FFCP PHASE1:Mm9::chr15:86013334..86013346,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=48|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:86013334..86013346,+|id=chr15:86013334..86013346,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,8.35e-13,6;CL:0000556,8.35e-13,6;CL:0002031,1.37e-11,25;CL:0000945,9.82e-10,1;CL:0000236,9.82e-10,1;CL:0000826,9.82e-10,1;CL:0000625,1.73e-09,1;CL:0000815,2.52e-09,1;CL:0000792,2.52e-09,1;CL:0000988,5.21e-09,32;CL:0002032,5.21e-09,32;CL:0000037,5.21e-09,32;CL:0000837,5.21e-09,32;CL:0000050,9.86e-09,9;CL:0000838,9.73e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003408!8.69e-15!24;UBERON:0002193!1.31e-14!48;UBERON:0002370!2.79e-13!23;UBERON:0000974!2.79e-13!23;UBERON:0004807!2.79e-13!23;UBERON:0005058!2.79e-13!23;UBERON:0003351!2.79e-13!23;UBERON:0009113!2.79e-13!23;UBERON:0003295!2.79e-13!23;UBERON:0009722!2.79e-13!23;UBERON:0005562!2.79e-13!23;UBERON:0007690!2.79e-13!23;UBERON:0004177!4.02e-13!29;UBERON:0006562!1.35e-12!24;UBERON:0001557!1.35e-12!24;UBERON:0001042!1.35e-12!24;UBERON:0008814!1.35e-12!24;UBERON:0009145!1.35e-12!24;UBERON:0002390!2.24e-11!45;UBERON:0003061!2.24e-11!45;UBERON:0000072!7.58e-11!27;UBERON:0002405!1.84e-10!70;UBERON:0001004!2.90e-09!42;UBERON:0000065!3.08e-08!41;UBERON:0003929!3.13e-08!55;UBERON:0005057!6.32e-08!51;UBERON:0000063!1.13e-07!35;UBERON:0005911!2.49e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.43e-11,45;UBERON:0003061,8.43e-11,45;UBERON:0002193,4.31e-10,48;UBERON:0002405,4.31e-10,48;UBERON:0002370,1.38e-08,23;UBERON:0000974,1.38e-08,23;UBERON:0004807,1.38e-08,23;UBERON:0005058,1.38e-08,23;UBERON:0003351,1.38e-08,23;UBERON:0009113,1.38e-08,23;UBERON:0003295,1.38e-08,23;UBERON:0009722,1.38e-08,23;UBERON:0005562,1.38e-08,23;UBERON:0007690,1.38e-08,23;UBERON:0006562,3.14e-08,24;UBERON:0003408,3.14e-08,24;UBERON:0001557,3.14e-08,24;UBERON:0001042,3.14e-08,24;UBERON:0008814,3.14e-08,24;UBERON:0009145,3.14e-08,24;UBERON:0000072,2.58e-07,27;UBERON:0004177,8.26e-07,29;UBERON:0005057,8.26e-07,29|phase1_expression=0,0,0,0.30246421130683,0,0,0,1.54947988129892,0,0,0,0,0.342401459862411,0.174840804837995,0,0,0,2.99689057090326,3.70208970735495,1.27316895539409,0,0,0,0.159992422793407,0.45881856213434,0,0,0.430942465371778,0,0,0,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71130424230945,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0.509935289981566,0.559805809294632,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0.179026695667481,1.58945083825012,0.961563596159751,1.32920574457119,1.00966449948148,0.914481679859998,0.806609481094724,0.584747284438515,0.865906574762965,1.5193997283604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:86013334..86013346,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=48 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:86013334..86013346,+ | |||
|description=CAGE_peak_at_chr15:86013334..86013346,+ | |||
|id=chr15:86013334..86013346,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.35e-13,6;CL:0000556,8.35e-13,6;CL:0002031,1.37e-11,25;CL:0000945,9.82e-10,1;CL:0000236,9.82e-10,1;CL:0000826,9.82e-10,1;CL:0000625,1.73e-09,1;CL:0000815,2.52e-09,1;CL:0000792,2.52e-09,1;CL:0000988,5.21e-09,32;CL:0002032,5.21e-09,32;CL:0000037,5.21e-09,32;CL:0000837,5.21e-09,32;CL:0000050,9.86e-09,9;CL:0000838,9.73e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!8.69e-15!24;UBERON:0002193!1.31e-14!48;UBERON:0002370!2.79e-13!23;UBERON:0000974!2.79e-13!23;UBERON:0004807!2.79e-13!23;UBERON:0005058!2.79e-13!23;UBERON:0003351!2.79e-13!23;UBERON:0009113!2.79e-13!23;UBERON:0003295!2.79e-13!23;UBERON:0009722!2.79e-13!23;UBERON:0005562!2.79e-13!23;UBERON:0007690!2.79e-13!23;UBERON:0004177!4.02e-13!29;UBERON:0006562!1.35e-12!24;UBERON:0001557!1.35e-12!24;UBERON:0001042!1.35e-12!24;UBERON:0008814!1.35e-12!24;UBERON:0009145!1.35e-12!24;UBERON:0002390!2.24e-11!45;UBERON:0003061!2.24e-11!45;UBERON:0000072!7.58e-11!27;UBERON:0002405!1.84e-10!70;UBERON:0001004!2.90e-09!42;UBERON:0000065!3.08e-08!41;UBERON:0003929!3.13e-08!55;UBERON:0005057!6.32e-08!51;UBERON:0000063!1.13e-07!35;UBERON:0005911!2.49e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.43e-11,45;UBERON:0003061,8.43e-11,45;UBERON:0002193,4.31e-10,48;UBERON:0002405,4.31e-10,48;UBERON:0002370,1.38e-08,23;UBERON:0000974,1.38e-08,23;UBERON:0004807,1.38e-08,23;UBERON:0005058,1.38e-08,23;UBERON:0003351,1.38e-08,23;UBERON:0009113,1.38e-08,23;UBERON:0003295,1.38e-08,23;UBERON:0009722,1.38e-08,23;UBERON:0005562,1.38e-08,23;UBERON:0007690,1.38e-08,23;UBERON:0006562,3.14e-08,24;UBERON:0003408,3.14e-08,24;UBERON:0001557,3.14e-08,24;UBERON:0001042,3.14e-08,24;UBERON:0008814,3.14e-08,24;UBERON:0009145,3.14e-08,24;UBERON:0000072,2.58e-07,27;UBERON:0004177,8.26e-07,29;UBERON:0005057,8.26e-07,29 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,1.54947988129892,0,0,0,0,0.342401459862411,0.174840804837995,0,0,0,2.99689057090326,3.70208970735495,1.27316895539409,0,0,0,0.159992422793407,0.45881856213434,0,0,0.430942465371778,0,0,0,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71130424230945,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0.509935289981566,0.559805809294632,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0.179026695667481,1.58945083825012,0.961563596159751,1.32920574457119,1.00966449948148,0.914481679859998,0.806609481094724,0.584747284438515,0.865906574762965,1.5193997283604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:86013334..86013346,+ | |||
}} | |||
Latest revision as of 19:20, 5 August 2015
| Short description: | p@chr15:86013334..86013346, + |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr15:86013334..86013346, + |
| Coexpression cluster: | MCL_coexpression_mm9:48 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| megakaryocyte progenitor cell | 8.35e-13 | 6 |
| megakaryocyte | 8.35e-13 | 6 |
| hematopoietic lineage restricted progenitor cell | 1.37e-11 | 25 |
| lymphocyte of B lineage | 9.82e-10 | 1 |
| B cell | 9.82e-10 | 1 |
| pro-B cell | 9.82e-10 | 1 |
| CD8-positive, alpha-beta T cell | 1.73e-09 | 1 |
| regulatory T cell | 2.52e-09 | 1 |
| CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.52e-09 | 1 |
| hematopoietic cell | 5.21e-09 | 32 |
| hematopoietic oligopotent progenitor cell | 5.21e-09 | 32 |
| hematopoietic stem cell | 5.21e-09 | 32 |
| hematopoietic multipotent progenitor cell | 5.21e-09 | 32 |
| megakaryocyte-erythroid progenitor cell | 9.86e-09 | 9 |
| lymphoid lineage restricted progenitor cell | 9.73e-07 | 12 |
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 8.43e-11 | 45 |
| blood island | 8.43e-11 | 45 |
| hemolymphoid system | 4.31e-10 | 48 |
| immune system | 4.31e-10 | 48 |
| thymus | 1.38e-08 | 23 |
| neck | 1.38e-08 | 23 |
| respiratory system epithelium | 1.38e-08 | 23 |
| hemolymphoid system gland | 1.38e-08 | 23 |
| pharyngeal epithelium | 1.38e-08 | 23 |
| thymic region | 1.38e-08 | 23 |
| pharyngeal gland | 1.38e-08 | 23 |
| entire pharyngeal arch endoderm | 1.38e-08 | 23 |
| thymus primordium | 1.38e-08 | 23 |
| early pharyngeal endoderm | 1.38e-08 | 23 |
| pharynx | 3.14e-08 | 24 |
| gland of gut | 3.14e-08 | 24 |
| upper respiratory tract | 3.14e-08 | 24 |
| chordate pharynx | 3.14e-08 | 24 |
| pharyngeal arch system | 3.14e-08 | 24 |
| pharyngeal region of foregut | 3.14e-08 | 24 |
| segment of respiratory tract | 2.58e-07 | 27 |
| hemopoietic organ | 8.26e-07 | 29 |
| immune organ | 8.26e-07 | 29 |