FFCP PHASE1:Mm9::chr4:119705371..119705471,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2282|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:119705371..119705471,+|id=chr4:119705371..119705471,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,4.47e-07,9;CL:0000789,4.47e-07,9;CL:0002420,4.47e-07,9;CL:0002419,4.47e-07,9;CL:0000790,4.47e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!2.23e-11!41;UBERON:0001004!4.18e-11!42;UBERON:0002193!6.02e-11!48;UBERON:0002390!6.45e-11!45;UBERON:0003061!6.45e-11!45;UBERON:0006562!1.33e-10!24;UBERON:0001557!1.33e-10!24;UBERON:0001042!1.33e-10!24;UBERON:0008814!1.33e-10!24;UBERON:0009145!1.33e-10!24;UBERON:0002370!2.52e-10!23;UBERON:0000974!2.52e-10!23;UBERON:0004807!2.52e-10!23;UBERON:0005058!2.52e-10!23;UBERON:0003351!2.52e-10!23;UBERON:0009113!2.52e-10!23;UBERON:0003295!2.52e-10!23;UBERON:0009722!2.52e-10!23;UBERON:0005562!2.52e-10!23;UBERON:0007690!2.52e-10!23;UBERON:0004177!5.89e-10!29;UBERON:0003408!6.68e-10!24;UBERON:0007811!4.68e-08!86;UBERON:0000072!6.84e-08!27;UBERON:0002021!1.12e-07!10;UBERON:0000411!1.12e-07!10;UBERON:0001950!1.12e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000065,4.82e-15,41;UBERON:0001004,2.46e-14,42;UBERON:0006562,5.63e-14,24;UBERON:0001557,5.63e-14,24;UBERON:0001042,5.63e-14,24;UBERON:0008814,5.63e-14,24;UBERON:0009145,5.63e-14,24;UBERON:0002370,1.24e-13,23;UBERON:0000974,1.24e-13,23;UBERON:0004807,1.24e-13,23;UBERON:0005058,1.24e-13,23;UBERON:0003351,1.24e-13,23;UBERON:0009113,1.24e-13,23;UBERON:0003295,1.24e-13,23;UBERON:0009722,1.24e-13,23;UBERON:0005562,1.24e-13,23;UBERON:0007690,1.24e-13,23;UBERON:0002390,1.08e-12,45;UBERON:0003061,1.08e-12,45;UBERON:0003408,1.19e-12,24;UBERON:0004177,2.32e-12,29;UBERON:0005057,2.32e-12,29;UBERON:0002193,6.08e-12,48;UBERON:0002405,6.08e-12,48;UBERON:0000072,2.67e-11,27;UBERON:0000077,9.56e-10,35;UBERON:0002021,2.96e-09,10;UBERON:0000411,2.96e-09,10;UBERON:0001950,2.96e-09,10;UBERON:0002619,5.43e-07,17;UBERON:0001016,5.75e-07,75;UBERON:0011216,8.84e-07,194;UBERON:0007811,9.11e-07,36|phase1_expression=0.320297694209588,0,0,0.30246421130683,0.500895729946347,0.16787927191189,0,6.06879620175408,48.572109142325,61.3249058963623,96.7381520474103,68.3647402590033,2.56801094896809,2.79745287740792,0.333109761815663,0.607425802169478,0,6.15151222448563,6.99283611389268,4.66828616977833,1.78590909317247,0,0,0.799962113967033,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,1.00717454380462,2.33166941804883,0.550640256485045,0,2.39827672018491,1.09843091367236,1.1665793944457,0.55994568650145,1.43752564364972,3.18786951509699,2.90144856804538,2.68875039313971,1.54355661621568,1.14613375975503,1.54701627683233,0.606949382578793,0,0.633831403506179,1.35537812827653,0.889294796111139,1.7997994345628,1.97773272513395,2.1314403448383,2.69640099466564,2.30530983192933,0.933206510776299,1.08004750665353,0.630974884054146,1.14260393761521,2.20868540951614,0.489963196859816,0.958454710182364,0,3.30347642998166,3.44755812830007,2.30409799884365,0,0.457438218012048,0,0.837548997004143,0.56276261003168,1.37518422999129,0.589257170947335,0.854230084794618,1.3047961207771,4.39211921332468,1.81371744256285,0.869593466105033,0,0,0,0.649776417447669,0,0.421333260395256,0.511290967734173,0,0,0.281686839553361,0,2.54805239706646,0,0,0.253359865475099,0,0.5709193985953,2.33044095282455,1.7813056687779,1.04091196059682,0.608930956624282,0.691846491768175,0.753613202763113,0.940709657085638,0.502666365318702,0.247194967734374,0.289198713839823,3.5384422077995,1.45590164952668,2.87093973998512,1.93950101254089,0,0.292780797011547,1.04723353406728,0.255457055208591,2.99537811264801,3.59941638596045,1.39777249780371,1.79748767285787,1.37250180845588,4.14659361972453,13.3844726548053,13.2972037811772,2.28566849015516,4.2182728397617,1.32391173005411,1.24406970610093,0,1.26265113531884,0.130120442962704,0.229902104433473,0.180062129805349,0,0.272145996605311,0.512454881139399,0.655912071918102,0.258703370739016,0,0.189106080167819,0.351902248327898,0.219195732427575,0,0.348252166522167,0.61734640922383,0.59710280045548,0.702213187313235,1.02939162845886,0.852490498186778,0.621377317606506,0.469052119962192,0.180062061461015,0.710234206755631,0.590292695242212,0.308534225774757,0,0.804820204198858,0.350296027101508,0.987359099480883,0.492502392237286,0.56748166682099,0.438599962275997,0.439100230582101,0,6.09840850835969,2.16099685996497,0,0.264450566663544,0.213288250535234,0.696710015581316,0.644337306610467,0.403367049246685,1.55664630691409,0.570676878337677,0.474529061544512,0.494096864172033,0.754005626400808,0.198956472041151,0.974820435595601,0,0,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0.350679099451593,0.379419222745544,0.295220295959204,0.627994911365499,0,0,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0.763877555344259,0.287696137450811,0.648540907100142,0.274561413188081,0,0,0.62407534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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2282 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:119705371..119705471,+ | |||
|description=CAGE_peak_at_chr4:119705371..119705471,+ | |||
|id=chr4:119705371..119705471,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.47e-07,9;CL:0000789,4.47e-07,9;CL:0002420,4.47e-07,9;CL:0002419,4.47e-07,9;CL:0000790,4.47e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!2.23e-11!41;UBERON:0001004!4.18e-11!42;UBERON:0002193!6.02e-11!48;UBERON:0002390!6.45e-11!45;UBERON:0003061!6.45e-11!45;UBERON:0006562!1.33e-10!24;UBERON:0001557!1.33e-10!24;UBERON:0001042!1.33e-10!24;UBERON:0008814!1.33e-10!24;UBERON:0009145!1.33e-10!24;UBERON:0002370!2.52e-10!23;UBERON:0000974!2.52e-10!23;UBERON:0004807!2.52e-10!23;UBERON:0005058!2.52e-10!23;UBERON:0003351!2.52e-10!23;UBERON:0009113!2.52e-10!23;UBERON:0003295!2.52e-10!23;UBERON:0009722!2.52e-10!23;UBERON:0005562!2.52e-10!23;UBERON:0007690!2.52e-10!23;UBERON:0004177!5.89e-10!29;UBERON:0003408!6.68e-10!24;UBERON:0007811!4.68e-08!86;UBERON:0000072!6.84e-08!27;UBERON:0002021!1.12e-07!10;UBERON:0000411!1.12e-07!10;UBERON:0001950!1.12e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,4.82e-15,41;UBERON:0001004,2.46e-14,42;UBERON:0006562,5.63e-14,24;UBERON:0001557,5.63e-14,24;UBERON:0001042,5.63e-14,24;UBERON:0008814,5.63e-14,24;UBERON:0009145,5.63e-14,24;UBERON:0002370,1.24e-13,23;UBERON:0000974,1.24e-13,23;UBERON:0004807,1.24e-13,23;UBERON:0005058,1.24e-13,23;UBERON:0003351,1.24e-13,23;UBERON:0009113,1.24e-13,23;UBERON:0003295,1.24e-13,23;UBERON:0009722,1.24e-13,23;UBERON:0005562,1.24e-13,23;UBERON:0007690,1.24e-13,23;UBERON:0002390,1.08e-12,45;UBERON:0003061,1.08e-12,45;UBERON:0003408,1.19e-12,24;UBERON:0004177,2.32e-12,29;UBERON:0005057,2.32e-12,29;UBERON:0002193,6.08e-12,48;UBERON:0002405,6.08e-12,48;UBERON:0000072,2.67e-11,27;UBERON:0000077,9.56e-10,35;UBERON:0002021,2.96e-09,10;UBERON:0000411,2.96e-09,10;UBERON:0001950,2.96e-09,10;UBERON:0002619,5.43e-07,17;UBERON:0001016,5.75e-07,75;UBERON:0011216,8.84e-07,194;UBERON:0007811,9.11e-07,36 | |||
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| |||
|short_description=p@chr4:119705371..119705471,+ | |||
}} |
Latest revision as of 16:22, 4 August 2015
Short description: | p@chr4:119705371..119705471, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:119705371..119705471, + |
Coexpression cluster: | MCL_coexpression_mm9:2282 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.47e-07 | 9 |
alpha-beta T cell | 4.47e-07 | 9 |
immature T cell | 4.47e-07 | 9 |
mature T cell | 4.47e-07 | 9 |
immature alpha-beta T cell | 4.47e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
respiratory tract | 4.82e-15 | 41 |
respiratory system | 2.46e-14 | 42 |
pharynx | 5.63e-14 | 24 |
upper respiratory tract | 5.63e-14 | 24 |
chordate pharynx | 5.63e-14 | 24 |
pharyngeal arch system | 5.63e-14 | 24 |
pharyngeal region of foregut | 5.63e-14 | 24 |
thymus | 1.24e-13 | 23 |
neck | 1.24e-13 | 23 |
respiratory system epithelium | 1.24e-13 | 23 |
hemolymphoid system gland | 1.24e-13 | 23 |
pharyngeal epithelium | 1.24e-13 | 23 |
thymic region | 1.24e-13 | 23 |
pharyngeal gland | 1.24e-13 | 23 |
entire pharyngeal arch endoderm | 1.24e-13 | 23 |
thymus primordium | 1.24e-13 | 23 |
early pharyngeal endoderm | 1.24e-13 | 23 |
hematopoietic system | 1.08e-12 | 45 |
blood island | 1.08e-12 | 45 |
gland of gut | 1.19e-12 | 24 |
hemopoietic organ | 2.32e-12 | 29 |
immune organ | 2.32e-12 | 29 |
hemolymphoid system | 6.08e-12 | 48 |
immune system | 6.08e-12 | 48 |
segment of respiratory tract | 2.67e-11 | 27 |
mixed endoderm/mesoderm-derived structure | 9.56e-10 | 35 |
occipital lobe | 2.96e-09 | 10 |
visual cortex | 2.96e-09 | 10 |
neocortex | 2.96e-09 | 10 |
regional part of cerebral cortex | 5.43e-07 | 17 |
nervous system | 5.75e-07 | 75 |
organ system subdivision | 8.84e-07 | 194 |
craniocervical region | 9.11e-07 | 36 |