FFCP PHASE1:Mm9::chr15:38591669..38591736,+: Difference between revisions
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{{FFCP|EntrezGene=66335|HGNC=|MCL_coexpression_id=1|UniProt=Q9Z1G3|association_with_transcript=10bp_to_ENSMUST00000022904,NM_025494,uc007vnv.2_5end|description=CAGE_peak_1_at_Atp6v1c1_5end|id=chr15:38591669..38591736,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.12e-08!75;UBERON:0001016!2.12e-08!75;UBERON:0007023!2.96e-08!51;UBERON:0002020!3.79e-08!34;UBERON:0002021!5.67e-08!10;UBERON:0000411!5.67e-08!10;UBERON:0001950!5.67e-08!10;UBERON:0001017!1.17e-07!73;UBERON:0005743!1.17e-07!73;UBERON:0001049!4.40e-07!52;UBERON:0005068!4.40e-07!52;UBERON:0006241!4.40e-07!52;UBERON:0007135!4.40e-07!52;UBERON:0004121!6.99e-07!102;UBERON:0000924!6.99e-07!102;UBERON:0006601!6.99e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.12e-08,75;UBERON:0007023,2.96e-08,51;UBERON:0002020,3.79e-08,34;UBERON:0000073,4.82e-08,54;UBERON:0002021,5.67e-08,10;UBERON:0000411,5.67e-08,10;UBERON:0001950,5.67e-08,10;UBERON:0001017,1.17e-07,73;UBERON:0004121,2.34e-07,95;UBERON:0000924,2.34e-07,95;UBERON:0006601,2.34e-07,95;UBERON:0001049,4.40e-07,52;UBERON:0005068,4.40e-07,52;UBERON:0006241,4.40e-07,52;UBERON:0007135,4.40e-07,52|phase1_expression=25.1433689954527,71.1909831584297,75.0748744992734,31.1538137646035,30.5546395267272,44.6558863285627,49.2922671656559,26.21203465864,19.2880549347783,17.7889040004715,30.9904522488164,31.5100028031579,28.7617226284426,27.8871083716602,27.9812199925157,18.8301998672538,26.5833513688696,29.8111746263535,32.0847774637429,33.5267824920444,54.85292214744,21.2482635569895,21.9407822876706,53.2774767902044,56.4346831425238,76.9470831914127,96.9214491357918,91.3598026588169,29.0735831768252,34.5281277771105,60.9758904302088,22.8611042445467,18.4519436275371,0,16.4645423258227,21.942973187321,17.7627339948261,44.3643528581122,60.1628215283326,53.9229456293012,43.5291301142951,55.3266842816341,59.2322630698007,49.2256558284507,53.9325274087817,42.9499400058335,13.3006528539167,10.9012578190223,17.1355222532888,23.1371579898397,15.818465643666,12.9377307928474,36.912173332702,17.4086914082723,18.821252751978,30.6138728882777,40.1146815914259,41.2537673821954,28.7289374420629,26.4495489636016,28.5224131577781,11.5207140903505,13.3394219416671,35.995988691256,38.565788140112,37.6554460921433,13.7816050838466,10.7581125490035,24.1596796678753,19.5758610580951,22.9254207873006,56.5588949119531,59.6345060569356,24.6206506422058,18.3064849644831,19.3035945188104,145.352962919193,140.328384555621,137.477847264338,26.2453712583086,25.5250525650723,36.4639359389732,123.678068557612,142.941702948047,134.309659795816,66.2914317315752,68.4807784643685,50.5142498186565,97.080979853142,63.1778242492727,26.6675329605544,43.8816177260507,33.3185953516798,33.4615978815447,29.2399387851451,35.3941240806895,28.0888840263504,36.1312283865482,38.1885426766217,45.5808051118339,24.0842247818124,46.1975318691544,68.7974147207943,56.8853362522665,33.5561113567382,31.4166233189122,33.3646133709757,36.5388415100992,31.3314839213078,40.8215882428268,18.0424739836781,17.0500667854799,23.0615497256059,25.3214036128406,26.1046929841265,34.3069794330014,39.0568049020311,30.3658649531814,27.4229271104461,30.5739346400603,30.0344465106135,26.6681389224372,14.9113408974498,76.1230072230023,85.8731497935166,24.0129631896076,17.6128233023703,20.9965955847693,18.5522531526674,133.313669070292,95.1601253862743,38.8271948028751,165.306928502855,161.356453575439,111.789967973043,123.627842457631,19.8586759508117,31.5993705349636,40.435641349388,44.403231592046,16.1349349273753,20.2313851901456,17.2859644613135,24.2634756715501,23.8808112021161,24.4697205744063,29.7971484099938,40.8751325767645,13.7963515477019,13.0483195315795,11.6127741948206,17.3164628617784,13.0682207136031,17.4126083261083,19.3435208223467,14.52950147775,23.87524836865,22.1319200118655,25.5747149456033,22.7838349789052,16.8858763186389,24.488440358698,18.9395788468168,25.5793501271625,23.2943340459941,26.7414036462969,34.0707219777516,33.8619492864792,32.4182904329557,30.6993157827908,33.9678311997136,42.690396328197,29.6392655642918,37.0409715778626,139.842815795145,31.9004298375782,31.3897843834608,24.5939026997096,14.5036010363959,15.3276203427889,16.1084326652617,26.6222252502812,28.9091456998331,43.561668379776,27.9972146311262,33.1044898995262,37.7002813200404,25.6653848933085,33.1438948102504,17.0775687644302,27.0172562343368,24.6935178835415,14.6044283733873,15.994791765362,7.88954149711563,17.7176655225423,23.2742984601151,28.8959577948112,32.440343544744,43.8402139499418,49.1406018143503,47.2611137820496,33.4991468608478,18.3529616287703,19.4593405162071,19.7878658898671,20.0831520174618,18.3294641411837,17.0599320693551,24.4541716833189,27.400853324981,26.6324570792439,27.3159592401974,23.4448797031157,28.7074659265396,30.8146231095476,30.8563551257689,23.1572890254416,26.9739657643243,14.4013472945568,16.1335326677606,10.18470514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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66335 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z1G3 | |||
|association_with_transcript=10bp_to_ENSMUST00000022904,NM_025494,uc007vnv.2_5end | |||
|cluster_id=chr15:38591669..38591736,+ | |||
|description=CAGE_peak_1_at_Atp6v1c1_5end | |||
|id=chr15:38591669..38591736,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.12e-08!75;UBERON:0001016!2.12e-08!75;UBERON:0007023!2.96e-08!51;UBERON:0002020!3.79e-08!34;UBERON:0002021!5.67e-08!10;UBERON:0000411!5.67e-08!10;UBERON:0001950!5.67e-08!10;UBERON:0001017!1.17e-07!73;UBERON:0005743!1.17e-07!73;UBERON:0001049!4.40e-07!52;UBERON:0005068!4.40e-07!52;UBERON:0006241!4.40e-07!52;UBERON:0007135!4.40e-07!52;UBERON:0004121!6.99e-07!102;UBERON:0000924!6.99e-07!102;UBERON:0006601!6.99e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.12e-08,75;UBERON:0007023,2.96e-08,51;UBERON:0002020,3.79e-08,34;UBERON:0000073,4.82e-08,54;UBERON:0002021,5.67e-08,10;UBERON:0000411,5.67e-08,10;UBERON:0001950,5.67e-08,10;UBERON:0001017,1.17e-07,73;UBERON:0004121,2.34e-07,95;UBERON:0000924,2.34e-07,95;UBERON:0006601,2.34e-07,95;UBERON:0001049,4.40e-07,52;UBERON:0005068,4.40e-07,52;UBERON:0006241,4.40e-07,52;UBERON:0007135,4.40e-07,52 | |||
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| |||
|short_description=p1@Atp6v1c1 | |||
}} |
Revision as of 05:46, 5 August 2015
Short description: | p1@Atp6v1c1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Atp6v1c1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 10bp_to_ENSMUST00000022904, NM_025494, uc007vnv.2_5end |
EntrezGene: | 66335 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.12e-08 | 75 |
adult organism | 2.96e-08 | 51 |
gray matter | 3.79e-08 | 34 |
regional part of nervous system | 4.82e-08 | 54 |
occipital lobe | 5.67e-08 | 10 |
visual cortex | 5.67e-08 | 10 |
neocortex | 5.67e-08 | 10 |
central nervous system | 1.17e-07 | 73 |
ectoderm-derived structure | 2.34e-07 | 95 |
ectoderm | 2.34e-07 | 95 |
presumptive ectoderm | 2.34e-07 | 95 |
neural tube | 4.40e-07 | 52 |
neural rod | 4.40e-07 | 52 |
future spinal cord | 4.40e-07 | 52 |
neural keel | 4.40e-07 | 52 |