Personal tools

FFCP PHASE1:Mm9::chr11:18785822..18785848,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 1: Line 1:
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=96|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:18785822..18785848,-|id=chr11:18785822..18785848,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,8.59e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!4.44e-08!47;UBERON:0002107!8.27e-08!22;UBERON:0007499!8.27e-08!22;UBERON:0006925!8.27e-08!22;UBERON:0009497!8.27e-08!22;UBERON:0000015!8.27e-08!22;UBERON:0002423!8.27e-08!22;UBERON:0006235!8.27e-08!22;UBERON:0008835!8.27e-08!22;UBERON:0003894!8.27e-08!22;UBERON:0004161!8.27e-08!22;UBERON:0008836!8.27e-08!22;UBERON:0000991!1.23e-07!18;UBERON:0005564!1.23e-07!18;UBERON:0009854!3.94e-07!23;UBERON:0009856!3.94e-07!23;UBERON:0001048!4.75e-07!147;UBERON:0004176!4.95e-07!17;UBERON:0009196!4.95e-07!17;UBERON:0009117!4.95e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.63e-17,22;UBERON:0007499,2.63e-17,22;UBERON:0006925,2.63e-17,22;UBERON:0009497,2.63e-17,22;UBERON:0000015,2.63e-17,22;UBERON:0002423,2.63e-17,22;UBERON:0006235,2.63e-17,22;UBERON:0008835,2.63e-17,22;UBERON:0003894,2.63e-17,22;UBERON:0004161,2.63e-17,22;UBERON:0008836,2.63e-17,22;UBERON:0009854,2.23e-16,23;UBERON:0009856,2.23e-16,23;UBERON:0002365,9.52e-15,25;UBERON:0002330,9.52e-15,25;UBERON:0005256,5.68e-11,45;UBERON:0000970,9.86e-09,9;UBERON:0000019,9.86e-09,9;UBERON:0000047,9.86e-09,9;UBERON:0010312,9.86e-09,9;UBERON:0004088,9.86e-09,9;UBERON:0002104,9.86e-09,9;UBERON:0001456,9.86e-09,9;UBERON:0003072,9.86e-09,9;UBERON:0004128,9.86e-09,9;UBERON:0003071,9.86e-09,9;UBERON:0003101,1.22e-08,16;UBERON:0000079,1.22e-08,16;UBERON:0005172,1.82e-08,49;UBERON:0005173,1.82e-08,49;UBERON:0002417,1.82e-08,49;UBERON:0000916,1.82e-08,49;UBERON:0000473,5.48e-08,14;UBERON:0000991,2.07e-07,18;UBERON:0005564,2.07e-07,18;UBERON:0003135,2.38e-07,15;UBERON:0001048,4.28e-07,134;UBERON:0003914,5.03e-07,47;UBERON:0001444,5.93e-07,11;UBERON:0003104,7.24e-07,61;UBERON:0009142,7.24e-07,61;UBERON:0002410,8.59e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.17008658030214,3.27660138962921,4.96279599363977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94932925234301,3.58421509677868,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0.346970653532272,0.304465478312141,1.38369298353635,1.05505848386836,1.29347577849275,0.879666139307728,0.247194967734374,0.578397427679647,0,0,0.220841518460394,0,0,0,0,0,0.838705871541442,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.420883711772948,2.08192708740326,2.98872735763515,1.80062129805349,1.65775299619287,1.49680298132921,0.512454881139399,1.3118241438362,1.03481348295606,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,1.99034266818493,0,0,0,0.828503090142008,1.40715635988658,0.720248245844059,0.23674473558521,0.590292695242212,0.308534225774757,0.465067889500816,0.804820204198858,0.116765342367169,0.493679549740441,0.820837320395476,0.162137619091711,0.146199987425332,0,0.268412837520744,0,0,0.330418782983798,0,1.06644125267617,1.16118335930219,1.15980715189884,0.201683524623343,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.280543279561274,0.0632365371242573,0,0,0,0,1.66845105716094,0.982794975566015,1.34917267430912,1.82574109249653,1.20588579876208,0.50925170356284,1.72617682470486,4.86405680325106,3.56929837144506,11.5014565221884,11.5363693777236,8.11297950097858,5.80931419278357,6.27890947326693,6.75420929908714,0.184753190166605,0.757965647081939,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0.327726629431476,0.518054945597687,0,0,0,0,0.275936746304732,0,0,0,0,0.631016438832513,0.390438744296638,0.646270193198397,3.58453196928828,3.56477878531831,1.69845918473299,2.02405350837447,1.16902343164525,1.18586333383957,0,0.709700426041343,0.712262414669021,0.325773918707152,0,0,0,0,0.188605079755898,0,0.922305443831782,0,0,0,0.316036757935816,0,0,0,0.900305470156551,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.704015124191131,0.21183207086382,3.52845436887939,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,0,0,0.412773735926445,0.555583582109135,0,0.136694227721025,0,1.01987057996313,1.53946597556024,0.414599921413271,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.909188012978695,0.26175594198403,0,0,1.69107881605257,2.8408143748356,1.82004339502807,4.4723773319131,0.516639293910924,3.37912250981556,4.69428954583016,7.68205870579306,3.8797957437513,0.483168241652012,0.576060012515731,0.316011120628178,0.810900861160657,0.924398614483445,0.51968329191118,0,0.596044064343795,0.120195449519969,0,0.201932899896295,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.512200817262403,0.243106717068294,0.209613162627982,0,0.666740183404846,0.412070114477788,0.320919209591815,0,0.50695859978048,0.377252682772152,0.37456602987953,0.512201219238954,0.459483751644906,0.476293691283074,0.463537303779422,0,0,0.441596760403192,0,0.532427418478012,0.238436189947321,0,0.376437521661322,0.676916863133412,0.182927972872773,0,0.543216455383447,0,0.593175090620871,0.0985044823755635,0,1.08455788830176,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0|short_description=p@chr11:18785822..18785848,-}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=96
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr11:18785822..18785848,-
|description=CAGE_peak_at_chr11:18785822..18785848,-
|id=chr11:18785822..18785848,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000107,8.59e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!4.44e-08!47;UBERON:0002107!8.27e-08!22;UBERON:0007499!8.27e-08!22;UBERON:0006925!8.27e-08!22;UBERON:0009497!8.27e-08!22;UBERON:0000015!8.27e-08!22;UBERON:0002423!8.27e-08!22;UBERON:0006235!8.27e-08!22;UBERON:0008835!8.27e-08!22;UBERON:0003894!8.27e-08!22;UBERON:0004161!8.27e-08!22;UBERON:0008836!8.27e-08!22;UBERON:0000991!1.23e-07!18;UBERON:0005564!1.23e-07!18;UBERON:0009854!3.94e-07!23;UBERON:0009856!3.94e-07!23;UBERON:0001048!4.75e-07!147;UBERON:0004176!4.95e-07!17;UBERON:0009196!4.95e-07!17;UBERON:0009117!4.95e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.63e-17,22;UBERON:0007499,2.63e-17,22;UBERON:0006925,2.63e-17,22;UBERON:0009497,2.63e-17,22;UBERON:0000015,2.63e-17,22;UBERON:0002423,2.63e-17,22;UBERON:0006235,2.63e-17,22;UBERON:0008835,2.63e-17,22;UBERON:0003894,2.63e-17,22;UBERON:0004161,2.63e-17,22;UBERON:0008836,2.63e-17,22;UBERON:0009854,2.23e-16,23;UBERON:0009856,2.23e-16,23;UBERON:0002365,9.52e-15,25;UBERON:0002330,9.52e-15,25;UBERON:0005256,5.68e-11,45;UBERON:0000970,9.86e-09,9;UBERON:0000019,9.86e-09,9;UBERON:0000047,9.86e-09,9;UBERON:0010312,9.86e-09,9;UBERON:0004088,9.86e-09,9;UBERON:0002104,9.86e-09,9;UBERON:0001456,9.86e-09,9;UBERON:0003072,9.86e-09,9;UBERON:0004128,9.86e-09,9;UBERON:0003071,9.86e-09,9;UBERON:0003101,1.22e-08,16;UBERON:0000079,1.22e-08,16;UBERON:0005172,1.82e-08,49;UBERON:0005173,1.82e-08,49;UBERON:0002417,1.82e-08,49;UBERON:0000916,1.82e-08,49;UBERON:0000473,5.48e-08,14;UBERON:0000991,2.07e-07,18;UBERON:0005564,2.07e-07,18;UBERON:0003135,2.38e-07,15;UBERON:0001048,4.28e-07,134;UBERON:0003914,5.03e-07,47;UBERON:0001444,5.93e-07,11;UBERON:0003104,7.24e-07,61;UBERON:0009142,7.24e-07,61;UBERON:0002410,8.59e-07,9
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.17008658030214,3.27660138962921,4.96279599363977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94932925234301,3.58421509677868,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0.346970653532272,0.304465478312141,1.38369298353635,1.05505848386836,1.29347577849275,0.879666139307728,0.247194967734374,0.578397427679647,0,0,0.220841518460394,0,0,0,0,0,0.838705871541442,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.420883711772948,2.08192708740326,2.98872735763515,1.80062129805349,1.65775299619287,1.49680298132921,0.512454881139399,1.3118241438362,1.03481348295606,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,1.99034266818493,0,0,0,0.828503090142008,1.40715635988658,0.720248245844059,0.23674473558521,0.590292695242212,0.308534225774757,0.465067889500816,0.804820204198858,0.116765342367169,0.493679549740441,0.820837320395476,0.162137619091711,0.146199987425332,0,0.268412837520744,0,0,0.330418782983798,0,1.06644125267617,1.16118335930219,1.15980715189884,0.201683524623343,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.280543279561274,0.0632365371242573,0,0,0,0,1.66845105716094,0.982794975566015,1.34917267430912,1.82574109249653,1.20588579876208,0.50925170356284,1.72617682470486,4.86405680325106,3.56929837144506,11.5014565221884,11.5363693777236,8.11297950097858,5.80931419278357,6.27890947326693,6.75420929908714,0.184753190166605,0.757965647081939,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0.327726629431476,0.518054945597687,0,0,0,0,0.275936746304732,0,0,0,0,0.631016438832513,0.390438744296638,0.646270193198397,3.58453196928828,3.56477878531831,1.69845918473299,2.02405350837447,1.16902343164525,1.18586333383957,0,0.709700426041343,0.712262414669021,0.325773918707152,0,0,0,0,0.188605079755898,0,0.922305443831782,0,0,0,0.316036757935816,0,0,0,0.900305470156551,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.704015124191131,0.21183207086382,3.52845436887939,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,0,0,0.412773735926445,0.555583582109135,0,0.136694227721025,0,1.01987057996313,1.53946597556024,0.414599921413271,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.909188012978695,0.26175594198403,0,0,1.69107881605257,2.8408143748356,1.82004339502807,4.4723773319131,0.516639293910924,3.37912250981556,4.69428954583016,7.68205870579306,3.8797957437513,0.483168241652012,0.576060012515731,0.316011120628178,0.810900861160657,0.924398614483445,0.51968329191118,0,0.596044064343795,0.120195449519969,0,0.201932899896295,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.512200817262403,0.243106717068294,0.209613162627982,0,0.666740183404846,0.412070114477788,0.320919209591815,0,0.50695859978048,0.377252682772152,0.37456602987953,0.512201219238954,0.459483751644906,0.476293691283074,0.463537303779422,0,0,0.441596760403192,0,0.532427418478012,0.238436189947321,0,0.376437521661322,0.676916863133412,0.182927972872773,0,0.543216455383447,0,0.593175090620871,0.0985044823755635,0,1.08455788830176,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0
|short_description=p@chr11:18785822..18785848,-
}}

Latest revision as of 16:45, 5 August 2015

Short description:p@chr11:18785822..18785848, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr11:18785822..18785848, -
Coexpression cluster:MCL_coexpression_mm9:96
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr11:18785822..18785848-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F44.86
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H211.54
liver, neonate N10.CNhs11115.751-24B98.11
liver, neonate N20.CNhs11220.823-25A35.81
liver, neonate N25.CNhs11198.1368-26H16.28
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B74.69
testis, neonate N07.CNhs11222.726-26I47.68
testis, neonate N10.CNhs11204.763-44D93.88
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron8.59e-079

Uber anatomy
Ontology termp-valuen
liver2.63e-1722
epithelial sac2.63e-1722
digestive gland2.63e-1722
epithelium of foregut-midgut junction2.63e-1722
anatomical boundary2.63e-1722
hepatobiliary system2.63e-1722
foregut-midgut junction2.63e-1722
hepatic diverticulum2.63e-1722
liver primordium2.63e-1722
septum transversum2.63e-1722
liver bud2.63e-1722
digestive tract diverticulum2.23e-1623
sac2.23e-1623
exocrine gland9.52e-1525
exocrine system9.52e-1525
trunk mesenchyme5.68e-1145
eye9.86e-099
camera-type eye9.86e-099
simple eye9.86e-099
immature eye9.86e-099
ocular region9.86e-099
visual system9.86e-099
face9.86e-099
optic cup9.86e-099
optic vesicle9.86e-099
eye primordium9.86e-099
male organism1.22e-0816
male reproductive system1.22e-0816
abdomen element1.82e-0849
abdominal segment element1.82e-0849
abdominal segment of trunk1.82e-0849
abdomen1.82e-0849
testis5.48e-0814
gonad2.07e-0718
gonad primordium2.07e-0718
male reproductive organ2.38e-0715
primordium4.28e-07134
epithelial tube5.03e-0747
subdivision of head5.93e-0711
mesenchyme7.24e-0761
entire embryonic mesenchyme7.24e-0761
autonomic nervous system8.59e-079
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:18785822..18785848,-&oldid=3921229"