FFCP PHASE1:Mm9::chr17:35137753..35137781,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=3095|UniProt=G3UZE5|association_with_transcript=-14bp_to_ENSMUST00000174517_5end|description=CAGE_peak_2_at_ENSMUST00000174517_5end|id=chr17:35137753..35137781,-|ontology_enrichment_celltype=CL:0000221!5.77e-20!44;CL:0000133!5.77e-20!44;CL:0002319!2.14e-19!43;CL:0000055!1.60e-17!50;CL:0000540!2.88e-13!33;CL:0000047!2.88e-13!33;CL:0000031!2.88e-13!33;CL:0000404!2.88e-13!33;CL:0000393!2.16e-12!39;CL:0000211!2.16e-12!39;CL:0000107!3.54e-08!9;CL:0002321!4.90e-08!70;CL:0000220!4.90e-08!70;CL:0000117!6.46e-08!23;CL:0000337!6.46e-08!23;CL:0000333!2.81e-07!10;CL:0000095!2.81e-07!10;CL:0000243!2.81e-07!10;CL:0000123!2.81e-07!10;CL:0000125!2.81e-07!10;CL:0000030!2.81e-07!10;CL:0000339!2.81e-07!10|ontology_enrichment_celltype_v019_2=CL:0000221,2.94e-41,44;CL:0000133,2.94e-41,44;CL:0002319,5.93e-40,43;CL:0000540,5.16e-28,33;CL:0000047,5.16e-28,33;CL:0000031,5.16e-28,33;CL:0000404,5.16e-28,33;CL:0000393,5.66e-27,39;CL:0000211,5.66e-27,39;CL:0002321,1.15e-25,70;CL:0000107,8.34e-17,9;CL:0000117,5.77e-15,23;CL:0000337,5.77e-15,23;CL:0000723,1.69e-14,91;CL:0000048,1.69e-14,91;CL:0000034,5.03e-13,97;CL:0000333,2.64e-12,10;CL:0000095,2.64e-12,10;CL:0000243,2.64e-12,10;CL:0000123,2.64e-12,10;CL:0000125,2.64e-12,10;CL:0000030,2.64e-12,10;CL:0000339,2.64e-12,10;CL:0002609,5.11e-11,6;CL:0002453,2.35e-09,8;CL:0000128,5.19e-07,6;CL:0000126,5.19e-07,6;CL:0000127,5.19e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.67e-09!11;UBERON:0002410!3.54e-08!9;UBERON:0004121!4.83e-08!102;UBERON:0000924!4.83e-08!102;UBERON:0006601!4.83e-08!102;UBERON:0000073!1.35e-07!75;UBERON:0001016!1.35e-07!75;UBERON:0001017!9.65e-07!73;UBERON:0005743!9.65e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.25e-21,75;UBERON:0004121,1.50e-20,95;UBERON:0000924,1.50e-20,95;UBERON:0006601,1.50e-20,95;UBERON:0000010,7.38e-20,11;UBERON:0001017,4.32e-19,73;UBERON:0002410,8.34e-17,9;UBERON:0002346,9.78e-10,64;UBERON:0003075,9.78e-10,64;UBERON:0007284,9.78e-10,64;UBERON:0010371,1.35e-08,73;UBERON:0010314,5.54e-07,92;UBERON:0010313,6.50e-07,3;UBERON:0002342,6.50e-07,3;UBERON:0002005,6.50e-07,3;UBERON:0005428,6.50e-07,3;UBERON:0005062,6.50e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0.171217968225505,0.239316476986009,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,1.27006134691926,1.23012957516914,0,0,0.166234645358492,0,0,0,0,0,0,0.485510353031154,0,0,0,3.12956537739216,6.32272953503295,1.31811709640683,0.972149495371417,5.73944328663986,11.5002051491977,0.167782606057736,0,0,5.65970759279083,5.15760191889762,0.515672092277442,2.63011399117477,4.23192783417626,3.1691570175309,5.08266798103698,1.77858959222228,4.04954872776629,0.988866362566974,2.1314403448383,2.69640099466564,1.53687322128622,10.2652716185393,7.96535036156975,9.04397333810943,0.285650984403804,3.09215957332259,7.7169203505421,14.7602025368084,7.35375029288017,0,0.255374676170375,0,2.50583946687368,2.65314166446988,1.04182674111352,0.279182999001381,0,0.15279824777681,1.47314292736834,2.42031857358475,2.98239113320481,3.71058347332602,11.7891633766585,0,0,0,0,0,0,0,0.852151612890289,0.779358013808606,0.35333957451034,1.83096445709685,0,0,0,0,0,0,0,0,0.148442139064825,0.867426633830679,0,0.461230994512117,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,2.60240885925407,2.06911893990126,1.80062129805349,0.753524089178575,0.680364991513279,1.0249097622788,0.843315521037559,0,3.01795190105979,0.945530400839096,0.527853372491847,0.219195732427575,0.278047249225598,0,0.61734640922383,1.19420560091096,0,0,0,0.828503090142008,0.234526059981096,0.36012412292203,0.473489471170421,0,0.154267112887378,0.465067889500816,0,0.116765342367169,0,0,0,0,0,0,0,0.205809224758569,0,0,0.853153002140936,0.696710015581316,0.38660238396628,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,2.0863469104839,1.48523066392647,0,0.407302655690628,0,0.280543279561274,0.189709611372772,0.147610147979602,0.31399745568275,0,0,0.667380422864376,0.393117990226406,0.449724224769707,0.608580364165509,0,0,0.575392274901621,0.324270453550071,0,0,0,0,0,0.179397413521912,0,0,0.947457058852424,0.651859905768103,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,15.7377547561608,0,17.6684602873104,23.4263246577983,18.5264122050207,14.8160654730582,10.4715376818725,9.90767857760913,17.8116708736954,11.9824901743638,7.90575555893047,0,0,0,0,0,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,1.08036656418786,1.29358683782755,0.857348140126369,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.241251699712623,0.238744688006273,0.164140899745061,0,0,0,0.619160603889667,0.740778109478847,0.188368457004691,0.410082683163076,0,0.169978429993855,0,0,0,1.58167996790568,1.01659733563424,0.108005340821801,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,0,0.56369293868419,1.04661582230785,0.496375471371293,0.972255941720238,0.387479470433193,0.506868376472335,0.117357238645754,0.781226309063701,0.524296722128554,0.483168241652012,0.288030006257865,0.632022241256357,0,0.102710957164827,0,0.358053391334963,0.39736270956253,0.240390899039938,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.194915761479505,0.288635524920988,0.116876902181569,0,0.665957860122194,0.717710852875806,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830298780673413,0.399024873401031,0.682934423016537,0.243106717068294,0,0.183843508450014,0,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0,0.187283014939765,0.256100609619477,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0.476872379894642,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0.394017929502254,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p2@ENSMUST00000174517}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=3095 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UZE5 | |||
|association_with_transcript=-14bp_to_ENSMUST00000174517_5end | |||
|cluster_id=chr17:35137753..35137781,- | |||
|description=CAGE_peak_2_at_ENSMUST00000174517_5end | |||
|id=chr17:35137753..35137781,- | |||
|ontology_enrichment_celltype=CL:0000221!5.77e-20!44;CL:0000133!5.77e-20!44;CL:0002319!2.14e-19!43;CL:0000055!1.60e-17!50;CL:0000540!2.88e-13!33;CL:0000047!2.88e-13!33;CL:0000031!2.88e-13!33;CL:0000404!2.88e-13!33;CL:0000393!2.16e-12!39;CL:0000211!2.16e-12!39;CL:0000107!3.54e-08!9;CL:0002321!4.90e-08!70;CL:0000220!4.90e-08!70;CL:0000117!6.46e-08!23;CL:0000337!6.46e-08!23;CL:0000333!2.81e-07!10;CL:0000095!2.81e-07!10;CL:0000243!2.81e-07!10;CL:0000123!2.81e-07!10;CL:0000125!2.81e-07!10;CL:0000030!2.81e-07!10;CL:0000339!2.81e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.94e-41,44;CL:0000133,2.94e-41,44;CL:0002319,5.93e-40,43;CL:0000540,5.16e-28,33;CL:0000047,5.16e-28,33;CL:0000031,5.16e-28,33;CL:0000404,5.16e-28,33;CL:0000393,5.66e-27,39;CL:0000211,5.66e-27,39;CL:0002321,1.15e-25,70;CL:0000107,8.34e-17,9;CL:0000117,5.77e-15,23;CL:0000337,5.77e-15,23;CL:0000723,1.69e-14,91;CL:0000048,1.69e-14,91;CL:0000034,5.03e-13,97;CL:0000333,2.64e-12,10;CL:0000095,2.64e-12,10;CL:0000243,2.64e-12,10;CL:0000123,2.64e-12,10;CL:0000125,2.64e-12,10;CL:0000030,2.64e-12,10;CL:0000339,2.64e-12,10;CL:0002609,5.11e-11,6;CL:0002453,2.35e-09,8;CL:0000128,5.19e-07,6;CL:0000126,5.19e-07,6;CL:0000127,5.19e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.67e-09!11;UBERON:0002410!3.54e-08!9;UBERON:0004121!4.83e-08!102;UBERON:0000924!4.83e-08!102;UBERON:0006601!4.83e-08!102;UBERON:0000073!1.35e-07!75;UBERON:0001016!1.35e-07!75;UBERON:0001017!9.65e-07!73;UBERON:0005743!9.65e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.25e-21,75;UBERON:0004121,1.50e-20,95;UBERON:0000924,1.50e-20,95;UBERON:0006601,1.50e-20,95;UBERON:0000010,7.38e-20,11;UBERON:0001017,4.32e-19,73;UBERON:0002410,8.34e-17,9;UBERON:0002346,9.78e-10,64;UBERON:0003075,9.78e-10,64;UBERON:0007284,9.78e-10,64;UBERON:0010371,1.35e-08,73;UBERON:0010314,5.54e-07,92;UBERON:0010313,6.50e-07,3;UBERON:0002342,6.50e-07,3;UBERON:0002005,6.50e-07,3;UBERON:0005428,6.50e-07,3;UBERON:0005062,6.50e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0.171217968225505,0.239316476986009,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,1.27006134691926,1.23012957516914,0,0,0.166234645358492,0,0,0,0,0,0,0.485510353031154,0,0,0,3.12956537739216,6.32272953503295,1.31811709640683,0.972149495371417,5.73944328663986,11.5002051491977,0.167782606057736,0,0,5.65970759279083,5.15760191889762,0.515672092277442,2.63011399117477,4.23192783417626,3.1691570175309,5.08266798103698,1.77858959222228,4.04954872776629,0.988866362566974,2.1314403448383,2.69640099466564,1.53687322128622,10.2652716185393,7.96535036156975,9.04397333810943,0.285650984403804,3.09215957332259,7.7169203505421,14.7602025368084,7.35375029288017,0,0.255374676170375,0,2.50583946687368,2.65314166446988,1.04182674111352,0.279182999001381,0,0.15279824777681,1.47314292736834,2.42031857358475,2.98239113320481,3.71058347332602,11.7891633766585,0,0,0,0,0,0,0,0.852151612890289,0.779358013808606,0.35333957451034,1.83096445709685,0,0,0,0,0,0,0,0,0.148442139064825,0.867426633830679,0,0.461230994512117,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,2.60240885925407,2.06911893990126,1.80062129805349,0.753524089178575,0.680364991513279,1.0249097622788,0.843315521037559,0,3.01795190105979,0.945530400839096,0.527853372491847,0.219195732427575,0.278047249225598,0,0.61734640922383,1.19420560091096,0,0,0,0.828503090142008,0.234526059981096,0.36012412292203,0.473489471170421,0,0.154267112887378,0.465067889500816,0,0.116765342367169,0,0,0,0,0,0,0,0.205809224758569,0,0,0.853153002140936,0.696710015581316,0.38660238396628,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,2.0863469104839,1.48523066392647,0,0.407302655690628,0,0.280543279561274,0.189709611372772,0.147610147979602,0.31399745568275,0,0,0.667380422864376,0.393117990226406,0.449724224769707,0.608580364165509,0,0,0.575392274901621,0.324270453550071,0,0,0,0,0,0.179397413521912,0,0,0.947457058852424,0.651859905768103,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,15.7377547561608,0,17.6684602873104,23.4263246577983,18.5264122050207,14.8160654730582,10.4715376818725,9.90767857760913,17.8116708736954,11.9824901743638,7.90575555893047,0,0,0,0,0,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,1.08036656418786,1.29358683782755,0.857348140126369,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.241251699712623,0.238744688006273,0.164140899745061,0,0,0,0.619160603889667,0.740778109478847,0.188368457004691,0.410082683163076,0,0.169978429993855,0,0,0,1.58167996790568,1.01659733563424,0.108005340821801,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,0,0.56369293868419,1.04661582230785,0.496375471371293,0.972255941720238,0.387479470433193,0.506868376472335,0.117357238645754,0.781226309063701,0.524296722128554,0.483168241652012,0.288030006257865,0.632022241256357,0,0.102710957164827,0,0.358053391334963,0.39736270956253,0.240390899039938,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.194915761479505,0.288635524920988,0.116876902181569,0,0.665957860122194,0.717710852875806,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830298780673413,0.399024873401031,0.682934423016537,0.243106717068294,0,0.183843508450014,0,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0,0.187283014939765,0.256100609619477,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0.476872379894642,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0.394017929502254,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p2@ENSMUST00000174517 | |||
}} |
Revision as of 18:24, 4 August 2015
Short description: | p2@ENSMUST00000174517 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000174517_5end |
Coexpression cluster: | MCL_coexpression_mm9:3095 |
Association with transcript: | -14bp_to_ENSMUST00000174517_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.94e-41 | 44 |
neurectodermal cell | 2.94e-41 | 44 |
neural cell | 5.93e-40 | 43 |
neuron | 5.16e-28 | 33 |
neuronal stem cell | 5.16e-28 | 33 |
neuroblast | 5.16e-28 | 33 |
electrically signaling cell | 5.16e-28 | 33 |
electrically responsive cell | 5.66e-27 | 39 |
electrically active cell | 5.66e-27 | 39 |
embryonic cell | 1.15e-25 | 70 |
autonomic neuron | 8.34e-17 | 9 |
CNS neuron (sensu Vertebrata) | 5.77e-15 | 23 |
neuroblast (sensu Vertebrata) | 5.77e-15 | 23 |
somatic stem cell | 1.69e-14 | 91 |
multi fate stem cell | 1.69e-14 | 91 |
stem cell | 5.03e-13 | 97 |
migratory neural crest cell | 2.64e-12 | 10 |
neuron associated cell | 2.64e-12 | 10 |
glial cell (sensu Vertebrata) | 2.64e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 2.64e-12 | 10 |
glial cell | 2.64e-12 | 10 |
glioblast | 2.64e-12 | 10 |
glioblast (sensu Vertebrata) | 2.64e-12 | 10 |
neuron of cerebral cortex | 5.11e-11 | 6 |
oligodendrocyte precursor cell | 2.35e-09 | 8 |
oligodendrocyte | 5.19e-07 | 6 |
macroglial cell | 5.19e-07 | 6 |
astrocyte | 5.19e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.25e-21 | 75 |
ectoderm-derived structure | 1.50e-20 | 95 |
ectoderm | 1.50e-20 | 95 |
presumptive ectoderm | 1.50e-20 | 95 |
peripheral nervous system | 7.38e-20 | 11 |
central nervous system | 4.32e-19 | 73 |
autonomic nervous system | 8.34e-17 | 9 |
neurectoderm | 9.78e-10 | 64 |
neural plate | 9.78e-10 | 64 |
presumptive neural plate | 9.78e-10 | 64 |
ecto-epithelium | 1.35e-08 | 73 |
structure with developmental contribution from neural crest | 5.54e-07 | 92 |
neural crest-derived structure | 6.50e-07 | 3 |
neural crest | 6.50e-07 | 3 |
enteric nervous system | 6.50e-07 | 3 |
vagal neural crest | 6.50e-07 | 3 |
neural fold | 6.50e-07 | 3 |