FFCP PHASE1:Mm9::chr6:72943582..72943617,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=285|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:72943582..72943617,+|id=chr6:72943582..72943617,+|ontology_enrichment_celltype=CL:0002031!1.32e-09!25;CL:0000791!1.58e-09!9;CL:0000789!1.58e-09!9;CL:0002420!1.58e-09!9;CL:0002419!1.58e-09!9;CL:0000790!1.58e-09!9;CL:0000624!3.59e-08!8;CL:0000084!1.84e-07!11;CL:0000827!1.84e-07!11;CL:0000050!5.00e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,9.99e-11,9;CL:0000789,9.99e-11,9;CL:0002420,9.99e-11,9;CL:0002419,9.99e-11,9;CL:0000790,9.99e-11,9;CL:0000084,1.02e-08,11;CL:0000827,1.02e-08,11;CL:0002031,1.61e-08,25;CL:0000624,4.82e-08,8;CL:0000838,5.76e-08,12;CL:0000542,2.50e-07,13;CL:0000051,2.50e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.12e-15!29;UBERON:0002193!4.07e-15!48;UBERON:0002390!9.61e-14!45;UBERON:0003061!9.61e-14!45;UBERON:0002370!1.51e-12!23;UBERON:0000974!1.51e-12!23;UBERON:0004807!1.51e-12!23;UBERON:0005058!1.51e-12!23;UBERON:0003351!1.51e-12!23;UBERON:0009113!1.51e-12!23;UBERON:0003295!1.51e-12!23;UBERON:0009722!1.51e-12!23;UBERON:0005562!1.51e-12!23;UBERON:0007690!1.51e-12!23;UBERON:0000065!2.08e-12!41;UBERON:0001004!5.92e-12!42;UBERON:0006562!7.90e-12!24;UBERON:0003408!7.90e-12!24;UBERON:0001557!7.90e-12!24;UBERON:0001042!7.90e-12!24;UBERON:0008814!7.90e-12!24;UBERON:0009145!7.90e-12!24;UBERON:0000072!5.28e-10!27;UBERON:0000077!6.17e-10!97;UBERON:0001041!2.42e-09!92;UBERON:0002405!9.97e-09!70;UBERON:0003081!8.12e-08!88;UBERON:0004119!1.11e-07!130;UBERON:0000925!1.11e-07!130;UBERON:0006595!1.11e-07!130;UBERON:0001007!2.65e-07!128;UBERON:0001555!2.65e-07!128;UBERON:0007026!2.65e-07!128;UBERON:0005057!5.03e-07!51;UBERON:0004921!5.26e-07!126;UBERON:0004185!5.26e-07!126;UBERON:0000063!9.97e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.38e-21,29;UBERON:0005057,1.38e-21,29;UBERON:0002193,5.63e-21,48;UBERON:0002405,5.63e-21,48;UBERON:0002390,8.85e-20,45;UBERON:0003061,8.85e-20,45;UBERON:0000077,1.95e-17,35;UBERON:0002370,2.82e-17,23;UBERON:0000974,2.82e-17,23;UBERON:0004807,2.82e-17,23;UBERON:0005058,2.82e-17,23;UBERON:0003351,2.82e-17,23;UBERON:0009113,2.82e-17,23;UBERON:0003295,2.82e-17,23;UBERON:0009722,2.82e-17,23;UBERON:0005562,2.82e-17,23;UBERON:0007690,2.82e-17,23;UBERON:0006562,1.78e-16,24;UBERON:0003408,1.78e-16,24;UBERON:0001557,1.78e-16,24;UBERON:0001042,1.78e-16,24;UBERON:0008814,1.78e-16,24;UBERON:0009145,1.78e-16,24;UBERON:0007811,8.90e-15,36;UBERON:0000072,1.99e-14,27;UBERON:0000153,5.67e-12,43;UBERON:0000065,1.65e-10,41;UBERON:0001004,3.30e-10,42;UBERON:0003081,1.12e-08,87;UBERON:0001041,2.41e-08,80|phase1_expression=0,0,0,0,0,0,0,7.48915275961142,0.422366166455,0,0.171217968225505,0.0797721589953364,14.7232627740837,11.4520727168887,0.333109761815663,0.404950534779652,0,1.89277299214943,2.60517423850904,2.12194825899015,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.97898356212479,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,28.7421050848361,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,10.1012090825508,0,0,0,0,0,0,0,2.06962696591213,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0.478364305972461,1.14704320301017,0.690739927463582,0.723245292907558,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0,0,0,0,0,0.291480836629851,0,2.05045056957423,0,0,0.376736914009382,1.6403307326523,1.37266903923914,0,0,0,1.90934123603023,0,0,0.108005340821801,0.418176592028937,0,0.809186078308924,0.578574190077352,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,2.52808896502543,0,0,0.25984164595559,0,0.198681354781265,3.00488623799922,3.10148007066612,1.81739609906666,1.67654974641,2.21817607301049,1.75424185331554,3.17499077413087,3.85693777199178,0,0.221985953374065,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr6:72943582..72943617,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=285 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:72943582..72943617,+ | |||
|description=CAGE_peak_at_chr6:72943582..72943617,+ | |||
|id=chr6:72943582..72943617,+ | |||
|ontology_enrichment_celltype=CL:0002031!1.32e-09!25;CL:0000791!1.58e-09!9;CL:0000789!1.58e-09!9;CL:0002420!1.58e-09!9;CL:0002419!1.58e-09!9;CL:0000790!1.58e-09!9;CL:0000624!3.59e-08!8;CL:0000084!1.84e-07!11;CL:0000827!1.84e-07!11;CL:0000050!5.00e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.99e-11,9;CL:0000789,9.99e-11,9;CL:0002420,9.99e-11,9;CL:0002419,9.99e-11,9;CL:0000790,9.99e-11,9;CL:0000084,1.02e-08,11;CL:0000827,1.02e-08,11;CL:0002031,1.61e-08,25;CL:0000624,4.82e-08,8;CL:0000838,5.76e-08,12;CL:0000542,2.50e-07,13;CL:0000051,2.50e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.12e-15!29;UBERON:0002193!4.07e-15!48;UBERON:0002390!9.61e-14!45;UBERON:0003061!9.61e-14!45;UBERON:0002370!1.51e-12!23;UBERON:0000974!1.51e-12!23;UBERON:0004807!1.51e-12!23;UBERON:0005058!1.51e-12!23;UBERON:0003351!1.51e-12!23;UBERON:0009113!1.51e-12!23;UBERON:0003295!1.51e-12!23;UBERON:0009722!1.51e-12!23;UBERON:0005562!1.51e-12!23;UBERON:0007690!1.51e-12!23;UBERON:0000065!2.08e-12!41;UBERON:0001004!5.92e-12!42;UBERON:0006562!7.90e-12!24;UBERON:0003408!7.90e-12!24;UBERON:0001557!7.90e-12!24;UBERON:0001042!7.90e-12!24;UBERON:0008814!7.90e-12!24;UBERON:0009145!7.90e-12!24;UBERON:0000072!5.28e-10!27;UBERON:0000077!6.17e-10!97;UBERON:0001041!2.42e-09!92;UBERON:0002405!9.97e-09!70;UBERON:0003081!8.12e-08!88;UBERON:0004119!1.11e-07!130;UBERON:0000925!1.11e-07!130;UBERON:0006595!1.11e-07!130;UBERON:0001007!2.65e-07!128;UBERON:0001555!2.65e-07!128;UBERON:0007026!2.65e-07!128;UBERON:0005057!5.03e-07!51;UBERON:0004921!5.26e-07!126;UBERON:0004185!5.26e-07!126;UBERON:0000063!9.97e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.38e-21,29;UBERON:0005057,1.38e-21,29;UBERON:0002193,5.63e-21,48;UBERON:0002405,5.63e-21,48;UBERON:0002390,8.85e-20,45;UBERON:0003061,8.85e-20,45;UBERON:0000077,1.95e-17,35;UBERON:0002370,2.82e-17,23;UBERON:0000974,2.82e-17,23;UBERON:0004807,2.82e-17,23;UBERON:0005058,2.82e-17,23;UBERON:0003351,2.82e-17,23;UBERON:0009113,2.82e-17,23;UBERON:0003295,2.82e-17,23;UBERON:0009722,2.82e-17,23;UBERON:0005562,2.82e-17,23;UBERON:0007690,2.82e-17,23;UBERON:0006562,1.78e-16,24;UBERON:0003408,1.78e-16,24;UBERON:0001557,1.78e-16,24;UBERON:0001042,1.78e-16,24;UBERON:0008814,1.78e-16,24;UBERON:0009145,1.78e-16,24;UBERON:0007811,8.90e-15,36;UBERON:0000072,1.99e-14,27;UBERON:0000153,5.67e-12,43;UBERON:0000065,1.65e-10,41;UBERON:0001004,3.30e-10,42;UBERON:0003081,1.12e-08,87;UBERON:0001041,2.41e-08,80 | |||
|phase1_expression=0,0,0,0,0,0,0,7.48915275961142,0.422366166455,0,0.171217968225505,0.0797721589953364,14.7232627740837,11.4520727168887,0.333109761815663,0.404950534779652,0,1.89277299214943,2.60517423850904,2.12194825899015,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.97898356212479,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,28.7421050848361,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,10.1012090825508,0,0,0,0,0,0,0,2.06962696591213,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0.478364305972461,1.14704320301017,0.690739927463582,0.723245292907558,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0,0,0,0,0,0.291480836629851,0,2.05045056957423,0,0,0.376736914009382,1.6403307326523,1.37266903923914,0,0,0,1.90934123603023,0,0,0.108005340821801,0.418176592028937,0,0.809186078308924,0.578574190077352,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,2.52808896502543,0,0,0.25984164595559,0,0.198681354781265,3.00488623799922,3.10148007066612,1.81739609906666,1.67654974641,2.21817607301049,1.75424185331554,3.17499077413087,3.85693777199178,0,0.221985953374065,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr6:72943582..72943617,+ | |||
}} |
Latest revision as of 03:08, 6 August 2015
Short description: | p@chr6:72943582..72943617, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:72943582..72943617, + |
Coexpression cluster: | MCL_coexpression_mm9:285 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.99e-11 | 9 |
alpha-beta T cell | 9.99e-11 | 9 |
immature T cell | 9.99e-11 | 9 |
mature T cell | 9.99e-11 | 9 |
immature alpha-beta T cell | 9.99e-11 | 9 |
T cell | 1.02e-08 | 11 |
pro-T cell | 1.02e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 1.61e-08 | 25 |
CD4-positive, alpha-beta T cell | 4.82e-08 | 8 |
lymphoid lineage restricted progenitor cell | 5.76e-08 | 12 |
lymphocyte | 2.50e-07 | 13 |
common lymphoid progenitor | 2.50e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.38e-21 | 29 |
immune organ | 1.38e-21 | 29 |
hemolymphoid system | 5.63e-21 | 48 |
immune system | 5.63e-21 | 48 |
hematopoietic system | 8.85e-20 | 45 |
blood island | 8.85e-20 | 45 |
mixed endoderm/mesoderm-derived structure | 1.95e-17 | 35 |
thymus | 2.82e-17 | 23 |
neck | 2.82e-17 | 23 |
respiratory system epithelium | 2.82e-17 | 23 |
hemolymphoid system gland | 2.82e-17 | 23 |
pharyngeal epithelium | 2.82e-17 | 23 |
thymic region | 2.82e-17 | 23 |
pharyngeal gland | 2.82e-17 | 23 |
entire pharyngeal arch endoderm | 2.82e-17 | 23 |
thymus primordium | 2.82e-17 | 23 |
early pharyngeal endoderm | 2.82e-17 | 23 |
pharynx | 1.78e-16 | 24 |
gland of gut | 1.78e-16 | 24 |
upper respiratory tract | 1.78e-16 | 24 |
chordate pharynx | 1.78e-16 | 24 |
pharyngeal arch system | 1.78e-16 | 24 |
pharyngeal region of foregut | 1.78e-16 | 24 |
craniocervical region | 8.90e-15 | 36 |
segment of respiratory tract | 1.99e-14 | 27 |
anterior region of body | 5.67e-12 | 43 |
respiratory tract | 1.65e-10 | 41 |
respiratory system | 3.30e-10 | 42 |
lateral plate mesoderm | 1.12e-08 | 87 |
foregut | 2.41e-08 | 80 |