100408631201,5.59145449257076,3.98265008993166,2.75765262675021,4.88942801163553,6.59312183164461,5.77654577265267,4.54854981174835,5.83002389747551,6.79054828989874,5.3375659257833,5.6342134116285,5.39893408182765,5.23923060411381,6.48952225291191,3.27945674788299,4.12085900803307,4.26876868389752,6.17164654293748,4.08194354166476,7.39152188836695,4.21504608233753,7.15231291156513,5.83840794452568,5.67076715905595,7.89209134313529,5.29636043998861,6.17256498823512,6.64356101495375,4.92522411877817,5.72923460437565,4.95797891795091,3.66522560864169,9.49280196164194,5.14649538579898,3.00819475667618,3.06061331310149,3.97064554415128,2.78241402744506|short_description=p1@Lgi2}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:246316
|HGNC=
|MCL_coexpression_id=3519
|TSSclassifier=NA
|UniProt=uniprot:Q8K4Z0
|association_with_transcript=0bp_to_ENSMUST00000113928_5end
|cluster_id=chr5:52957459..52957501,-
|description=CAGE_peak_1_at_Lgi2_5end
|id=chr5:52957459..52957501,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.39e-11!71;UBERON:0003075!4.39e-11!71;UBERON:0007284!4.39e-11!71;UBERON:0000033!2.94e-10!63;UBERON:0000468!6.43e-09!333;UBERON:0001049!1.52e-08!52;UBERON:0005068!1.52e-08!52;UBERON:0006241!1.52e-08!52;UBERON:0007135!1.52e-08!52;UBERON:0000955!3.82e-08!50;UBERON:0006238!3.82e-08!50;UBERON:0003056!5.78e-08!49;UBERON:0002616!9.23e-08!49;UBERON:0002021!9.51e-08!10;UBERON:0000411!9.51e-08!10;UBERON:0001950!9.51e-08!10;UBERON:0000922!9.03e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.49e-10,64;UBERON:0003075,1.49e-10,64;UBERON:0007284,1.49e-10,64;UBERON:0000073,3.37e-09,54;UBERON:0001049,2.44e-08,52;UBERON:0005068,2.44e-08,52;UBERON:0006241,2.44e-08,52;UBERON:0007135,2.44e-08,52;UBERON:0010314,2.48e-08,92;UBERON:0010371,4.47e-08,73;UBERON:0002021,5.15e-08,10;UBERON:0000411,5.15e-08,10;UBERON:0001950,5.15e-08,10;UBERON:0003056,7.39e-08,49
|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,0,0,0.57423196411502,0.86152399231815,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,1.31790010585369,0,0.782391344348039,0,0.659058548203415,0,1.39986421625363,0,0,0,0,0.514518872071894,20.057340795713,7.73508138416164,3.03474691289397,2.11596391708813,2.53532561402472,5.08266798103698,1.77858959222228,0.449949858640699,0.988866362566974,0.7104801149461,0.299600110518405,0,0.103689612308478,0.540023753326763,0.630974884054146,10.5690864229407,9.05561017901615,1.10241719293459,0.670918297127655,0,26.4278114398533,14.8117312178818,17.050325191443,2.50583946687368,2.47016637726506,0,22.3346399201105,11.2552522006336,11.1542720877071,12.0797720044204,8.25755748634797,5.40558392893372,0.37863096666592,0.529000920747499,2.02905142091174,0,0,0,0,0,2.24711072210803,0,0,0,2.25349471642689,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.593768556259299,5.37804512975021,8.22056791442781,4.84292544237723,5.12456977878917,4.11560474974967,1.38233250462643,0,7.66376591675532,0,2.91180329905337,0.883366073841574,0.484875253135222,1.86391761218122,17.2740670236813,19.6879904404648,0.766371165625774,0,0,0,20.9706895166752,19.6725259212009,4.64921102817598,20.5112697826886,24.0372529890511,17.8697718321222,17.3598151482501,14.7667077582959,1.61729061793121,1.0108910337347,4.20883711772948,3.513251959993,5.9774547152703,8.10279584124071,15.5225962370787,13.8114093277196,9.48041530107888,9.7449793542118,13.4525752784288,0.431135985865684,1.32374256117473,2.11141348996739,4.3839146485515,3.33656699070717,4.179025998266,2.46938563689532,3.98068533636986,0,0,0,2.69263504296152,1.64168241986767,4.32148947506436,2.84093682702252,1.77087808572663,1.85120535464854,2.09280550275367,1.07309360559848,0.583826711835847,1.6455984991348,0.985004784474571,1.54030738137126,0.730999937126662,1.53685080703735,0.268412837520744,7.36014819974445,1.44066457330998,0,1.05780226665418,14.7168892869311,9.28946687441754,9.27845721519072,6.25218926332362,7.56085349072559,6.65789691393957,3.79623249235609,4.11747386810027,3.2673577144035,3.18330355265841,3.8992817423824,2.69645822596266,3.6743468478698,1.1948476395262,2.27601481143698,5.59817711787671,6.76246414038483,6.31319116320474,5.62462212786115,5.11991485199326,6.26041717530147,0.295220295959204,0,0.370191491765402,0,0.166845105716094,2.16214894624523,0.674586337154561,1.01430060694251,1.4470629585145,1.78238096246994,2.5892652370573,0.810676133875177,1.09824565275233,1.43768206527355,1.11642284300551,4.05648975048929,1.51547326768267,0.538192240565737,0.482443521363367,2.95605104266567,2.27389694124582,2.77040459951444,3.39490171550376,2.58159273117352,1.84256883185997,1.90434912708811,2.73187107000918,4.88668946729192,5.3151525515706,4.30527875375215,4.58817281204066,2.76295970985433,2.02508682014116,0,0,0.983528546038072,0.827810238914197,38.3715910070823,34.8118709178843,0,3.02965112645248,1.57754109708128,1.56175497718655,1.50796378412959,0.477937595905104,0,0,1.21443210502468,0,0,13.1741739732941,4.9679029822894,19.2310851960636,15.3113741792362,9.89820737835213,3.98235415019888,13.352934988524,19.3487076457441,32.2514686382586,27.4630760379119,22.4427657999067,7.75284879504663,16.7225515559653,12.1209108650805,8.21695570633122,2.10837217149998,8.25084345985495,0,2.88097750450096,3.36332577835162,5.14408884075822,4.25616560741457,5.70780216326626,8.22745103010605,2.43571959291679,0,0.63549621259146,1.32317038832977,4.78170133530292,0.645857706783622,1.02531972377865,0.477489376012546,0.492422699235184,2.04036585640896,33.3765543618917,0.170870880797853,7.22354037871279,2.40752885580625,0.188368457004691,0,0,0,0,0,0.954670618015114,7.27572785236611,19.3153493770506,15.4447637375176,14.2180041289839,12.2283035697859,9.30563990055263,7.60411792673091,4.18809507174447,0.90730481304255,1.24267862617385,0,1.34564891439581,2.64733584731356,6.80579159204167,7.36210993823067,9.46154302748358,6.68936260280798,7.29144555126121,2.83120229949419,0,0.864090018773596,0.632022241256357,4.25722952109345,4.41657115808757,4.80707045017842,4.833720783022,2.98022032171897,1.9231271923195,0.738447635872886,1.21159739937777,0.685861259894999,0.604957110821043,0.292373642219257,0.577271049841977,0,1.13365191807606,0.221985953374065,0,0,1.9318959403219,1.68914227906064,3.6630324853453,5.57357785605571,0,22.5900737046827,23.9369122983732,18.3326564300607,25.6061241692095,26.718218271055,22.661816921691,24.9758325085768,23.4167025676595,20.3914084042892,26.4057758993428,0.415149390336707,1.19707462020309,2.56100408631201,5.59145449257076,3.98265008993166,2.75765262675021,4.88942801163553,6.59312183164461,5.77654577265267,4.54854981174835,5.83002389747551,6.79054828989874,5.3375659257833,5.6342134116285,5.39893408182765,5.23923060411381,6.48952225291191,3.27945674788299,4.12085900803307,4.26876868389752,6.17164654293748,4.08194354166476,7.39152188836695,4.21504608233753,7.15231291156513,5.83840794452568,5.67076715905595,7.89209134313529,5.29636043998861,6.17256498823512,6.64356101495375,4.92522411877817,5.72923460437565,4.95797891795091,3.66522560864169,9.49280196164194,5.14649538579898,3.00819475667618,3.06061331310149,3.97064554415128,2.78241402744506
|short_description=p1@Lgi2
}}

Revision as of 11:07, 4 August 2015

Short description:p1@Lgi2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lgi2_5end
Coexpression cluster:MCL_coexpression_mm9:3519
Association with transcript: 0bp_to_ENSMUST00000113928_5end
EntrezGene:246316
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Lgi2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.06
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.06
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C55.38
adrenal gland, embryo E16.CNhs11004.1254-43D68.22
adrenal gland, embryo E17.CNhs11043.1263-45I14.84
adrenal gland, embryo E18.CNhs11026.1262-18F55.12
adrenal gland, neonate N00.CNhs11191.1311-23C14.12
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H17.66
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B217.27
cerebellum, neonate N30.CNhs11135.1395-42I219.69
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A420.97
corpus striatum, adult.CNhs10487.19-21D819.67
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D520.51
cortex, neonate N30.CNhs11107.1392-42F224.04
diencephalon, adult.CNhs10482.20-12F217.87
diencephalon, neonate N30.CNhs11201.1388-42B217.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E25.98
eyeball, embryo E15.CNhs10593.426-16C98.10
eyeball, embryo E17.CNhs11023.1261-18D415.52
eyeball, neonate N00.CNhs11207.633-15C613.81
eyeball, neonate N01.CNhs11140.1532-43E79.48
eyeball, neonate N02.CNhs11205.1551-44G89.74
eyeball, neonate N16.CNhs11188.777-19A213.45
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A84.38
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I514.72
intestine, embryo E13.CNhs11010.381-16D59.29
intestine, embryo E15.CNhs10602.976-16D89.28
intestine, embryo E16.CNhs10585.463-22H46.25
intestine, embryo E17.CNhs10582.482-18D37.56
intestine, embryo E18.CNhs10526.1289-20F76.66
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F85.60
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C75.62
kidney, neonate N00.CNhs11214.646-21G75.12
kidney, neonate N10.CNhs11206.758-6D56.26
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E54.89
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A44.59
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C238.37
medulla oblongata, neonate N30.CNhs11200.1396-42A334.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I913.17
ovary, adult.CNhs10507.91-2I74.97
ovary, embryo E18.CNhs11040.505-44H719.23
ovary, neonate N00.CNhs11217.1299-22I415.31
oviduct, adult pregnant day01.CNhs10500.988-6G69.90
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F413.35
pancreas, embryo E15.CNhs11042.1556-45F219.35
pancreas, embryo E16.CNhs11003.460-26E532.25
pancreas, embryo E17.CNhs10599.1558-45G327.46
pancreas, embryo E18.CNhs10580.1535-43I722.44
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D716.72
pancreas, neonate N02.CNhs11139.1539-43D812.12
pancreas, neonate N16.CNhs11136.787-43B68.22
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A55.14
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F58.23
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C34.78
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C933.38
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C17.22
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E37.28
stomach, embryo E15.CNhs10603.1252-16G819.32
stomach, embryo E16.CNhs11022.459-17D415.44
stomach, embryo E17.CNhs11006.1035-18D514.22
stomach, embryo E18.CNhs10999.1286-20C612.23
stomach, neonate N03.CNhs11193.1340-24B89.31
stomach, neonate N07.CNhs11210.718-18A97.60
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G56.81
testis, embryo E17.CNhs11029.486-18I57.36
testis, embryo E18.CNhs11027.503-18G59.46
testis, neonate N00.CNhs11189.1300-22B76.69
testis, neonate N07.CNhs11222.726-26I47.29
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I24.42
thymus, embryo E16.CNhs11002.456-26C54.81
thymus, embryo E17.CNhs10581.478-18C14.83
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D55.57
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.94
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.72
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A522.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A723.42
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.39
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.41
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I59.49
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.49e-1064
neural plate1.49e-1064
presumptive neural plate1.49e-1064
regional part of nervous system3.37e-0954
neural tube2.44e-0852
neural rod2.44e-0852
future spinal cord2.44e-0852
neural keel2.44e-0852
structure with developmental contribution from neural crest2.48e-0892
ecto-epithelium4.47e-0873
occipital lobe5.15e-0810
visual cortex5.15e-0810
neocortex5.15e-0810
pre-chordal neural plate7.39e-0849
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