FFCP PHASE2:Hg19::chr10:120789223..120789231,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:340719 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:23044 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=340719 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=23044 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8WY41 | ||
|association_with_transcript=0bp_to_ENST00000425699,NM_199461,uc009xzf.1_5end | |association_with_transcript=0bp_to_ENST00000425699,NM_199461,uc009xzf.1_5end | ||
|cluster_id=chr10:120789223..120789231,+ | |cluster_id=chr10:120789223..120789231,+ | ||
Latest revision as of 16:35, 16 September 2015
| Short description: | p1@NANOS1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_NANOS1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000425699, NM_199461, uc009xzf.1_5end |
| EntrezGene: | NANOS1 |
| HGNC: | 23044 |
| UniProt: | Q8WY41 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@NANOS1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural plate | 7.87e-14 | 82 |
| presumptive neural plate | 7.87e-14 | 82 |
| ecto-epithelium | 2.14e-13 | 104 |
| neurectoderm | 5.20e-12 | 86 |
| ectoderm-derived structure | 3.64e-11 | 171 |
| ectoderm | 3.64e-11 | 171 |
| presumptive ectoderm | 3.64e-11 | 171 |
| central nervous system | 5.66e-10 | 81 |
| nervous system | 1.42e-09 | 89 |
| structure with developmental contribution from neural crest | 2.14e-09 | 132 |
Showing 1 to 10 of 21 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 1.78e-15 | 106 |
| cell type cancer | 8.74e-14 | 143 |
| cancer | 2.62e-09 | 235 |
| disease of cellular proliferation | 2.59e-08 | 239 |
Showing 1 to 4 of 4 entries
