FFCP PHASE1:Mm9::chr13:105410279..105410284,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=68|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:105410279..105410284,+|id=chr13:105410279..105410284,+|ontology_enrichment_celltype=CL:0000893!1.13e-15!6;CL:0002489!1.13e-15!6;CL:0000898!1.13e-15!6;CL:0000809!1.13e-15!6;CL:0000810!1.13e-15!6;CL:0000895!1.13e-15!6;CL:0000808!1.13e-15!6;CL:0000894!1.13e-15!6;CL:0000806!1.13e-15!6;CL:0000807!1.13e-15!6;CL:0000805!1.13e-15!6;CL:0002425!1.13e-15!6;CL:0002436!1.13e-15!6;CL:0002427!1.13e-15!6;CL:0002428!1.13e-15!6;CL:0002429!1.13e-15!6;CL:0002433!1.13e-15!6;CL:0002431!1.13e-15!6;CL:0002432!1.13e-15!6;CL:0000624!4.89e-12!8;CL:0000791!8.07e-11!9;CL:0000789!8.07e-11!9;CL:0002420!8.07e-11!9;CL:0002419!8.07e-11!9;CL:0000790!8.07e-11!9;CL:0000084!4.82e-09!11;CL:0000827!4.82e-09!11;CL:0000838!2.25e-08!12;CL:0000542!8.31e-08!13;CL:0000051!8.31e-08!13|ontology_enrichment_celltype_v019_2=CL:0000893,6.66e-30,6;CL:0002489,6.66e-30,6;CL:0000898,6.66e-30,6;CL:0000809,6.66e-30,6;CL:0000810,6.66e-30,6;CL:0000895,6.66e-30,6;CL:0000808,6.66e-30,6;CL:0000894,6.66e-30,6;CL:0000806,6.66e-30,6;CL:0000807,6.66e-30,6;CL:0000805,6.66e-30,6;CL:0002425,6.66e-30,6;CL:0002436,6.66e-30,6;CL:0002427,6.66e-30,6;CL:0002428,6.66e-30,6;CL:0002429,6.66e-30,6;CL:0002433,6.66e-30,6;CL:0002431,6.66e-30,6;CL:0002432,6.66e-30,6;CL:0000624,8.41e-23,8;CL:0000791,1.98e-20,9;CL:0000789,1.98e-20,9;CL:0002420,1.98e-20,9;CL:0002419,1.98e-20,9;CL:0000790,1.98e-20,9;CL:0000084,5.67e-17,11;CL:0000827,5.67e-17,11;CL:0000838,1.13e-15,12;CL:0000542,1.42e-14,13;CL:0000051,1.42e-14,13;CL:0000738,1.86e-11,17;CL:0002087,1.86e-11,17;CL:0002031,3.41e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.04e-09!23;UBERON:0000974!2.04e-09!23;UBERON:0004807!2.04e-09!23;UBERON:0005058!2.04e-09!23;UBERON:0003351!2.04e-09!23;UBERON:0009113!2.04e-09!23;UBERON:0003295!2.04e-09!23;UBERON:0009722!2.04e-09!23;UBERON:0005562!2.04e-09!23;UBERON:0007690!2.04e-09!23;UBERON:0006562!4.63e-09!24;UBERON:0003408!4.63e-09!24;UBERON:0001557!4.63e-09!24;UBERON:0001042!4.63e-09!24;UBERON:0008814!4.63e-09!24;UBERON:0009145!4.63e-09!24;UBERON:0000072!3.80e-08!27;UBERON:0004177!1.22e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.45e-09,23;UBERON:0000974,8.45e-09,23;UBERON:0004807,8.45e-09,23;UBERON:0005058,8.45e-09,23;UBERON:0003351,8.45e-09,23;UBERON:0009113,8.45e-09,23;UBERON:0003295,8.45e-09,23;UBERON:0009722,8.45e-09,23;UBERON:0005562,8.45e-09,23;UBERON:0007690,8.45e-09,23;UBERON:0006562,1.75e-08,24;UBERON:0003408,1.75e-08,24;UBERON:0001557,1.75e-08,24;UBERON:0001042,1.75e-08,24;UBERON:0008814,1.75e-08,24;UBERON:0009145,1.75e-08,24;UBERON:0000072,1.12e-07,27;UBERON:0004177,3.14e-07,29;UBERON:0005057,3.14e-07,29|phase1_expression=0,0,0,0,0,0,0,0,6.47628121897667,0,5.47897498321616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:105410279..105410284,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:105410279..105410284,+ | |||
|description=CAGE_peak_at_chr13:105410279..105410284,+ | |||
|id=chr13:105410279..105410284,+ | |||
|ontology_enrichment_celltype=CL:0000893!1.13e-15!6;CL:0002489!1.13e-15!6;CL:0000898!1.13e-15!6;CL:0000809!1.13e-15!6;CL:0000810!1.13e-15!6;CL:0000895!1.13e-15!6;CL:0000808!1.13e-15!6;CL:0000894!1.13e-15!6;CL:0000806!1.13e-15!6;CL:0000807!1.13e-15!6;CL:0000805!1.13e-15!6;CL:0002425!1.13e-15!6;CL:0002436!1.13e-15!6;CL:0002427!1.13e-15!6;CL:0002428!1.13e-15!6;CL:0002429!1.13e-15!6;CL:0002433!1.13e-15!6;CL:0002431!1.13e-15!6;CL:0002432!1.13e-15!6;CL:0000624!4.89e-12!8;CL:0000791!8.07e-11!9;CL:0000789!8.07e-11!9;CL:0002420!8.07e-11!9;CL:0002419!8.07e-11!9;CL:0000790!8.07e-11!9;CL:0000084!4.82e-09!11;CL:0000827!4.82e-09!11;CL:0000838!2.25e-08!12;CL:0000542!8.31e-08!13;CL:0000051!8.31e-08!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,6.66e-30,6;CL:0002489,6.66e-30,6;CL:0000898,6.66e-30,6;CL:0000809,6.66e-30,6;CL:0000810,6.66e-30,6;CL:0000895,6.66e-30,6;CL:0000808,6.66e-30,6;CL:0000894,6.66e-30,6;CL:0000806,6.66e-30,6;CL:0000807,6.66e-30,6;CL:0000805,6.66e-30,6;CL:0002425,6.66e-30,6;CL:0002436,6.66e-30,6;CL:0002427,6.66e-30,6;CL:0002428,6.66e-30,6;CL:0002429,6.66e-30,6;CL:0002433,6.66e-30,6;CL:0002431,6.66e-30,6;CL:0002432,6.66e-30,6;CL:0000624,8.41e-23,8;CL:0000791,1.98e-20,9;CL:0000789,1.98e-20,9;CL:0002420,1.98e-20,9;CL:0002419,1.98e-20,9;CL:0000790,1.98e-20,9;CL:0000084,5.67e-17,11;CL:0000827,5.67e-17,11;CL:0000838,1.13e-15,12;CL:0000542,1.42e-14,13;CL:0000051,1.42e-14,13;CL:0000738,1.86e-11,17;CL:0002087,1.86e-11,17;CL:0002031,3.41e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.04e-09!23;UBERON:0000974!2.04e-09!23;UBERON:0004807!2.04e-09!23;UBERON:0005058!2.04e-09!23;UBERON:0003351!2.04e-09!23;UBERON:0009113!2.04e-09!23;UBERON:0003295!2.04e-09!23;UBERON:0009722!2.04e-09!23;UBERON:0005562!2.04e-09!23;UBERON:0007690!2.04e-09!23;UBERON:0006562!4.63e-09!24;UBERON:0003408!4.63e-09!24;UBERON:0001557!4.63e-09!24;UBERON:0001042!4.63e-09!24;UBERON:0008814!4.63e-09!24;UBERON:0009145!4.63e-09!24;UBERON:0000072!3.80e-08!27;UBERON:0004177!1.22e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.45e-09,23;UBERON:0000974,8.45e-09,23;UBERON:0004807,8.45e-09,23;UBERON:0005058,8.45e-09,23;UBERON:0003351,8.45e-09,23;UBERON:0009113,8.45e-09,23;UBERON:0003295,8.45e-09,23;UBERON:0009722,8.45e-09,23;UBERON:0005562,8.45e-09,23;UBERON:0007690,8.45e-09,23;UBERON:0006562,1.75e-08,24;UBERON:0003408,1.75e-08,24;UBERON:0001557,1.75e-08,24;UBERON:0001042,1.75e-08,24;UBERON:0008814,1.75e-08,24;UBERON:0009145,1.75e-08,24;UBERON:0000072,1.12e-07,27;UBERON:0004177,3.14e-07,29;UBERON:0005057,3.14e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,6.47628121897667,0,5.47897498321616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:105410279..105410284,+ | |||
}} |
Latest revision as of 13:42, 5 August 2015
Short description: | p@chr13:105410279..105410284, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:105410279..105410284, + |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 8.45e-09 | 23 |
neck | 8.45e-09 | 23 |
respiratory system epithelium | 8.45e-09 | 23 |
hemolymphoid system gland | 8.45e-09 | 23 |
pharyngeal epithelium | 8.45e-09 | 23 |
thymic region | 8.45e-09 | 23 |
pharyngeal gland | 8.45e-09 | 23 |
entire pharyngeal arch endoderm | 8.45e-09 | 23 |
thymus primordium | 8.45e-09 | 23 |
early pharyngeal endoderm | 8.45e-09 | 23 |
pharynx | 1.75e-08 | 24 |
gland of gut | 1.75e-08 | 24 |
upper respiratory tract | 1.75e-08 | 24 |
chordate pharynx | 1.75e-08 | 24 |
pharyngeal arch system | 1.75e-08 | 24 |
pharyngeal region of foregut | 1.75e-08 | 24 |
segment of respiratory tract | 1.12e-07 | 27 |
hemopoietic organ | 3.14e-07 | 29 |
immune organ | 3.14e-07 | 29 |