FFCP PHASE1:Mm9::chrM:15630..15667,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1856|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrM:15630..15667,-|id=chrM:15630..15667,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!4.64e-08!10;UBERON:0000411!4.64e-08!10;UBERON:0001950!4.64e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.89e-19,10;UBERON:0000411,8.89e-19,10;UBERON:0001950,8.89e-19,10;UBERON:0002619,5.19e-10,17;UBERON:0000956,1.19e-07,21;UBERON:0001869,1.19e-07,21;UBERON:0000203,1.19e-07,21;UBERON:0003528,1.76e-07,29;UBERON:0002791,1.76e-07,29;UBERON:0001893,1.76e-07,29;UBERON:0010314,4.34e-07,92;UBERON:0002780,9.99e-07,39;UBERON:0001890,9.99e-07,39;UBERON:0006240,9.99e-07,39|phase1_expression=0,0,0,0.30246421130683,0,0,0,0.129123323441576,0,0.468129052643987,0.171217968225505,0,0.513602189793617,0.34968160967599,0.333109761815663,0.202475267389826,0,0.788655413395594,0.548457734422955,0.84877930359606,0.510259740906419,0.297872853602656,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0.61506478758457,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.550640256485045,0,0.218025156380447,0,0,0,0,0,0,0,0.514518872071894,0.573066879877513,1.03134418455488,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.441737081903227,0,0,0,0,0.638436690425939,0.768032666281217,0,0.274462930807229,0,0.837548997004143,6.19038871034848,9.62628960993904,0.294628585473668,0,0,0,0.377857800533928,0.289864488701678,0,0,3.2382191498269,0.649776417447669,0.448026887097336,0.280888840263504,0.170430322578058,0,0.70667914902068,0,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,1.29347577849275,0.753999547978053,0,0.578397427679647,0,0.485300549842228,0.441683036920787,5.33362778448744,0,0.585561594023094,0.209446706813455,0,0,0,0,0.748953197024114,0.915001205637253,0.125654352112864,0.347648640384553,1.02286182932132,1.24672826735736,0.973447578406546,0.101839363850316,0.248813941220186,1.26361379216837,0.420883711772948,0.260240885925407,0,0,1.35634336052144,0.340182495756639,0,0,0.776110112217047,0.215567992932842,0.189106080167819,0.527853372491847,0,0,0.348252166522167,0,0.59710280045548,0,0,0.284163499395593,0,0.234526059981096,0.720248245844059,0,0.590292695242212,1.07986979021165,2.09280550275367,0.536546802799238,9.10769670463922,2.63295759861569,0.492502392237286,0.0810688095458557,2.48539978623065,4.83010253640311,1.07365135008297,0.420579897128254,0.205809224758569,1.98251269790279,0,0.853153002140936,0.464473343720877,0.38660238396628,1.00841762311671,0.444756087689741,0,0.474529061544512,0.329397909448022,0.251335208800269,0.994782360205754,0.58489226135736,1.79763881730844,0.432276099749388,0.398282546508734,0,0.228497025219458,0,1.62921062276251,0.581857461502877,1.75339549725796,0.126473074248515,0,1.72698600625512,0.987177311374404,0,0.333690211432188,0.393117990226406,0,0,0.241177159752417,0.50925170356284,0,0.486405680325106,0,7.18841032636773,1.86070473834252,1.24815069245824,3.28352541331245,0.538192240565737,0,0.923765950833023,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0,0.8858587585951,0,0.81931657357869,0.518054945597687,0.144649058581512,0,1.08781136763742,0,0,0.963303539926752,0.468846746368813,1.3114795630134,1.00988370881749,0.315508219416257,0,1.07711698866399,0.238968797952552,0.891194696329576,0,0.404810701674894,0,0,3.85585579706168,0.567760340833074,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0.604647113929502,0.377210159511796,0,0,0,0,0.356497378384721,0.632073515871632,0,3.09406629744561,3.40439605753788,0.36012218806262,0,0,0,0.356737635204141,0.164549020602121,0,0.704015124191131,0,0.220528398054962,0.98931751764888,0.161464426695906,0.0603129249281559,0.477489376012546,0.164140899745061,0,2.41052892613663,0,0,0.555583582109135,0.753473828018764,0.136694227721025,0.228778173206523,0.169978429993855,0.419854356970974,0.138199973804424,4.77335309007557,0,0.203319467126849,0.540026704109006,0.418176592028937,0.218362563746178,0.404593039154462,1.1571483801547,0.26175594198403,0.648074866458964,0.621339313086926,0.56369293868419,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0.821500670520278,0.13020438484395,0.209718688851422,0.724752362478018,0,0,0,0.410843828659309,0.77952493786677,0.537080087002444,0.198681354781265,0.240390899039938,0.443068581523732,0.100966449948148,0.457240839929999,0.907435666231565,0.292373642219257,0.673482891482306,0.116876902181569,0.680191150845634,0,0.179427713218951,0.335769232728157,0.19318959403219,0,0.183151624267265,0,1.00314420807073,3.3885110557024,5.52390283808612,5.72895513439397,2.92150409984269,5.48066015816514,5.2877572817279,5.40018000185445,7.65546045481175,4.53142408984205,3.62432218226274,1.66059756134683,0,0,0,0.419226325255965,0.367687016900028,0.44449345560323,0,0.320919209591815,1.01078884705519,0.760437899670719,0.943131706930381,0.842773567228942,0.448176066834085,0.918967503289812,0.952587382566147,0.347652977834566,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,2.8396128985494,0.953744759789284,1.59881058295561,0.564656282491984,0.761531471025089,0.73171189149109,1.31534855718921,0.814824683075171,0,0.355905054372522,0.985044823755635,0.409231043169689,0.309873682371932,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p@chrM:15630..15667,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1856 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrM:15630..15667,- | |||
|description=CAGE_peak_at_chrM:15630..15667,- | |||
|id=chrM:15630..15667,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!4.64e-08!10;UBERON:0000411!4.64e-08!10;UBERON:0001950!4.64e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.89e-19,10;UBERON:0000411,8.89e-19,10;UBERON:0001950,8.89e-19,10;UBERON:0002619,5.19e-10,17;UBERON:0000956,1.19e-07,21;UBERON:0001869,1.19e-07,21;UBERON:0000203,1.19e-07,21;UBERON:0003528,1.76e-07,29;UBERON:0002791,1.76e-07,29;UBERON:0001893,1.76e-07,29;UBERON:0010314,4.34e-07,92;UBERON:0002780,9.99e-07,39;UBERON:0001890,9.99e-07,39;UBERON:0006240,9.99e-07,39 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0.129123323441576,0,0.468129052643987,0.171217968225505,0,0.513602189793617,0.34968160967599,0.333109761815663,0.202475267389826,0,0.788655413395594,0.548457734422955,0.84877930359606,0.510259740906419,0.297872853602656,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0.61506478758457,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.550640256485045,0,0.218025156380447,0,0,0,0,0,0,0,0.514518872071894,0.573066879877513,1.03134418455488,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.441737081903227,0,0,0,0,0.638436690425939,0.768032666281217,0,0.274462930807229,0,0.837548997004143,6.19038871034848,9.62628960993904,0.294628585473668,0,0,0,0.377857800533928,0.289864488701678,0,0,3.2382191498269,0.649776417447669,0.448026887097336,0.280888840263504,0.170430322578058,0,0.70667914902068,0,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,1.29347577849275,0.753999547978053,0,0.578397427679647,0,0.485300549842228,0.441683036920787,5.33362778448744,0,0.585561594023094,0.209446706813455,0,0,0,0,0.748953197024114,0.915001205637253,0.125654352112864,0.347648640384553,1.02286182932132,1.24672826735736,0.973447578406546,0.101839363850316,0.248813941220186,1.26361379216837,0.420883711772948,0.260240885925407,0,0,1.35634336052144,0.340182495756639,0,0,0.776110112217047,0.215567992932842,0.189106080167819,0.527853372491847,0,0,0.348252166522167,0,0.59710280045548,0,0,0.284163499395593,0,0.234526059981096,0.720248245844059,0,0.590292695242212,1.07986979021165,2.09280550275367,0.536546802799238,9.10769670463922,2.63295759861569,0.492502392237286,0.0810688095458557,2.48539978623065,4.83010253640311,1.07365135008297,0.420579897128254,0.205809224758569,1.98251269790279,0,0.853153002140936,0.464473343720877,0.38660238396628,1.00841762311671,0.444756087689741,0,0.474529061544512,0.329397909448022,0.251335208800269,0.994782360205754,0.58489226135736,1.79763881730844,0.432276099749388,0.398282546508734,0,0.228497025219458,0,1.62921062276251,0.581857461502877,1.75339549725796,0.126473074248515,0,1.72698600625512,0.987177311374404,0,0.333690211432188,0.393117990226406,0,0,0.241177159752417,0.50925170356284,0,0.486405680325106,0,7.18841032636773,1.86070473834252,1.24815069245824,3.28352541331245,0.538192240565737,0,0.923765950833023,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0,0.8858587585951,0,0.81931657357869,0.518054945597687,0.144649058581512,0,1.08781136763742,0,0,0.963303539926752,0.468846746368813,1.3114795630134,1.00988370881749,0.315508219416257,0,1.07711698866399,0.238968797952552,0.891194696329576,0,0.404810701674894,0,0,3.85585579706168,0.567760340833074,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0.604647113929502,0.377210159511796,0,0,0,0,0.356497378384721,0.632073515871632,0,3.09406629744561,3.40439605753788,0.36012218806262,0,0,0,0.356737635204141,0.164549020602121,0,0.704015124191131,0,0.220528398054962,0.98931751764888,0.161464426695906,0.0603129249281559,0.477489376012546,0.164140899745061,0,2.41052892613663,0,0,0.555583582109135,0.753473828018764,0.136694227721025,0.228778173206523,0.169978429993855,0.419854356970974,0.138199973804424,4.77335309007557,0,0.203319467126849,0.540026704109006,0.418176592028937,0.218362563746178,0.404593039154462,1.1571483801547,0.26175594198403,0.648074866458964,0.621339313086926,0.56369293868419,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0.821500670520278,0.13020438484395,0.209718688851422,0.724752362478018,0,0,0,0.410843828659309,0.77952493786677,0.537080087002444,0.198681354781265,0.240390899039938,0.443068581523732,0.100966449948148,0.457240839929999,0.907435666231565,0.292373642219257,0.673482891482306,0.116876902181569,0.680191150845634,0,0.179427713218951,0.335769232728157,0.19318959403219,0,0.183151624267265,0,1.00314420807073,3.3885110557024,5.52390283808612,5.72895513439397,2.92150409984269,5.48066015816514,5.2877572817279,5.40018000185445,7.65546045481175,4.53142408984205,3.62432218226274,1.66059756134683,0,0,0,0.419226325255965,0.367687016900028,0.44449345560323,0,0.320919209591815,1.01078884705519,0.760437899670719,0.943131706930381,0.842773567228942,0.448176066834085,0.918967503289812,0.952587382566147,0.347652977834566,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,2.8396128985494,0.953744759789284,1.59881058295561,0.564656282491984,0.761531471025089,0.73171189149109,1.31534855718921,0.814824683075171,0,0.355905054372522,0.985044823755635,0.409231043169689,0.309873682371932,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chrM:15630..15667,- | |||
}} |
Latest revision as of 20:56, 5 August 2015
Short description: | p@chrM:15630..15667, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrM:15630..15667, - |
Coexpression cluster: | MCL_coexpression_mm9:1856 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 8.89e-19 | 10 |
visual cortex | 8.89e-19 | 10 |
neocortex | 8.89e-19 | 10 |
regional part of cerebral cortex | 5.19e-10 | 17 |
cerebral cortex | 1.19e-07 | 21 |
cerebral hemisphere | 1.19e-07 | 21 |
pallium | 1.19e-07 | 21 |
brain grey matter | 1.76e-07 | 29 |
regional part of telencephalon | 1.76e-07 | 29 |
telencephalon | 1.76e-07 | 29 |
structure with developmental contribution from neural crest | 4.34e-07 | 92 |
regional part of forebrain | 9.99e-07 | 39 |
forebrain | 9.99e-07 | 39 |
future forebrain | 9.99e-07 | 39 |